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CmoCh17G003070 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G003070
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein SRC2-like
Genome locationCmo_Chr17:1867221..1867778
RNA-Seq ExpressionCmoCh17G003070
SyntenyCmoCh17G003070
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575060.1 hypothetical protein SDJN03_25699, partial [Cucurbita argyrosperma subsp. sororia]3.9e-9397.84Show/hide
Query:  MESSTTSSKDNAKPAAPYPTRGIGHPPEVYPPPPNYGGGYPPSGYAPPPPMPGYGGYPSPPPPYGAYPAPYNTGPYAPQAYGYPHHPPPPPAYVYGPPPP
        MESSTTSSKDNAKPAA YPTRGIGHPPEVYPPPPNYGGGYPP+GYAPPPPMPGYGGYPSPPPPYGAYPAPYNTGPYAPQAYGYPHHPPPPPAYVYGPPPP
Subjt:  MESSTTSSKDNAKPAAPYPTRGIGHPPEVYPPPPNYGGGYPPSGYAPPPPMPGYGGYPSPPPPYGAYPAPYNTGPYAPQAYGYPHHPPPPPAYVYGPPPP

Query:  GYPPATNAPTTGKKKKGMSKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFEFFSDATGGGFDQLCDARMQSASDSIDLLGTIG
        GYPPATNAPTTGKKKKG SKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFE FSDATGGGFDQLCDARMQSASDSIDLLGTIG
Subjt:  GYPPATNAPTTGKKKKGMSKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFEFFSDATGGGFDQLCDARMQSASDSIDLLGTIG

XP_022959345.1 protein SRC2-like [Cucurbita moschata]8.5e-96100Show/hide
Query:  MESSTTSSKDNAKPAAPYPTRGIGHPPEVYPPPPNYGGGYPPSGYAPPPPMPGYGGYPSPPPPYGAYPAPYNTGPYAPQAYGYPHHPPPPPAYVYGPPPP
        MESSTTSSKDNAKPAAPYPTRGIGHPPEVYPPPPNYGGGYPPSGYAPPPPMPGYGGYPSPPPPYGAYPAPYNTGPYAPQAYGYPHHPPPPPAYVYGPPPP
Subjt:  MESSTTSSKDNAKPAAPYPTRGIGHPPEVYPPPPNYGGGYPPSGYAPPPPMPGYGGYPSPPPPYGAYPAPYNTGPYAPQAYGYPHHPPPPPAYVYGPPPP

Query:  GYPPATNAPTTGKKKKGMSKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFEFFSDATGGGFDQLCDARMQSASDSIDLLGTIG
        GYPPATNAPTTGKKKKGMSKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFEFFSDATGGGFDQLCDARMQSASDSIDLLGTIG
Subjt:  GYPPATNAPTTGKKKKGMSKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFEFFSDATGGGFDQLCDARMQSASDSIDLLGTIG

XP_023006250.1 polyadenylation factor subunit 2-like [Cucurbita maxima]3.1e-9095.68Show/hide
Query:  MESSTTSSKDNAKPAAPYPTRGIGHPPEVYPPPPNYGGGYPPSGYAPPPPMPGYGGYPSPPPPYGAYPAPYNTGPYAPQAYGYPHHPPPPPAYVYGPPPP
        ME STTSSKDNAKPAA YPTRGIGHPPEVYPPPPNYGGGYPP+GYAPPPPMPGYGGYPSPPPPYGAYP PYNTGPYAPQAYGYPHHPPPPPAYVYGPP P
Subjt:  MESSTTSSKDNAKPAAPYPTRGIGHPPEVYPPPPNYGGGYPPSGYAPPPPMPGYGGYPSPPPPYGAYPAPYNTGPYAPQAYGYPHHPPPPPAYVYGPPPP

