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CmoCh17G003290 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G003290
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr17:1992564..1992806
RNA-Seq ExpressionCmoCh17G003290
SyntenyCmoCh17G003290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575081.1 hypothetical protein SDJN03_25720, partial [Cucurbita argyrosperma subsp. sororia]2.0e-3392.86Show/hide
Query:  MARRGDLAKIGREGFDLIDEYFGRAPATRR----AAVRPALPQAPCKPEQPPRKKREKMPVAVNCNQVAKARGGIVITTWRAAK
        MARRGDLAKIGREGFDLIDEYFGRAPATRR    AA RPALPQAPCK EQPPRKKREKMPVAVNCNQVAKARGGIVITTWRAAK
Subjt:  MARRGDLAKIGREGFDLIDEYFGRAPATRR----AAVRPALPQAPCKPEQPPRKKREKMPVAVNCNQVAKARGGIVITTWRAAK

KAG6575082.1 hypothetical protein SDJN03_25721, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2883.95Show/hide
Query:  MARRGDLAKIGREGFDLIDEYFGRAPATRRAAV-RPALPQAPCKPEQPPRKKREKMPVAVNCNQVAKARGGIVITTWRAAK
        MA R DLAKIGREGF+LIDEYFGR PATRR AV RPALPQAPCK EQPPRK REK+PV VNCNQVA+ARGG+VITTWRA K
Subjt:  MARRGDLAKIGREGFDLIDEYFGRAPATRRAAV-RPALPQAPCKPEQPPRKKREKMPVAVNCNQVAKARGGIVITTWRAAK

KGN47421.1 hypothetical protein Csa_021737 [Cucumis sativus]1.3e-0853.75Show/hide
Query:  DLAKIGREGFDLIDEYFGRAPAT--RRAA----VRPALPQAPCK-PEQPPRKKREKMPVAVNCNQVAKARGGIVITTWRA
        +LA+IG EGF LID++FGRA  T  RR      +RPA  Q P K  EQPP K +EK    V  + +AK RGGIVITTWR+
Subjt:  DLAKIGREGFDLIDEYFGRAPAT--RRAA----VRPALPQAPCK-PEQPPRKKREKMPVAVNCNQVAKARGGIVITTWRA

KGN47422.1 hypothetical protein Csa_021740 [Cucumis sativus]8.3e-1667.09Show/hide
Query:  RGDLAKIGREGFDLIDEYFGRAPAT--RRAA---VRPALPQAPCKPEQPPRKKREKMPVAVNCNQVAKARGGIVITTWR
        RGDLAKIGREGF +IDEYFGRA +T  RR A    RPALPQ P K EQPPR ++EK   AV  +QVAK  GG VITTWR
Subjt:  RGDLAKIGREGFDLIDEYFGRAPAT--RRAA---VRPALPQAPCKPEQPPRKKREKMPVAVNCNQVAKARGGIVITTWR

XP_023548315.1 multiple organellar RNA editing factor 3, mitochondrial [Cucurbita pepo subsp. pepo]9.5e-2080.6Show/hide
Query:  MARRGDLAKIGREGFDLIDEYFGRAPATRRAAV----RPALPQAPCKPEQPPRKKREKMPVAVNCNQ
        MA R DLAKIGREGF+LIDEYFGR PATRRAA     RPALPQAPCK EQPPRK REK+PV VNCNQ
Subjt:  MARRGDLAKIGREGFDLIDEYFGRAPATRRAAV----RPALPQAPCKPEQPPRKKREKMPVAVNCNQ

TrEMBL top hitse value%identityAlignment
A0A0A0KG95 Uncharacterized protein4.0e-1667.09Show/hide
Query:  RGDLAKIGREGFDLIDEYFGRAPAT--RRAA---VRPALPQAPCKPEQPPRKKREKMPVAVNCNQVAKARGGIVITTWR
        RGDLAKIGREGF +IDEYFGRA +T  RR A    RPALPQ P K EQPPR ++EK   AV  +QVAK  GG VITTWR
Subjt:  RGDLAKIGREGFDLIDEYFGRAPAT--RRAA---VRPALPQAPCKPEQPPRKKREKMPVAVNCNQVAKARGGIVITTWR

A0A0A0KI19 Uncharacterized protein6.2e-0953.75Show/hide
Query:  DLAKIGREGFDLIDEYFGRAPAT--RRAA----VRPALPQAPCK-PEQPPRKKREKMPVAVNCNQVAKARGGIVITTWRA
        +LA+IG EGF LID++FGRA  T  RR      +RPA  Q P K  EQPP K +EK    V  + +AK RGGIVITTWR+
Subjt:  DLAKIGREGFDLIDEYFGRAPAT--RRAA----VRPALPQAPCK-PEQPPRKKREKMPVAVNCNQVAKARGGIVITTWRA

A0A0A0L5A8 Uncharacterized protein1.9e-0546.67Show/hide
Query:  ARRGDLAKIGREGFDLIDEYFGRAPATRRAAVRPALPQAPCKPEQPPRKKREKMPVAVNCNQVAKARGGIVITTW
        AR  DLA+IG EGF  I+E + R P  +   V PA PQ P     PP++K E  P ++ C+Q+AKA GGI+I  W
Subjt:  ARRGDLAKIGREGFDLIDEYFGRAPATRRAAVRPALPQAPCKPEQPPRKKREKMPVAVNCNQVAKARGGIVITTW

A0A5A7U5Q5 Uncharacterized protein5.5e-0547.95Show/hide
Query:  RGDLAKIGREGFDLIDEYFGRAPATRRAAVRPALPQAPCKPEQPPRKKREKMPVAVNCNQVAKARGGIVITTW
        R DLA+IG E F LI+E++ R P  R   V PA PQ P    QPP++  E  P  + C+Q+AKA GGI+I  W
Subjt:  RGDLAKIGREGFDLIDEYFGRAPATRRAAVRPALPQAPCKPEQPPRKKREKMPVAVNCNQVAKARGGIVITTW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGTCGTGGTGACCTGGCAAAGATTGGAAGAGAAGGATTTGACCTAATTGACGAATACTTCGGTCGAGCACCGGCGACGAGAAGGGCGGCGGTGAGGCCGGCTCT
GCCGCAAGCGCCGTGTAAGCCGGAGCAACCTCCGAGGAAGAAGAGAGAAAAGATGCCTGTAGCGGTGAACTGCAATCAGGTAGCCAAAGCCCGCGGCGGAATTGTGATAA
CCACTTGGCGTGCGGCAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCGTCGTGGTGACCTGGCAAAGATTGGAAGAGAAGGATTTGACCTAATTGACGAATACTTCGGTCGAGCACCGGCGACGAGAAGGGCGGCGGTGAGGCCGGCTCT
GCCGCAAGCGCCGTGTAAGCCGGAGCAACCTCCGAGGAAGAAGAGAGAAAAGATGCCTGTAGCGGTGAACTGCAATCAGGTAGCCAAAGCCCGCGGCGGAATTGTGATAA
CCACTTGGCGTGCGGCAAAATGA
Protein sequenceShow/hide protein sequence
MARRGDLAKIGREGFDLIDEYFGRAPATRRAAVRPALPQAPCKPEQPPRKKREKMPVAVNCNQVAKARGGIVITTWRAAK