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CmoCh17G003080 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G003080
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionflowering-promoting factor 1-like protein 1
Genome locationCmo_Chr17:1872150..1872485
RNA-Seq ExpressionCmoCh17G003080
SyntenyCmoCh17G003080
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
InterPro domainsIPR039274 - Flowering-promoting factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013634.1 Flowering-promoting factor 1-like protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-5699.1Show/hide
Query:  MAGVWVFKNGVVRLVENAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIVV
        MAGVWVFKNGVVRLVENAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIVV
Subjt:  MAGVWVFKNGVVRLVENAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIVV

Query:  KNRSHFEVRDT
        KNRSHFEVR+T
Subjt:  KNRSHFEVRDT

KAG7026306.1 Flowering-promoting factor 1-like protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-4583.64Show/hide
Query:  MAGVWVFKNGVVRLVENAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIVV
        M+GVWVFKNGVVRLVE+AG D ++GGQRS  RRKVLV+  T EVMTSYA LEQKLM LGWERYYDDP+LLQFHKRSTVHLISLPK+FAKFKSMHMYDIVV
Subjt:  MAGVWVFKNGVVRLVENAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIVV

Query:  KNRSHFEVRD
        KNR+HFEV+D
Subjt:  KNRSHFEVRD

XP_022959407.1 flowering-promoting factor 1-like protein 3 [Cucurbita moschata]1.4e-56100Show/hide
Query:  MAGVWVFKNGVVRLVENAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIVV
        MAGVWVFKNGVVRLVENAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIVV
Subjt:  MAGVWVFKNGVVRLVENAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIVV

Query:  KNRSHFEVRDT
        KNRSHFEVRDT
Subjt:  KNRSHFEVRDT

XP_023006452.1 flowering-promoting factor 1-like protein 3 [Cucurbita maxima]3.9e-5699.1Show/hide
Query:  MAGVWVFKNGVVRLVENAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIVV
        MAGVWVFKNGVVRLVEN GADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIVV
Subjt:  MAGVWVFKNGVVRLVENAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIVV

Query:  KNRSHFEVRDT
        KNRSHFEVRDT
Subjt:  KNRSHFEVRDT

XP_038875612.1 flowering-promoting factor 1-like protein 1 [Benincasa hispida]3.3e-4784.82Show/hide
Query:  MAGVWVFKNGVVRLVENAGAD-TSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIV
        M+GVWVFKNGVVRLV+NAG D  +DGG RS+L+RK LVF  T EVMTSYA LEQKLMTLGWERYYDDPN+LQFHKRSTVHLISLPKDF KFKSMHMYDIV
Subjt:  MAGVWVFKNGVVRLVENAGAD-TSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIV

Query:  VKNRSHFEVRDT
        VKNR+HFEVRDT
Subjt:  VKNRSHFEVRDT

TrEMBL top hitse value%identityAlignment
A0A0A0KCC2 Uncharacterized protein1.3e-4481.25Show/hide
Query:  MAGVWVFKNGVVRLVENAGADTSD-GGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIV
        M+GVWVF+NGVVRLVEN G   ++ GGQ+S+LRRK LVF  T EVMTSYA LE+KL+ LGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIV
Subjt:  MAGVWVFKNGVVRLVENAGADTSD-GGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIV

Query:  VKNRSHFEVRDT
        VKNR+HFEV DT
Subjt:  VKNRSHFEVRDT

A0A1S3C8H5 flowering-promoting factor 1-like protein 13.4e-4581.08Show/hide
Query:  MAGVWVFKNGVVRLVENAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIVV
        M+GVWVF+NGVVRL+EN G   + GGQ+S+LRRK LVF  T EVMTSY  LE+KL+TLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIVV
Subjt:  MAGVWVFKNGVVRLVENAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIVV

