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CmoCh17G003430 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G003430
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionzinc finger protein 6-like
Genome locationCmo_Chr17:2077666..2078025
RNA-Seq ExpressionCmoCh17G003430
SyntenyCmoCh17G003430
Gene Ontology termsGO:0009736 - cytokinin-activated signaling pathway (biological process)
GO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0010090 - trichome morphogenesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044299 - Zinc finger protein GIS3/ZFP5/ZFP6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013666.1 Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-6098.32Show/hide
Query:  MKLFGYSVNASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAAGRSPPPNYEMPVEAPPSVGGGEINGE
        MKLFGYSV ASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSA GRSPPPNYEMPVEAPPSVGGGEINGE
Subjt:  MKLFGYSVNASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAAGRSPPPNYEMPVEAPPSVGGGEINGE

Query:  NNGVDLHLSLAPSSTRIFS
        NNGVDLHLSLAPSSTRIFS
Subjt:  NNGVDLHLSLAPSSTRIFS

KGN47401.1 hypothetical protein Csa_022997 [Cucumis sativus]5.2e-3867.65Show/hide
Query:  MKLFGYSVNAS-----AEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLP-------RNFFTPTPPPS-----AAGRSPPPNYE
        MKLFG+SV AS        +LGAPC NH KRF+CQFCGREFANSQALGGHQNAHKRERQLAKQLLP       RNF   TPP S     +AGR+PPP Y 
Subjt:  MKLFGYSVNAS-----AEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLP-------RNFFTPTPPPS-----AAGRSPPPNYE

Query:  MPVEAPPS-VGGGEINGENNGVDLHLSLAPSSTRIF
        + V+A P+ VGGGE+N E+NGVDLHLSLAPSS RIF
Subjt:  MPVEAPPS-VGGGEINGENNGVDLHLSLAPSSTRIF

XP_022959394.1 zinc finger protein 6-like [Cucurbita moschata]8.8e-62100Show/hide
Query:  MKLFGYSVNASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAAGRSPPPNYEMPVEAPPSVGGGEINGE
        MKLFGYSVNASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAAGRSPPPNYEMPVEAPPSVGGGEINGE
Subjt:  MKLFGYSVNASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAAGRSPPPNYEMPVEAPPSVGGGEINGE

Query:  NNGVDLHLSLAPSSTRIFS
        NNGVDLHLSLAPSSTRIFS
Subjt:  NNGVDLHLSLAPSSTRIFS

XP_023006285.1 zinc finger protein 6-like [Cucurbita maxima]2.4e-5996.64Show/hide
Query:  MKLFGYSVNASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAAGRSPPPNYEMPVEAPPSVGGGEINGE
        MKLFGYSV ASAEPSLGAPC NHIKRF+CQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAAG SPPPNYEMPVEAPPSVGGGEINGE
Subjt:  MKLFGYSVNASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAAGRSPPPNYEMPVEAPPSVGGGEINGE

Query:  NNGVDLHLSLAPSSTRIFS
        NNGVDLHLSLAPSSTRIFS
Subjt:  NNGVDLHLSLAPSSTRIFS

XP_023548316.1 zinc finger protein 6-like [Cucurbita pepo subsp. pepo]4.4e-6199.16Show/hide
Query:  MKLFGYSVNASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAAGRSPPPNYEMPVEAPPSVGGGEINGE
        MKLFGYSV ASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAAGRSPPPNYEMPVEAPPSVGGGEINGE
Subjt:  MKLFGYSVNASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAAGRSPPPNYEMPVEAPPSVGGGEINGE

Query:  NNGVDLHLSLAPSSTRIFS
        NNGVDLHLSLAPSSTRIFS
Subjt:  NNGVDLHLSLAPSSTRIFS

TrEMBL top hitse value%identityAlignment
A0A0A0KI02 C2H2-type domain-containing protein2.5e-3867.65Show/hide
Query:  MKLFGYSVNAS-----AEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLP-------RNFFTPTPPPS-----AAGRSPPPNYE
        MKLFG+SV AS        +LGAPC NH KRF+CQFCGREFANSQALGGHQNAHKRERQLAKQLLP       RNF   TPP S     +AGR+PPP Y 
Subjt:  MKLFGYSVNAS-----AEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLP-------RNFFTPTPPPS-----AAGRSPPPNYE

Query:  MPVEAPPS-VGGGEINGENNGVDLHLSLAPSSTRIF
        + V+A P+ VGGGE+N E+NGVDLHLSLAPSS RIF
Subjt:  MPVEAPPS-VGGGEINGENNGVDLHLSLAPSSTRIF

