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CmoCh17G003300 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G003300
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr17:1995128..1995379
RNA-Seq ExpressionCmoCh17G003300
SyntenyCmoCh17G003300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575081.1 hypothetical protein SDJN03_25720, partial [Cucurbita argyrosperma subsp. sororia]5.6e-3185.71Show/hide
Query:  MAPRADLAKIGREGFELIDEYFGRVPATRRAAA-AVARPALPQAPCKAEQPPRKMREKLPVPVNCNQVARARGGVVITTWRAPK
        MA R DLAKIGREGF+LIDEYFGR PATRRAAA A ARPALPQAPCKAEQPPRK REK+PV VNCNQVA+ARGG+VITTWRA K
Subjt:  MAPRADLAKIGREGFELIDEYFGRVPATRRAAA-AVARPALPQAPCKAEQPPRKMREKLPVPVNCNQVARARGGVVITTWRAPK

KAG6575082.1 hypothetical protein SDJN03_25721, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3596.39Show/hide
Query:  MAPRADLAKIGREGFELIDEYFGRVPATRRAAAAVARPALPQAPCKAEQPPRKMREKLPVPVNCNQVARARGGVVITTWRAPK
        MAPRADLAKIGREGFELIDEYFGRVPATRR   AVARPALPQAPCKAEQPPRKMREKLPVPVNCNQVARARGGVVITTWRAPK
Subjt:  MAPRADLAKIGREGFELIDEYFGRVPATRRAAAAVARPALPQAPCKAEQPPRKMREKLPVPVNCNQVARARGGVVITTWRAPK

KGN47421.1 hypothetical protein Csa_021737 [Cucumis sativus]9.3e-1053.09Show/hide
Query:  ADLAKIGREGFELIDEYFGRVPAT---RRAAAAVARPALPQAPCK-AEQPPRKMREKLPVPVNCNQVARARGGVVITTWRA
        A+LA+IG EGF+LID++FGR   T   R  AA   RPA  Q P K AEQPP K +EK    V  + +A+ RGG+VITTWR+
Subjt:  ADLAKIGREGFELIDEYFGRVPAT---RRAAAAVARPALPQAPCK-AEQPPRKMREKLPVPVNCNQVARARGGVVITTWRA

KGN47422.1 hypothetical protein Csa_021740 [Cucumis sativus]1.0e-1665.82Show/hide
Query:  RADLAKIGREGFELIDEYFGRVPAT--RRAAAAVARPALPQAPCKAEQPPRKMREKLPVPVNCNQVARARGGVVITTWR
        R DLAKIGREGF++IDEYFGR  +T  RR AA  ARPALPQ P KAEQPPR  +EK    V  +QVA+  GG VITTWR
Subjt:  RADLAKIGREGFELIDEYFGRVPAT--RRAAAAVARPALPQAPCKAEQPPRKMREKLPVPVNCNQVARARGGVVITTWR

XP_023548315.1 multiple organellar RNA editing factor 3, mitochondrial [Cucurbita pepo subsp. pepo]3.2e-2697.01Show/hide
Query:  MAPRADLAKIGREGFELIDEYFGRVPATRRAAAAVA-RPALPQAPCKAEQPPRKMREKLPVPVNCNQ
        MAPRADLAKIGREGFELIDEYFGRVPATRRAAAA A RPALPQAPCKAEQPPRKMREKLPVPVNCNQ
Subjt:  MAPRADLAKIGREGFELIDEYFGRVPATRRAAAAVA-RPALPQAPCKAEQPPRKMREKLPVPVNCNQ

TrEMBL top hitse value%identityAlignment
A0A0A0KG95 Uncharacterized protein5.0e-1765.82Show/hide
Query:  RADLAKIGREGFELIDEYFGRVPAT--RRAAAAVARPALPQAPCKAEQPPRKMREKLPVPVNCNQVARARGGVVITTWR
        R DLAKIGREGF++IDEYFGR  +T  RR AA  ARPALPQ P KAEQPPR  +EK    V  +QVA+  GG VITTWR
Subjt:  RADLAKIGREGFELIDEYFGRVPAT--RRAAAAVARPALPQAPCKAEQPPRKMREKLPVPVNCNQVARARGGVVITTWR

A0A0A0KI19 Uncharacterized protein4.5e-1053.09Show/hide
Query:  ADLAKIGREGFELIDEYFGRVPAT---RRAAAAVARPALPQAPCK-AEQPPRKMREKLPVPVNCNQVARARGGVVITTWRA
        A+LA+IG EGF+LID++FGR   T   R  AA   RPA  Q P K AEQPP K +EK    V  + +A+ RGG+VITTWR+
Subjt:  ADLAKIGREGFELIDEYFGRVPAT---RRAAAAVARPALPQAPCK-AEQPPRKMREKLPVPVNCNQVARARGGVVITTWRA

A0A5A7U5Q5 Uncharacterized protein2.0e-0547.37Show/hide
Query:  RADLAKIGREGFELIDEYFGRVPATRRAAAAVARPALPQAPCKAEQPPRKMREKLPVPVNCNQVARARGGVVITTW
        R DLA+IG E F LI+E++ R    RR    V  PA PQ P  A QPP++M E  P P+ C+Q+A+A GG++I  W
Subjt:  RADLAKIGREGFELIDEYFGRVPATRRAAAAVARPALPQAPCKAEQPPRKMREKLPVPVNCNQVARARGGVVITTW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCTCGTGCTGACCTGGCAAAGATTGGAAGAGAAGGATTCGAACTAATTGACGAATACTTCGGTCGAGTACCGGCGACGAGAAGAGCGGCGGCGGCGGTGGCGAG
GCCGGCTCTGCCGCAGGCGCCGTGTAAGGCGGAGCAACCTCCGAGGAAGATGAGAGAAAAGCTGCCTGTACCGGTGAACTGCAATCAGGTCGCCAGAGCCCGCGGCGGAG
TTGTGATAACGACTTGGCGTGCGCCAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCTCGTGCTGACCTGGCAAAGATTGGAAGAGAAGGATTCGAACTAATTGACGAATACTTCGGTCGAGTACCGGCGACGAGAAGAGCGGCGGCGGCGGTGGCGAG
GCCGGCTCTGCCGCAGGCGCCGTGTAAGGCGGAGCAACCTCCGAGGAAGATGAGAGAAAAGCTGCCTGTACCGGTGAACTGCAATCAGGTCGCCAGAGCCCGCGGCGGAG
TTGTGATAACGACTTGGCGTGCGCCAAAATGA
Protein sequenceShow/hide protein sequence
MAPRADLAKIGREGFELIDEYFGRVPATRRAAAAVARPALPQAPCKAEQPPRKMREKLPVPVNCNQVARARGGVVITTWRAPK