Query:  KNRSHFEVRDT
        KNR+HFEV DT
Subjt:  KNRSHFEVRDT

A0A6J1ER18 flowering-promoting factor 1-like protein 11.5e-4582.73Show/hide
Query:  MAGVWVFKNGVVRLVENAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIVV
        M+GVWVFKNGVVRLVE+AG D  +GGQRS  RRKVLV+  T EVMTSYA LEQKLM LGWERYYDDP+LLQFHKRSTVHLISLPK+FAKF+SMHMYDIVV
Subjt:  MAGVWVFKNGVVRLVENAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIVV

Query:  KNRSHFEVRD
        KNR+HFEV+D
Subjt:  KNRSHFEVRD

A0A6J1H4F8 flowering-promoting factor 1-like protein 36.5e-57100Show/hide
Query:  MAGVWVFKNGVVRLVENAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIVV
        MAGVWVFKNGVVRLVENAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIVV
Subjt:  MAGVWVFKNGVVRLVENAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIVV

Query:  KNRSHFEVRDT
        KNRSHFEVRDT
Subjt:  KNRSHFEVRDT

A0A6J1KVW8 flowering-promoting factor 1-like protein 31.9e-5699.1Show/hide
Query:  MAGVWVFKNGVVRLVENAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIVV
        MAGVWVFKNGVVRLVEN GADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIVV
Subjt:  MAGVWVFKNGVVRLVENAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIVV

Query:  KNRSHFEVRDT
        KNRSHFEVRDT
Subjt:  KNRSHFEVRDT

SwissProt top hitse value%identityAlignment
O23624 Flowering-promoting factor 16.4e-3361.95Show/hide
Query:  MAGVWVFKNGVVRLVENAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYY--DDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDI
        M+GVWVFKNGV+RLVEN     SD    ++ RRKV+V+  TGEV++SY+TLEQ L +LGWERY+   D +LLQFHKRS++ LISLP+DF KF S++MYDI
Subjt:  MAGVWVFKNGVVRLVENAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYY--DDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDI

Query:  VVKNRSHFEVRDT
        VVKN ++F VRD+
Subjt:  VVKNRSHFEVRDT

O24340 Flowering-promoting factor 18.3e-3362.07Show/hide
Query:  MAGVWVFKNGVVRLVEN---AGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYY--DDPNLLQFHKRSTVHLISLPKDFAKFKSMHM
        M+GVWVFKNGV+RLVEN   +G DT+        RRKV+V+  TGEV++SY+TLEQ L +LGWERY+   D +LLQFHKRS++ LISLPKDF KF S++M
Subjt:  MAGVWVFKNGVVRLVEN---AGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYY--DDPNLLQFHKRSTVHLISLPKDFAKFKSMHM

Query:  YDIVVKNRSHFEVRDT
        YDIVVKN ++F VRD+
Subjt:  YDIVVKNRSHFEVRDT

Q0E1D7 Flowering-promoting factor 1-like protein 37.5e-3464.91Show/hide
Query:  MAGVWVFKNGVVRLVENAGADTS----DGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMY
        MAGVWVFK+G+VR VEN G++ S    DGG     RRKVLV   +GEV+ SY  LE++L  LGWERY  DP LLQFH+RSTVHLIS+P+DF+KFK +HMY
Subjt:  MAGVWVFKNGVVRLVENAGADTS----DGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMY

Query:  DIVVKNRSHFEVRD
        DIVVK R+ FEVRD
Subjt:  DIVVKNRSHFEVRD

Q8LR63 Flowering-promoting factor 1-like protein 22.9e-3056.35Show/hide
Query:  MAGVWVFKNGVVRLVEN--------AGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPN--------LLQFHKRSTVHLISLP
        M+GVWVF+NGVV+LVEN         G     GG    +RRK L+   TGEV+TSYA+LE+KL  LGWERYY            +LQFHKRS+V LISLP
Subjt:  MAGVWVFKNGVVRLVEN--------AGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPN--------LLQFHKRSTVHLISLP