A0A1S3C7Q6 zinc finger protein 6-like1.1e-3666.42Show/hide
Query:  MKLFGYSVNASAEPS-----LGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLP-------RNFFTPTPPPS----AAGRSPPPNYEM
        MKLFG+SV AS   +     LGAPC NH KRF+CQFCGREFANSQALGGHQNAHKRERQLAKQLLP       RNFFT TPP +    +AGR+PPP   +
Subjt:  MKLFGYSVNASAEPS-----LGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLP-------RNFFTPTPPPS----AAGRSPPPNYEM

Query:  PVEAPPS-VGGGEINGENNGVDLHLSLAPSSTRI
         V+A P+ VGGG+++ E+NGVDLHLSLAPSS RI
Subjt:  PVEAPPS-VGGGEINGENNGVDLHLSLAPSSTRI

A0A5D3BTX6 Zinc finger protein 6-like1.1e-3666.42Show/hide
Query:  MKLFGYSVNASAEPS-----LGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLP-------RNFFTPTPPPS----AAGRSPPPNYEM
        MKLFG+SV AS   +     LGAPC NH KRF+CQFCGREFANSQALGGHQNAHKRERQLAKQLLP       RNFFT TPP +    +AGR+PPP   +
Subjt:  MKLFGYSVNASAEPS-----LGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLP-------RNFFTPTPPPS----AAGRSPPPNYEM

Query:  PVEAPPS-VGGGEINGENNGVDLHLSLAPSSTRI
         V+A P+ VGGG+++ E+NGVDLHLSLAPSS RI
Subjt:  PVEAPPS-VGGGEINGENNGVDLHLSLAPSSTRI

A0A6J1H7Y0 zinc finger protein 6-like4.2e-62100Show/hide
Query:  MKLFGYSVNASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAAGRSPPPNYEMPVEAPPSVGGGEINGE
        MKLFGYSVNASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAAGRSPPPNYEMPVEAPPSVGGGEINGE
Subjt:  MKLFGYSVNASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAAGRSPPPNYEMPVEAPPSVGGGEINGE

Query:  NNGVDLHLSLAPSSTRIFS
        NNGVDLHLSLAPSSTRIFS
Subjt:  NNGVDLHLSLAPSSTRIFS

A0A6J1KZQ7 zinc finger protein 6-like1.2e-5996.64Show/hide
Query:  MKLFGYSVNASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAAGRSPPPNYEMPVEAPPSVGGGEINGE
        MKLFGYSV ASAEPSLGAPC NHIKRF+CQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAAG SPPPNYEMPVEAPPSVGGGEINGE
Subjt:  MKLFGYSVNASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAAGRSPPPNYEMPVEAPPSVGGGEINGE

Query:  NNGVDLHLSLAPSSTRIFS
        NNGVDLHLSLAPSSTRIFS
Subjt:  NNGVDLHLSLAPSSTRIFS

SwissProt top hitse value%identityAlignment
P93751 Zinc finger protein 89.9e-0867.57Show/hide
Query:  NHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQ
        N+ +RF+C +C R F  SQALGGHQNAHKRERQ AK+
Subjt:  NHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQ

Q39264 Zinc finger protein 51.8e-0945.71Show/hide
Query:  MKLFGYSVNA-----------SAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQL
        +KLFG+ + +           S   S        +KR +CQ+CG+EFANSQALGGHQNAHK+ER   K+L
Subjt:  MKLFGYSVNA-----------SAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQL

Q39265 Zinc finger protein 61.0e-1237.69Show/hide
Query:  MKLFGYSV-------NASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQL-------LPRNF-FTPTPPPSAAGRSPPPNYEMP
        +KLFG ++       N S+EP  G+   +  ++++CQ+C REFANSQALGGHQNAHK+ERQL K+        LPR+  F P   P  +  +P P+    
Subjt:  MKLFGYSV-------NASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQL-------LPRNF-FTPTPPPSAAGRSPPPNYEMP

Query:  VEAPPSVGGGEINGENNGVDLHLSLAPSST
           PP                H+ L+PSS+
Subjt:  VEAPPSVGGGEINGENNGVDLHLSLAPSST

Q84WI0 Zinc finger protein GIS5.2e-0949.32Show/hide
Query:  NHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAAGRSPPPNYEMPVEAPPSVGG
        +H +RF+C +C R F  SQALGGHQNAHKRERQLAK+ +   F+ P   P +  R  P     P+ A  S GG
Subjt:  NHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAAGRSPPPNYEMPVEAPPSVGG

