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CmoCh17G003260 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G003260
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr17:1970331..1973715
RNA-Seq ExpressionCmoCh17G003260
SyntenyCmoCh17G003260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575077.1 hypothetical protein SDJN03_25716, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3597.22Show/hide
Query:  MPSDNHSLLKTIWCGGRLSYDVKFSHRSLMNNGGLCRDEQWNSDLLLPMELMNMLIEIEKVGEQSCCWCCNI
        MPSDNHSLLKTIWCGGRLSYDVKFSHR+LMNNGGLCRDEQWNSD LLPMELMNMLIEIEKVGEQSCCWCCNI
Subjt:  MPSDNHSLLKTIWCGGRLSYDVKFSHRSLMNNGGLCRDEQWNSDLLLPMELMNMLIEIEKVGEQSCCWCCNI
KAG7013651.1 hypothetical protein SDJN02_23818, partial [Cucurbita argyrosperma subsp. argyrosperma]8.8e-2392.73Show/hide
Query:  MPSDNHSLLKTIWCGGRLSYDVKFSHRSLMNNGGLCRDEQWNSDLLLPMELMNML
        MPSDNHSLLKTIWCGGRLSYDVKFSHR+LMNNGGLCRDEQWNSD LLPMELMN++
Subjt:  MPSDNHSLLKTIWCGGRLSYDVKFSHRSLMNNGGLCRDEQWNSDLLLPMELMNML
KAG7026320.1 hypothetical protein SDJN02_12821, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-2354.78Show/hide
Query:  CPISGGCFPASRRQGANSSTIGVDKRTALYNFLTEVGNFTFLTMQFRVRQAVRKLDSTFNDLFPFEFDRRFFEKFRTFLTYGCVACMCKDVIGVFAYQVF
        CPISGGCF ASR+  AN S IGV+K+T     + +   F  L    R+     +  +   D      DRRFFEKFRTFL YGCV CMC+D+IG FAYQVF
Subjt:  CPISGGCFPASRRQGANSSTIGVDKRTALYNFLTEVGNFTFLTMQFRVRQAVRKLDSTFNDLFPFEFDRRFFEKFRTFLTYGCVACMCKDVIGVFAYQVF

Query:  GFDRLQFPICIEDHY
        GFDRL FPICIE +Y
Subjt:  GFDRLQFPICIEDHY
KGN47428.1 hypothetical protein Csa_021710 [Cucumis sativus]1.5e-0656.14Show/hide
Query:  GTLRLVLLYYPHQ---------YCRFMSAMENTLTNFMTYILLQCPISGGCFPASRR
        GT+ L++L Y +           CR MSAME T TNF+T+I LQCPISGGCFPASR+
Subjt:  GTLRLVLLYYPHQ---------YCRFMSAMENTLTNFMTYILLQCPISGGCFPASRR
TrEMBL top hitse value%identityAlignment
A0A0A0KD32 Uncharacterized protein7.3e-0756.14Show/hide
Query:  GTLRLVLLYYPHQ---------YCRFMSAMENTLTNFMTYILLQCPISGGCFPASRR
        GT+ L++L Y +           CR MSAME T TNF+T+I LQCPISGGCFPASR+
Subjt:  GTLRLVLLYYPHQ---------YCRFMSAMENTLTNFMTYILLQCPISGGCFPASRR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGAGCGATAATCATAGCTTGTTGAAAACGATTTGGTGTGGTGGACGTCTGTCATATGATGTGAAATTTTCTCACCGATCTTTGATGAACAATGGCGGATTATGTCG
GGACGAACAATGGAATTCAGATTTGCTGTTGCCAATGGAGTTGATGAATATGTTAATCGAAATCGAGAAAGTTGGGGAACAATCGTGTTGCTGGTGCTGCAATATCGGTA
CTCTACGACTAGTCCTGCTTTATTATCCTCATCAGTACTGCCGGTTCATGTCCGCCATGGAAAATACACTAACGAACTTCATGACCTATATCCTCTTGCAGTGTCCCATA
TCTGGTGGATGTTTCCCGGCATCTCGTCGTCAAGGAGCCAATTCTTCGACAATCGGAGTTGATAAGCGAACAGCATTATATAATTTTCTTACTGAGGTCGGAAATTTCAC
TTTTCTCACGATGCAATTCAGAGTCAGGCAGGCAGTAAGGAAGCTGGATTCAACTTTTAATGACCTCTTCCCGTTTGAGTTTGACAGGCGGTTCTTTGAGAAATTCAGGA
CCTTCCTCACGTATGGCTGTGTGGCTTGCATGTGCAAAGACGTTATCGGTGTTTTTGCCTACCAAGTCTTCGGCTTTGATCGACTCCAGTTCCCAATCTGTATTGAAGAC
CACTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCGAGCGATAATCATAGCTTGTTGAAAACGATTTGGTGTGGTGGACGTCTGTCATATGATGTGAAATTTTCTCACCGATCTTTGATGAACAATGGCGGATTATGTCG
GGACGAACAATGGAATTCAGATTTGCTGTTGCCAATGGAGTTGATGAATATGTTAATCGAAATCGAGAAAGTTGGGGAACAATCGTGTTGCTGGTGCTGCAATATCGGTA
CTCTACGACTAGTCCTGCTTTATTATCCTCATCAGTACTGCCGGTTCATGTCCGCCATGGAAAATACACTAACGAACTTCATGACCTATATCCTCTTGCAGTGTCCCATA
TCTGGTGGATGTTTCCCGGCATCTCGTCGTCAAGGAGCCAATTCTTCGACAATCGGAGTTGATAAGCGAACAGCATTATATAATTTTCTTACTGAGGTCGGAAATTTCAC
TTTTCTCACGATGCAATTCAGAGTCAGGCAGGCAGTAAGGAAGCTGGATTCAACTTTTAATGACCTCTTCCCGTTTGAGTTTGACAGGCGGTTCTTTGAGAAATTCAGGA
CCTTCCTCACGTATGGCTGTGTGGCTTGCATGTGCAAAGACGTTATCGGTGTTTTTGCCTACCAAGTCTTCGGCTTTGATCGACTCCAGTTCCCAATCTGTATTGAAGAC
CACTATTAA
Protein sequenceShow/hide protein sequence
MPSDNHSLLKTIWCGGRLSYDVKFSHRSLMNNGGLCRDEQWNSDLLLPMELMNMLIEIEKVGEQSCCWCCNIGTLRLVLLYYPHQYCRFMSAMENTLTNFMTYILLQCPI
SGGCFPASRRQGANSSTIGVDKRTALYNFLTEVGNFTFLTMQFRVRQAVRKLDSTFNDLFPFEFDRRFFEKFRTFLTYGCVACMCKDVIGVFAYQVFGFDRLQFPICIED
HY