Query:  GYPPATNAPTTGKKKKGMSKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFEFFSDATGGGFDQLCDARMQSASDSIDLLGTIG
        GYPPATNAPTTGKKKKG SKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFE FSDATGGGFDQLCDARMQS SDSIDLLGTIG
Subjt:  GYPPATNAPTTGKKKKGMSKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFEFFSDATGGGFDQLCDARMQSASDSIDLLGTIG

XP_023548312.1 formin-like protein 20 [Cucurbita pepo subsp. pepo]1.2e-8995.65Show/hide
Query:  MESSTTSSKDNAKPAAPYPTRGIGHPPEVYPPPPNYGGGYPPSGYAPPPPMPGYGGYPSPPPPYGAYPAPYNTGPYAPQAYGYPHHPPPPPAYVYGPPPP
        MESSTTSSK NAKPAA YPTRGIGHPPE YPPPPNYGGGYPP+GYAPPPPMPGYGGYPSPPPPYGAYP PYNTGPYAPQAYGYPHHPPPPPAYVYGPPPP
Subjt:  MESSTTSSKDNAKPAAPYPTRGIGHPPEVYPPPPNYGGGYPPSGYAPPPPMPGYGGYPSPPPPYGAYPAPYNTGPYAPQAYGYPHHPPPPPAYVYGPPPP

Query:  GYPPATNAPTTGKKKKGMSKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFEFFSDATGGGFDQLCDARMQSASDSIDLLGTI
        GYPPATNAPTTGKKKKG SKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFE FSDATGGGFDQLCDARMQS SDSIDLLGTI
Subjt:  GYPPATNAPTTGKKKKGMSKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFEFFSDATGGGFDQLCDARMQSASDSIDLLGTI

XP_038875072.1 formin-like protein 20 [Benincasa hispida]7.5e-5270.05Show/hide
Query:  MESSTTSSKDNAKPAAPYPTRGIGHPPEVYPPPPNYGGGYPPSGYAPPPPMPGYGGYPSPPPPYGAYPAPYNTGPYA--PQAYGYPHHPPPPPAYVYGPP
        MESSTTS KDN KP A  PTRG      VYPPPP+YGGG+PP+GYAPPPPMPGYGG+ SPPPPY  +P PYN GPY   PQ YGYPHHPPPPPAY Y  P
Subjt:  MESSTTSSKDNAKPAAPYPTRGIGHPPEVYPPPPNYGGGYPPSGYAPPPPMPGYGGYPSPPPPYGAYPAPYNTGPYA--PQAYGYPHHPPPPPAYVYGPP

Query:  PPGYPPATNAPTTGKKKKGMSKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFEFFSDATGGGFDQLCDARMQSASDSIDLLGTIG
        PPG  PA NAPT  KKK GMSK+LG+GAGL    VGGLLLG+ AAD GA  PSF+ FSD TGGG     DA MQS SDS+DLLGTIG
Subjt:  PPGYPPATNAPTTGKKKKGMSKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFEFFSDATGGGFDQLCDARMQSASDSIDLLGTIG

TrEMBL top hitse value%identityAlignment
A0A6J1CB10 protein SRC2-like1.5e-1342.16Show/hide
Query:  STTSSKD-NAKPAAPYPTRGIGHPPEVYPPPPNYGGGYPPSGYAPPPPMPGYGGYPSPPPPYGAYPAPYNTG--PYAPQAYGYPHHPPPPPAYVYGPPPP
        +T S +D   KP A Y TRGIG PPE YPPPP+   GYPP                 PPPP      PYNTG  P  PQ YGYPH+  P       PPPP
Subjt:  STTSSKD-NAKPAAPYPTRGIGHPPEVYPPPPNYGGGYPPSGYAPPPPMPGYGGYPSPPPPYGAYPAPYNTG--PYAPQAYGYPHHPPPPPAYVYGPPPP