Query:  KDFAKFKSMHMYDIVVKNRSHFEVRD
        KDF++F S+HMYDIVVKNR  F V D
Subjt:  KDFAKFKSMHMYDIVVKNRSHFEVRD

Q9LGE3 Flowering-promoting factor 1-like protein 11.3e-3061.61Show/hide
Query:  MAGVWVFKNGVVRLVE--NAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDI
        M+GVWVFKNGVVRLVE   A A T+  G     RRK LV   +G+V++SYA LE +L  LGWERYY+DP+L QFHKR ++ LISLP DF+ F S+HMYDI
Subjt:  MAGVWVFKNGVVRLVE--NAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDI

Query:  VVKNRSHFEVRD
        VVKNR  F V D
Subjt:  VVKNRSHFEVRD

Arabidopsis top hitse value%identityAlignment
AT4G31380.1 FPF1-like protein 14.7e-3156.1Show/hide
Query:  MAGVWVF-KNGVVRLVEN---------AGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPN---LLQFHKRSTVHLISLPKDF
        M+GVWVF KNGV+RLVEN         + + +S G Q+ R+RRK+LV   + EV++SY +LE+ L  LGWERYY   N   LLQFHKR+++ LISLP+DF
Subjt:  MAGVWVF-KNGVVRLVEN---------AGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPN---LLQFHKRSTVHLISLPKDF

Query:  AKFKSMHMYDIVVKNRSHFEVRD
        +KF S+HMYDIVVKN + F VRD
Subjt:  AKFKSMHMYDIVVKNRSHFEVRD

AT5G10625.1 BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1)1.4e-3057.66Show/hide
Query:  MAGVWVFKNGVVRLVENAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYD-DPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIV
        M+GVWVF NGV+RLVEN    +     +S  RR VLV+  TGE ++SY++LEQ L +LGWERY+  D +L+Q+HKRS++ LISLP+DF+KF S++MYDIV
Subjt:  MAGVWVFKNGVVRLVENAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYD-DPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIV

Query:  VKNRSHFEVRD
        VKN + F VRD
Subjt:  VKNRSHFEVRD

AT5G24860.1 flowering promoting factor 14.5e-3461.95Show/hide
Query:  MAGVWVFKNGVVRLVENAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYY--DDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDI
        M+GVWVFKNGV+RLVEN     SD    ++ RRKV+V+  TGEV++SY+TLEQ L +LGWERY+   D +LLQFHKRS++ LISLP+DF KF S++MYDI
Subjt:  MAGVWVFKNGVVRLVENAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYY--DDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDI

Query:  VVKNRSHFEVRDT
        VVKN ++F VRD+
Subjt:  VVKNRSHFEVRDT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGCGTTTGGGTGTTCAAAAACGGCGTCGTTCGACTGGTGGAGAATGCCGGAGCCGATACGTCGGACGGTGGCCAGCGGTCGAGACTTCGTCGGAAAGTGCTGGT
GTTCTGTTCGACGGGGGAAGTGATGACGTCATACGCAACGTTGGAACAAAAATTGATGACGTTGGGTTGGGAGCGTTATTACGATGATCCAAACCTACTGCAATTCCACA
AGAGATCGACGGTCCATCTCATTTCTCTTCCAAAGGACTTTGCCAAATTCAAATCGATGCACATGTACGACATCGTCGTTAAAAACCGATCCCATTTCGAAGTTAGAGAT
ACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGCGTTTGGGTGTTCAAAAACGGCGTCGTTCGACTGGTGGAGAATGCCGGAGCCGATACGTCGGACGGTGGCCAGCGGTCGAGACTTCGTCGGAAAGTGCTGGT
GTTCTGTTCGACGGGGGAAGTGATGACGTCATACGCAACGTTGGAACAAAAATTGATGACGTTGGGTTGGGAGCGTTATTACGATGATCCAAACCTACTGCAATTCCACA
AGAGATCGACGGTCCATCTCATTTCTCTTCCAAAGGACTTTGCCAAATTCAAATCGATGCACATGTACGACATCGTCGTTAAAAACCGATCCCATTTCGAAGTTAGAGAT
ACCTAA
Protein sequenceShow/hide protein sequence
MAGVWVFKNGVVRLVENAGADTSDGGQRSRLRRKVLVFCSTGEVMTSYATLEQKLMTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIVVKNRSHFEVRD
T