; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh17G003110 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G003110
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein RALF-like 33
Genome locationCmo_Chr17:1888832..1889215
RNA-Seq ExpressionCmoCh17G003110
SyntenyCmoCh17G003110
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575064.1 Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. sororia]1.1e-6299.21Show/hide
Query:  MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
        MGISRVSALIAAFAVLAAHFLILSA AIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
Subjt:  MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG

Query:  ASYYNCRPGAQANPYTRGCSAITRCRS
        ASYYNCRPGAQANPYTRGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYTRGCSAITRCRS

KAG7013637.1 Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-6097.64Show/hide
Query:  MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
        MGISRVSALIAAFAVLAAHFLILSA A  FSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
Subjt:  MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG

Query:  ASYYNCRPGAQANPYTRGCSAITRCRS
        ASYYNCRPGAQANPYTRGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYTRGCSAITRCRS

XP_022959207.1 protein RALF-like 33 [Cucurbita moschata]3.8e-63100Show/hide
Query:  MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
        MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
Subjt:  MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG

Query:  ASYYNCRPGAQANPYTRGCSAITRCRS
        ASYYNCRPGAQANPYTRGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYTRGCSAITRCRS

XP_023006467.1 protein RALF-like 33 [Cucurbita maxima]1.8e-6096.85Show/hide
Query:  MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
        MGISRVSALIAAFAVLAAHFLI SA AIDFSGDNEILFAPTKSECRGSI ECFLAGN DDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
Subjt:  MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG

Query:  ASYYNCRPGAQANPYTRGCSAITRCRS
        ASYYNCRPGAQANPYTRGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYTRGCSAITRCRS

XP_023547686.1 protein RALF-like 33 [Cucurbita pepo subsp. pepo]6.1e-6196.85Show/hide
Query:  MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
        MGISRVSALIAAF VLAAHFLI SA AIDFSGDNEILFAPTKSECRGSIAECFLAGN+DDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
Subjt:  MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG

Query:  ASYYNCRPGAQANPYTRGCSAITRCRS
        ASYYNCRPGAQANPYTRGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYTRGCSAITRCRS

TrEMBL top hitse value%identityAlignment
A0A6J1C9N4 protein RALF-like 333.4e-4980.31Show/hide
Query:  MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
        M ISRVS+L+AAFA+ AAH L+ SA A DFSGD+++L+ P KSECRGSIAEC LAG  DDSGFG EFEMDSEINRRILAT RYISYGAL+RN+VPCSRRG
Subjt:  MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG

Query:  ASYYNCRPGAQANPYTRGCSAITRCRS
        ASYYNC+PGAQANPY RGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYTRGCSAITRCRS

A0A6J1EV64 protein RALF-like 332.2e-4875.59Show/hide
Query:  MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
        M ISRV + +AA A++AAHFL+ SA A+DFSG +++LF P +S+CRGSIAECFLAG+D+DS FGMEFEMDSEINRRILA++RY+SYGAL+RN+VPCSRRG
Subjt:  MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG

Query:  ASYYNCRPGAQANPYTRGCSAITRCRS
        ASYYNC+PGAQANPY RGC+AITRCRS
Subjt:  ASYYNCRPGAQANPYTRGCSAITRCRS

A0A6J1H3W7 protein RALF-like 331.8e-63100Show/hide
Query:  MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
        MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
Subjt:  MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG

Query:  ASYYNCRPGAQANPYTRGCSAITRCRS
        ASYYNCRPGAQANPYTRGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYTRGCSAITRCRS

A0A6J1KG89 protein RALF-like 331.3e-4875.59Show/hide
Query:  MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
        M ISRV + +AA A++AAHFL+ SA  +DFSGD+++LF P +S+CRGSIAECFLAG+D+DS FGMEFEMDSEINRRILA +RY+SYGAL+RN+VPCSRRG
Subjt:  MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG

Query:  ASYYNCRPGAQANPYTRGCSAITRCRS
        ASYYNC+PGAQANPY RGC+AITRCRS
Subjt:  ASYYNCRPGAQANPYTRGCSAITRCRS

A0A6J1KVY0 protein RALF-like 338.6e-6196.85Show/hide
Query:  MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
        MGISRVSALIAAFAVLAAHFLI SA AIDFSGDNEILFAPTKSECRGSI ECFLAGN DDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG
Subjt:  MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRG

Query:  ASYYNCRPGAQANPYTRGCSAITRCRS
        ASYYNCRPGAQANPYTRGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYTRGCSAITRCRS

SwissProt top hitse value%identityAlignment
Q8L9P8 Protein RALF-like 331.9e-3367.26Show/hide
Query:  AVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQAN
        A+L  HFL  +A     SGD    F P +S+C G+IAEC L+  ++      EFEMDSEINRRILATT+YISYGALRRN VPCSRRGASYYNCR GAQAN
Subjt:  AVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQAN

Query:  PYTRGCSAITRCR
        PY+RGCSAITRCR
Subjt:  PYTRGCSAITRCR

Q945T0 Rapid alkalinization factor2.9e-2960.18Show/hide
Query:  VLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANP
        VL   F I  AAA D    + ++ A +   C+GSI EC             EFE+DSE NRRILAT +YISYGAL++N+VPCSRRGASYYNC+PGAQANP
Subjt:  VLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANP

Query:  YTRGCSAITRCRS
        Y+RGCSAITRCRS
Subjt:  YTRGCSAITRCRS

Q9LUS7 Rapid alkalinization factor 232.9e-3460.14Show/hide
Query:  GISRVSALIAAFA---VLAAH--FLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSG--------FGMEFEMDSEINRRILATTRYISYGA
        G+SR S   A FA   +LA H   + +S+ + +F+GD    F P ++ECRG+IAEC ++    D G         G EFEMDSEINRRILAT RYISYGA
Subjt:  GISRVSALIAAFA---VLAAH--FLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSG--------FGMEFEMDSEINRRILATTRYISYGA

Query:  LRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR
        LRRN +PCSRRGASYYNCR GAQANPY+RGCSAITRCR
Subjt:  LRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR

Q9MA62 Protein RALF-like 227.3e-2553.72Show/hide
Query:  AAFAVLAAHFLILSA--AAIDFSGDNEILFAPTK---SECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYN
        A +AV+A   +++SA  +  DF    + + A +    S C GSIAEC             E E DS+I+RRILA  +YISYGA+RRN+VPCSRRGASYYN
Subjt:  AAFAVLAAHFLILSA--AAIDFSGDNEILFAPTK---SECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYN

Query:  CRPGAQANPYTRGCSAITRCR
        C+ GAQANPY+RGCS ITRCR
Subjt:  CRPGAQANPYTRGCSAITRCR

Q9SRY3 Protein RALF-like 18.6e-2670.59Show/hide
Query:  SECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCRS
        S C GSIAEC  A          E EMDSEINRRILATT+YISY +L+RN+VPCSRRGASYYNC+ GAQANPY+RGCS I RCRS
Subjt:  SECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCRS

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 16.1e-2770.59Show/hide
Query:  SECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCRS
        S C GSIAEC  A          E EMDSEINRRILATT+YISY +L+RN+VPCSRRGASYYNC+ GAQANPY+RGCS I RCRS
Subjt:  SECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCRS

AT2G33775.1 ralf-like 194.0e-1867.74Show/hide
Query:  MEFEMDSEINRRILATTR-YISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRC
        +++ MDSE NRR LA  R YISYGALR+NNVPCSRRG SYY+C+   +ANPY RGCS IT C
Subjt:  MEFEMDSEINRRILATTR-YISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRC

AT3G05490.1 ralf-like 225.2e-2653.72Show/hide
Query:  AAFAVLAAHFLILSA--AAIDFSGDNEILFAPTK---SECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYN
        A +AV+A   +++SA  +  DF    + + A +    S C GSIAEC             E E DS+I+RRILA  +YISYGA+RRN+VPCSRRGASYYN
Subjt:  AAFAVLAAHFLILSA--AAIDFSGDNEILFAPTK---SECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYN

Query:  CRPGAQANPYTRGCSAITRCR
        C+ GAQANPY+RGCS ITRCR
Subjt:  CRPGAQANPYTRGCSAITRCR

AT3G16570.1 rapid alkalinization factor 232.1e-3560.14Show/hide
Query:  GISRVSALIAAFA---VLAAH--FLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSG--------FGMEFEMDSEINRRILATTRYISYGA
        G+SR S   A FA   +LA H   + +S+ + +F+GD    F P ++ECRG+IAEC ++    D G         G EFEMDSEINRRILAT RYISYGA
Subjt:  GISRVSALIAAFA---VLAAH--FLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSG--------FGMEFEMDSEINRRILATTRYISYGA

Query:  LRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR
        LRRN +PCSRRGASYYNCR GAQANPY+RGCSAITRCR
Subjt:  LRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR

AT4G15800.1 ralf-like 331.4e-3467.26Show/hide
Query:  AVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQAN
        A+L  HFL  +A     SGD    F P +S+C G+IAEC L+  ++      EFEMDSEINRRILATT+YISYGALRRN VPCSRRGASYYNCR GAQAN
Subjt:  AVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQAN

Query:  PYTRGCSAITRCR
        PY+RGCSAITRCR
Subjt:  PYTRGCSAITRCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATCTCACGCGTTTCTGCTCTCATTGCTGCGTTCGCCGTTCTCGCCGCTCATTTTCTGATCTTATCGGCAGCGGCCATCGATTTCTCCGGCGACAACGAGATTCT
CTTTGCTCCGACTAAATCCGAGTGCCGAGGCTCAATCGCCGAGTGCTTTCTCGCTGGAAACGATGACGATTCCGGCTTCGGAATGGAGTTCGAGATGGACTCTGAAATCA
ATCGCCGAATTCTAGCGACTACTCGCTACATCAGCTATGGTGCTCTGAGGAGGAACAACGTTCCTTGCTCCCGCCGCGGCGCTTCTTACTACAACTGCCGTCCAGGCGCT
CAGGCGAATCCTTACACCCGTGGTTGTAGCGCCATTACTCGCTGCCGAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTATCTCACGCGTTTCTGCTCTCATTGCTGCGTTCGCCGTTCTCGCCGCTCATTTTCTGATCTTATCGGCAGCGGCCATCGATTTCTCCGGCGACAACGAGATTCT
CTTTGCTCCGACTAAATCCGAGTGCCGAGGCTCAATCGCCGAGTGCTTTCTCGCTGGAAACGATGACGATTCCGGCTTCGGAATGGAGTTCGAGATGGACTCTGAAATCA
ATCGCCGAATTCTAGCGACTACTCGCTACATCAGCTATGGTGCTCTGAGGAGGAACAACGTTCCTTGCTCCCGCCGCGGCGCTTCTTACTACAACTGCCGTCCAGGCGCT
CAGGCGAATCCTTACACCCGTGGTTGTAGCGCCATTACTCGCTGCCGAAGTTAA
Protein sequenceShow/hide protein sequence
MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGA
QANPYTRGCSAITRCRS