Query:  GYPPATNAPTTGKKKKGMSKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFEFFSDATGGGFDQLCDARMQSASDSIDLLGTIG
        GY PA       + K GM K+L +GAG+LGG+  G +LG+ AAD G   P     S   GG    +  +   S + S + LG IG
Subjt:  GYPPATNAPTTGKKKKGMSKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFEFFSDATGGGFDQLCDARMQSASDSIDLLGTIG

A0A6J1H610 protein SRC2-like4.1e-96100Show/hide
Query:  MESSTTSSKDNAKPAAPYPTRGIGHPPEVYPPPPNYGGGYPPSGYAPPPPMPGYGGYPSPPPPYGAYPAPYNTGPYAPQAYGYPHHPPPPPAYVYGPPPP
        MESSTTSSKDNAKPAAPYPTRGIGHPPEVYPPPPNYGGGYPPSGYAPPPPMPGYGGYPSPPPPYGAYPAPYNTGPYAPQAYGYPHHPPPPPAYVYGPPPP
Subjt:  MESSTTSSKDNAKPAAPYPTRGIGHPPEVYPPPPNYGGGYPPSGYAPPPPMPGYGGYPSPPPPYGAYPAPYNTGPYAPQAYGYPHHPPPPPAYVYGPPPP

Query:  GYPPATNAPTTGKKKKGMSKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFEFFSDATGGGFDQLCDARMQSASDSIDLLGTIG
        GYPPATNAPTTGKKKKGMSKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFEFFSDATGGGFDQLCDARMQSASDSIDLLGTIG
Subjt:  GYPPATNAPTTGKKKKGMSKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFEFFSDATGGGFDQLCDARMQSASDSIDLLGTIG

A0A6J1KZM6 polyadenylation factor subunit 2-like1.5e-9095.68Show/hide
Query:  MESSTTSSKDNAKPAAPYPTRGIGHPPEVYPPPPNYGGGYPPSGYAPPPPMPGYGGYPSPPPPYGAYPAPYNTGPYAPQAYGYPHHPPPPPAYVYGPPPP
        ME STTSSKDNAKPAA YPTRGIGHPPEVYPPPPNYGGGYPP+GYAPPPPMPGYGGYPSPPPPYGAYP PYNTGPYAPQAYGYPHHPPPPPAYVYGPP P
Subjt:  MESSTTSSKDNAKPAAPYPTRGIGHPPEVYPPPPNYGGGYPPSGYAPPPPMPGYGGYPSPPPPYGAYPAPYNTGPYAPQAYGYPHHPPPPPAYVYGPPPP

Query:  GYPPATNAPTTGKKKKGMSKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFEFFSDATGGGFDQLCDARMQSASDSIDLLGTIG
        GYPPATNAPTTGKKKKG SKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFE FSDATGGGFDQLCDARMQS SDSIDLLGTIG
Subjt:  GYPPATNAPTTGKKKKGMSKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFEFFSDATGGGFDQLCDARMQSASDSIDLLGTIG

A0A7J6VBR4 Src22.4e-1142.44Show/hide
Query:  AKPAAPYPTRGIGHPPEVYPPPPNYG--------------GGYPPSGYAPP-----PPMPGYGGYPSPPPPYGAYPAPYNTGPYAPQAYGYPHHPPPPPA
        A PA P P    G     YPPPP +G              GGYPP+GY PP     PP+ GYGGY   PP  G YP P   G Y PQ  GY         
Subjt:  AKPAAPYPTRGIGHPPEVYPPPPNYG--------------GGYPPSGYAPP-----PPMPGYGGYPSPPPPYGAYPAPYNTGPYAPQAYGYPHHPPPPPA

Query:  YVYGPPPPGYPPATNAPTTGKKKKGMSKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFEFFSDATGGGFD
                GYPP    P   K K GM    GLGAGLLGG +GGLL+GD  +DAG     ++   D  GGGFD
Subjt:  YVYGPPPPGYPPATNAPTTGKKKKGMSKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFEFFSDATGGGFD

