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CmoCh17G002900 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G002900
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionBRCT domain-containing protein
Genome locationCmo_Chr17:1751798..1752310
RNA-Seq ExpressionCmoCh17G002900
SyntenyCmoCh17G002900
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575044.1 PAX-interacting protein 1, partial [Cucurbita argyrosperma subsp. sororia]9.0e-0793.33Show/hide
Query:  HRLFVDHVKRTRSTIWLKKGGNKFHPVTKR
        HRLFVDHVKRTRSTIWLKK GNKFHPV KR
Subjt:  HRLFVDHVKRTRSTIWLKKGGNKFHPVTKR
KAG7013618.1 PAX-interacting protein 1 [Cucurbita argyrosperma subsp. argyrosperma]9.6e-09100Show/hide
Query:  HRLFVDHVKRTRSTIWLKKGGNKFHPVTKRR
        HRLFVDHVKRTRSTIWLKKGGNKFHPVTKRR
Subjt:  HRLFVDHVKRTRSTIWLKKGGNKFHPVTKRR
XP_022138630.1 uncharacterized protein LOC111009745 [Momordica charantia]2.6e-0687.1Show/hide
Query:  HRLFVDHVKRTRSTIWLKKGGNKFHPVTKRR
        HRLFVDHVKRTRSTIWLKK GNKFHPV K +
Subjt:  HRLFVDHVKRTRSTIWLKKGGNKFHPVTKRR
XP_022959464.1 uncharacterized protein LOC111460430 [Cucurbita moschata]9.6e-09100Show/hide
Query:  HRLFVDHVKRTRSTIWLKKGGNKFHPVTKRR
        HRLFVDHVKRTRSTIWLKKGGNKFHPVTKRR
Subjt:  HRLFVDHVKRTRSTIWLKKGGNKFHPVTKRR
XP_023006007.1 uncharacterized protein LOC111498885 [Cucurbita maxima]3.7e-0896.77Show/hide
Query:  HRLFVDHVKRTRSTIWLKKGGNKFHPVTKRR
        HRLFVDHVKRTRSTIWLKKGGNKFHPVTK R
Subjt:  HRLFVDHVKRTRSTIWLKKGGNKFHPVTKRR
TrEMBL top hitse value%identityAlignment
A0A0A0KCR3 BRCT domain-containing protein4.8e-0683.87Show/hide
Query:  HRLFVDHVKRTRSTIWLKKGGNKFHPVTKRR
        HR+FVDHVKRTRSTIWLKK GNKF PVTK +
Subjt:  HRLFVDHVKRTRSTIWLKKGGNKFHPVTKRR
A0A5A7STY9 BRCT domain-containing protein8.2e-0680.65Show/hide
Query:  HRLFVDHVKRTRSTIWLKKGGNKFHPVTKRR
        HRLFVDH+KRTRSTIWLKK  NKF P+TKR+
Subjt:  HRLFVDHVKRTRSTIWLKKGGNKFHPVTKRR
A0A6J1CA00 uncharacterized protein LOC1110097451.3e-0687.1Show/hide
Query:  HRLFVDHVKRTRSTIWLKKGGNKFHPVTKRR
        HRLFVDHVKRTRSTIWLKK GNKFHPV K +
Subjt:  HRLFVDHVKRTRSTIWLKKGGNKFHPVTKRR
A0A6J1H849 uncharacterized protein LOC1114604304.7e-09100Show/hide
Query:  HRLFVDHVKRTRSTIWLKKGGNKFHPVTKRR
        HRLFVDHVKRTRSTIWLKKGGNKFHPVTKRR
Subjt:  HRLFVDHVKRTRSTIWLKKGGNKFHPVTKRR
A0A6J1KUR0 uncharacterized protein LOC1114988851.8e-0896.77Show/hide
Query:  HRLFVDHVKRTRSTIWLKKGGNKFHPVTKRR
        HRLFVDHVKRTRSTIWLKKGGNKFHPVTK R
Subjt:  HRLFVDHVKRTRSTIWLKKGGNKFHPVTKRR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G21480.1 BRCT domain-containing DNA repair protein2.6e-0470.83Show/hide
Query:  HRLFVDHVKRTRSTIWLKKGGNKF
        +RLF DHV+RTRSTIW+K G  KF
Subjt:  HRLFVDHVKRTRSTIWLKKGGNKF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCTTGACTGCTCAAATTTCTTTATAATAGAACGTTTGAGATTCAAAGTCATTTCAAATGAACTCTCAACCAACGATGAAATGAAGATCACATCCAAAAGCAATCA
AATATCATTTGATGCTCGTGTCCTAATATTACATCGTCTTTTTGTAGATCATGTCAAGAGGACTCGTTCGACGATATGGCTCAAGAAAGGTGGAAATAAGTTCCATCCTG
TTACCAAACGTCGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCTTGACTGCTCAAATTTCTTTATAATAGAACGTTTGAGATTCAAAGTCATTTCAAATGAACTCTCAACCAACGATGAAATGAAGATCACATCCAAAAGCAATCA
AATATCATTTGATGCTCGTGTCCTAATATTACATCGTCTTTTTGTAGATCATGTCAAGAGGACTCGTTCGACGATATGGCTCAAGAAAGGTGGAAATAAGTTCCATCCTG
TTACCAAACGTCGATAACTTCGTTACATAATCGTCTTGCAGTGTATAGTATATGGTTTTGATGTGCTCTATGTATTAGATTTCATAGTTTAATGTAAATGCTTAGGCTAA
TAGGGTAAGTGCATGTTATAATTTTATTTATTAATCTTATTATCATAAGGTTATGCAAAATGCAATTATATTTTTATTTATTTTATTATCGAGTAACTTAATGTAATGAT
GCGATT
Protein sequenceShow/hide protein sequence
MDLDCSNFFIIERLRFKVISNELSTNDEMKITSKSNQISFDARVLILHRLFVDHVKRTRSTIWLKKGGNKFHPVTKRR