CuGenDBv2

Gene ID	CmoCh17G003460
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	MYB transcription factor MYB112
Genome location	Cmo_Chr17:2089963..2091372
RNA-Seq Expression	CmoCh17G003460
Synteny	CmoCh17G003460
Gene Ontology terms	NA
InterPro domains	IPR001005 - SANT/Myb domain IPR009057 - Homeobox-like domain superfamily IPR017930 - Myb domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6575096.1 Transcription factor MYB12, partial [Cucurbita argyrosperma subsp. sororia]

4.6e-45

100

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Query:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
        MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
Subjt:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR

KAG7013669.1 AMSH-like ubiquitin thioesterase 3 [Cucurbita argyrosperma subsp. argyrosperma]

1.0e-44

98.86

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Query:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
        MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANG+GSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
Subjt:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR

XP_022959319.1 transcription factor MYB8-like [Cucurbita moschata]

4.6e-45

100

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Query:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
        MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
Subjt:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR

XP_023006408.1 transcription repressor MYB6-like [Cucurbita maxima]

4.6e-45

100

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Query:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
        MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
Subjt:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR

XP_023548704.1 transcription factor MYB8-like [Cucurbita pepo subsp. pepo]

4.6e-45

100

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Query:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
        MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
Subjt:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KCZ1 HTH myb-type domain-containing protein

1.2e-43

95.45

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Query:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
        MG+TPCC KEGLRRGRWTAEEDDKLKKYIEANGEGSW+SLPKNAGLLRCGKSCRLRWINYLRTDLKRGNI+PQEDETILKLHTTLGNR
Subjt:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR

A0A1S3C7U9 myb-related protein Myb4-like

4.2e-44

96.59

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Query:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
        MG+TPCC KEGLRRGRWTAEEDDKLKKYIEANGEGSW+SLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
Subjt:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR

A0A5D3BUZ5 Myb-related protein Myb4-like

4.2e-44

96.59

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Query:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
        MG+TPCC KEGLRRGRWTAEEDDKLKKYIEANGEGSW+SLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
Subjt:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR

A0A6J1H7Q3 transcription factor MYB8-like

2.2e-45

100

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Query:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
        MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
Subjt:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR

A0A6J1L4U4 transcription repressor MYB6-like

2.2e-45

100

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Query:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
        MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
Subjt:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR

SwissProt top hits

e value

%identity

Alignment

O22264 Transcription factor MYB12

1.3e-37

76.14

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Query:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
        MG+ PCC K G++RGRWTAEED  L  YI++NGEGSW+SLPKNAGL RCGKSCRLRWINYLR+DLKRGNITP+E+E ++KLH+TLGNR
Subjt:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR

P27898 Myb-related protein P

6.9e-36

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Query:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
        MG+TPCC K GL+RGRWTAEED  L  YI  +GEGSW+SLPKNAGLLRCGKSCRLRWINYLR D+KRGNI+ +E++ I+KLH TLGNR
Subjt:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR

P81393 Myb-related protein 308

2.1e-32

69.32

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Query:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
        MG++PCC K    +G WT EEDD+L  YI A+GEG W+SLPK AGLLRCGKSCRLRWINYLR DLKRGN T +EDE I+KLH+ LGN+
Subjt:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR

Q9FJ07 Transcription factor MYB111

2.4e-36

77.27

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Query:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
        MG+ PCC K GL+RGRWTAEED+ L KYI+ NGEGSW+SLPK AGLLRCGKSCRLRWINYLR DLKRGNIT  E+E I+KLH+ LGNR
Subjt:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR

Q9LZK4 Transcription factor MYB11

4.1e-36

72.73

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Query:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
        MG+ PCC K G+++GRWTAEED  L  YI++NGEGSW+SLPKNAGL RCGKSCRLRWINYLR+D+KRGNITP+E++ I+KLH+TLG R
Subjt:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR

Arabidopsis top hits

e value

%identity

Alignment

AT2G16720.1 myb domain protein 7

2.5e-33

67.05

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Query:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
        MG++PCC KE + +G WT EED++L  YI+++GEG W+SLP+ AGLLRCGKSCRLRWINYLR DLKRGN T  EDE I+KLH+ LGN+
Subjt:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR

AT2G47460.1 myb domain protein 12

9.0e-39

76.14

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Query:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
        MG+ PCC K G++RGRWTAEED  L  YI++NGEGSW+SLPKNAGL RCGKSCRLRWINYLR+DLKRGNITP+E+E ++KLH+TLGNR
Subjt:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR

AT3G62610.1 myb domain protein 11

2.9e-37

72.73

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Query:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
        MG+ PCC K G+++GRWTAEED  L  YI++NGEGSW+SLPKNAGL RCGKSCRLRWINYLR+D+KRGNITP+E++ I+KLH+TLG R
Subjt:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR

AT4G38620.1 myb domain protein 4

3.3e-33

68.18

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Query:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
        MG++PCC K    +G WT EED++L  YI+A+GEG W+SLPK AGLLRCGKSCRLRWINYLR DLKRGN T +EDE I+KLH+ LGN+
Subjt:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR

AT5G49330.1 myb domain protein 111

1.7e-37

77.27

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Query:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR
        MG+ PCC K GL+RGRWTAEED+ L KYI+ NGEGSW+SLPK AGLLRCGKSCRLRWINYLR DLKRGNIT  E+E I+KLH+ LGNR
Subjt:  MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNR

Sequences

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CDS sequence

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ATGGGGAAAACGCCGTGCTGTGCGAAGGAAGGGCTGAGAAGAGGCCGTTGGACGGCGGAGGAAGATGATAAACTGAAGAAGTATATCGAAGCGAACGGAGAAGGTTCATG
GAAATCGTTGCCGAAGAATGCTGGGCTGTTGAGGTGCGGAAAGAGTTGTAGGTTGAGATGGATTAATTACTTGAGAACGGATTTGAAGCGAGGGAATATCACTCCTCAAG
AAGACGAAACTATTCTCAAGTTGCACACGACTTTAGGCAACCGACAGAATCCCGATGACTCATACATATAG

mRNA sequence

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TAGACTCATAGCTTAGCCATTTTCATTGCTAAAGCTTAGTCGTACTGCTGCCTCTTCCATTCACGAGCATTTCCACTATTTTACAGTGAGAGAGAGAGAGATTTCAGAGA
GAGAAGTTAGAGAAAGAGAGATCTTCCATTGATGCGGCTTGTGGAGGAAGATGAAGAGACTCTGTAAGGCGTTTTGAGAAGGTTTTGTCGATCTTATTTGAGGCAGTGTT
TGTTTAGTTTAAGGGGATGGGGAAAACGCCGTGCTGTGCGAAGGAAGGGCTGAGAAGAGGCCGTTGGACGGCGGAGGAAGATGATAAACTGAAGAAGTATATCGAAGCGA
ACGGAGAAGGTTCATGGAAATCGTTGCCGAAGAATGCTGGGCTGTTGAGGTGCGGAAAGAGTTGTAGGTTGAGATGGATTAATTACTTGAGAACGGATTTGAAGCGAGGG
AATATCACTCCTCAAGAAGACGAAACTATTCTCAAGTTGCACACGACTTTAGGCAACCGACAGAATCCCGATGACTCATACATATAG

Protein sequence

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MGKTPCCAKEGLRRGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNITPQEDETILKLHTTLGNRQNPDDSYI

CmoCh17G003460 (gene) of Cucurbita moschata (Rifu) v1 genome