B9HSC2 C2 domain-containing protein4.8e-1246.43Show/hide
Query:  SSTTSSKDNAKPAAPYPTRGIGHP---PEVYPPPPNYGGGYPPSGYAPPPPMPGYGGYPSPPPPYGAYPAPYNTGPYAPQAYGYPHHPPPPPAYVYGPPP
        S+  ++  N++P A YP      P   P  YPP        PP+GY  PPP PGY GYP PPPPYG YP P       PQ YGY   PPPPP Y Y P  
Subjt:  SSTTSSKDNAKPAAPYPTRGIGHP---PEVYPPPPNYGGGYPPSGYAPPPPMPGYGGYPSPPPPYGAYPAPYNTGPYAPQAYGYPHHPPPPPAYVYGPPP

Query:  PGY---PPATNAPTTGKKKKGMSKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFEFFSDATGGGFD
         GY   PP        K K GM    GLGAGLLGG +GGLL+GD  +DA         F DA  GGFD
Subjt:  PGY---PPATNAPTTGKKKKGMSKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFEFFSDATGGGFD

SwissProt top hitse value%identityAlignment
O04133 Protein SRC24.6e-0439.26Show/hide
Query:  SSKDNAKPAAPYPTRGIGHPPEVY----PPPPNYGGGYPPSGYAPPPPMPGYGGYPSPPPPYGAYPAPYNTGPYAPQAYGYPHHPPPPPAYVYGPPPPGY
        ++K   +P   YP  G G     Y    PPPP     Y  +GY  PP    +GGY    PP  AY  P  TG   PQ  GY +  P    Y       GY
Subjt:  SSKDNAKPAAPYPTRGIGHPPEVY----PPPPNYGGGYPPSGYAPPPPMPGYGGYPSPPPPYGAYPAPYNTGPYAPQAYGYPHHPPPPPAYVYGPPPPGY

Query:  PPATNAPTTGKKKKGMSKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFEF-FSDATGGGFD
        PP    P   K K GM    GLGAGLLGG +GG+L+GD  +DA      ++  F DA  GGFD
Subjt:  PPATNAPTTGKKKKGMSKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFEF-FSDATGGGFD

Q54WH2 Formin-A3.5e-0444.17Show/hide
Query:  STTSSKDNAKPAAPYPTRGIGHPPEVYPPPPNYGGGYPPSGYAPPPPMPGYGGYPSPPPPYGAYPAPYNTG---PYAPQAYGYPHHPPPPPAYVYGPPPP
        S  +S   A P  P P  G G PP   PPPP  GGG PP    PPPP P  GG P PPPP    P P   G   P  P   G P  PPPPP    G PPP
Subjt:  STTSSKDNAKPAAPYPTRGIGHPPEVYPPPPNYGGGYPPSGYAPPPPMPGYGGYPSPPPPYGAYPAPYNTG---PYAPQAYGYPHHPPPPPAYVYGPPPP

Query:  GYPPATNAPTTGKKKKGMSK
          PP    P       GM K
Subjt:  GYPPATNAPTTGKKKKGMSK

Arabidopsis top hitse value%identityAlignment
AT3G16510.1 Calcium-dependent lipid-binding (CaLB domain) family protein3.3e-0536.67Show/hide
Query:  PTRGIGHPPEVYPPPPNYGGGYP--PSGYAPPPPMPGYGGYPSP-----PPPYGAYPAP--------------YNTGPYAPQ-AYGYPHHPPPPPAYVYG
        P +    PP  YP P  Y   YP  P    PPPP      YP P     PP + +YP P              +   P +PQ  +GY + PP  P Y YG
Subjt:  PTRGIGHPPEVYPPPPNYGGGYP--PSGYAPPPPMPGYGGYPSP-----PPPYGAYPAP--------------YNTGPYAPQ-AYGYPHHPPPPPAYVYG