Q9FG05 Zinc finger protein GIS23.4e-0847.06Show/hide
Query:  MKLFGYSVNASAEPSLGAPCANH----------IKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQ
        ++LFG+   AS E S      N            KRF+C +C R F  SQALGGHQNAHKRERQ  K+
Subjt:  MKLFGYSVNASAEPSLGAPCANH----------IKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQ

Arabidopsis top hitse value%identityAlignment
AT1G10480.1 zinc finger protein 51.3e-1045.71Show/hide
Query:  MKLFGYSVNA-----------SAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQL
        +KLFG+ + +           S   S        +KR +CQ+CG+EFANSQALGGHQNAHK+ER   K+L
Subjt:  MKLFGYSVNA-----------SAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQL

AT1G67030.1 zinc finger protein 67.3e-1437.69Show/hide
Query:  MKLFGYSV-------NASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQL-------LPRNF-FTPTPPPSAAGRSPPPNYEMP
        +KLFG ++       N S+EP  G+   +  ++++CQ+C REFANSQALGGHQNAHK+ERQL K+        LPR+  F P   P  +  +P P+    
Subjt:  MKLFGYSV-------NASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQL-------LPRNF-FTPTPPPSAAGRSPPPNYEMP

Query:  VEAPPSVGGGEINGENNGVDLHLSLAPSST
           PP                H+ L+PSS+
Subjt:  VEAPPSVGGGEINGENNGVDLHLSLAPSST

AT2G41940.1 zinc finger protein 87.0e-0967.57Show/hide
Query:  NHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQ
        N+ +RF+C +C R F  SQALGGHQNAHKRERQ AK+
Subjt:  NHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQ

AT3G58070.1 C2H2 and C2HC zinc fingers superfamily protein3.7e-1049.32Show/hide
Query:  NHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAAGRSPPPNYEMPVEAPPSVGG
        +H +RF+C +C R F  SQALGGHQNAHKRERQLAK+ +   F+ P   P +  R  P     P+ A  S GG
Subjt:  NHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAAGRSPPPNYEMPVEAPPSVGG

AT5G06650.1 C2H2 and C2HC zinc fingers superfamily protein2.4e-0947.06Show/hide
Query:  MKLFGYSVNASAEPSLGAPCANH----------IKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQ
        ++LFG+   AS E S      N            KRF+C +C R F  SQALGGHQNAHKRERQ  K+
Subjt:  MKLFGYSVNASAEPSLGAPCANH----------IKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTGTTTGGTTATTCAGTGAACGCTAGTGCCGAACCCAGCTTGGGTGCGCCATGTGCGAACCACATCAAGAGATTCCAGTGCCAATTCTGCGGCCGTGAGTTCGC
CAATTCTCAAGCCCTCGGCGGCCACCAGAACGCCCACAAGCGCGAGCGCCAGCTCGCCAAACAACTCCTCCCTCGTAATTTTTTCACTCCCACGCCGCCGCCCTCCGCCG
CCGGAAGATCTCCTCCGCCAAATTATGAAATGCCGGTGGAAGCGCCGCCCTCGGTTGGCGGCGGTGAAATTAACGGCGAAAATAATGGCGTTGATCTCCATCTCAGTCTC
GCACCGTCCTCGACCAGGATCTTCTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTGTTTGGTTATTCAGTGAACGCTAGTGCCGAACCCAGCTTGGGTGCGCCATGTGCGAACCACATCAAGAGATTCCAGTGCCAATTCTGCGGCCGTGAGTTCGC
CAATTCTCAAGCCCTCGGCGGCCACCAGAACGCCCACAAGCGCGAGCGCCAGCTCGCCAAACAACTCCTCCCTCGTAATTTTTTCACTCCCACGCCGCCGCCCTCCGCCG
CCGGAAGATCTCCTCCGCCAAATTATGAAATGCCGGTGGAAGCGCCGCCCTCGGTTGGCGGCGGTGAAATTAACGGCGAAAATAATGGCGTTGATCTCCATCTCAGTCTC
GCACCGTCCTCGACCAGGATCTTCTCTTAA
Protein sequenceShow/hide protein sequence
MKLFGYSVNASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAAGRSPPPNYEMPVEAPPSVGGGEINGENNGVDLHLSL
APSSTRIFS