Query:  PPPPGYPPATNAPTTGKKKKGMSKMLGLGAGLLGGVVGGLLLGDFAADAG
         P    PP  N       K G+   LG+GAGLLGG +GGLL+ D  +D G
Subjt:  PPPPGYPPATNAPTTGKKKKGMSKMLGLGAGLLGGVVGGLLLGDFAADAG

AT5G07740.1 actin binding6.2e-0446.94Show/hide
Query:  NAKPAAPYPTRGIGHPPEVYPPPPNYGGGYPPSGYAPPPPMPGYGGYPSPPPP---YGAYPAPYNTGPYAPQAYGYPHHPPPPP-AYVYGPPPPGYPP
        NA      P    G PP   PPPP+YG   PP    PPPP P YG  P PPPP   YG+ P P    P  P +YG P  PPPPP ++V   PPP  PP
Subjt:  NAKPAAPYPTRGIGHPPEVYPPPPNYGGGYPPSGYAPPPPMPGYGGYPSPPPP---YGAYPAPYNTGPYAPQAYGYPHHPPPPP-AYVYGPPPPGYPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCTTCAACGACGTCGTCTAAGGACAATGCAAAGCCAGCCGCCCCTTACCCCACCCGAGGAATCGGACATCCACCGGAGGTATATCCTCCACCGCCAAACTACGG
CGGCGGATATCCACCTTCAGGATATGCTCCGCCGCCTCCAATGCCTGGATACGGTGGATATCCGTCGCCGCCACCACCGTACGGCGCGTATCCAGCGCCGTACAACACTG
GGCCCTACGCTCCACAAGCCTACGGTTATCCACATCATCCGCCACCGCCGCCGGCTTATGTTTATGGTCCACCACCGCCGGGATATCCGCCGGCGACCAATGCTCCAACG
ACGGGTAAGAAGAAGAAAGGAATGAGTAAAATGCTTGGATTAGGAGCGGGGTTGCTCGGTGGAGTTGTCGGAGGGCTTTTGCTCGGCGATTTTGCGGCGGATGCTGGGGC
GGCAGCGCCGTCGTTTGAGTTTTTTTCCGATGCCACCGGCGGCGGATTTGATCAATTGTGCGATGCAAGGATGCAATCTGCGTCCGATAGCATTGATTTGCTCGGAACCA
TTGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCTTCAACGACGTCGTCTAAGGACAATGCAAAGCCAGCCGCCCCTTACCCCACCCGAGGAATCGGACATCCACCGGAGGTATATCCTCCACCGCCAAACTACGG
CGGCGGATATCCACCTTCAGGATATGCTCCGCCGCCTCCAATGCCTGGATACGGTGGATATCCGTCGCCGCCACCACCGTACGGCGCGTATCCAGCGCCGTACAACACTG
GGCCCTACGCTCCACAAGCCTACGGTTATCCACATCATCCGCCACCGCCGCCGGCTTATGTTTATGGTCCACCACCGCCGGGATATCCGCCGGCGACCAATGCTCCAACG
ACGGGTAAGAAGAAGAAAGGAATGAGTAAAATGCTTGGATTAGGAGCGGGGTTGCTCGGTGGAGTTGTCGGAGGGCTTTTGCTCGGCGATTTTGCGGCGGATGCTGGGGC
GGCAGCGCCGTCGTTTGAGTTTTTTTCCGATGCCACCGGCGGCGGATTTGATCAATTGTGCGATGCAAGGATGCAATCTGCGTCCGATAGCATTGATTTGCTCGGAACCA
TTGGCTGA
Protein sequenceShow/hide protein sequence
MESSTTSSKDNAKPAAPYPTRGIGHPPEVYPPPPNYGGGYPPSGYAPPPPMPGYGGYPSPPPPYGAYPAPYNTGPYAPQAYGYPHHPPPPPAYVYGPPPPGYPPATNAPT
TGKKKKGMSKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFEFFSDATGGGFDQLCDARMQSASDSIDLLGTIG