; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh17G003550 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G003550
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionzinc finger CCHC domain-containing protein 10-like
Genome locationCmo_Chr17:2165187..2167347
RNA-Seq ExpressionCmoCh17G003550
SyntenyCmoCh17G003550
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR036875 - Zinc finger, CCHC-type superfamily
IPR039715 - Zinc finger CCHC domain-containing protein 10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575110.1 Zinc finger CCHC domain-containing protein 10, partial [Cucurbita argyrosperma subsp. sororia]2.4e-13899.34Show/hide
Query:  TSPSTAILSTSHANWIPLHLRYLSKIQILKKQSMSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMY
        TSPSTAILSTSHANWIPLHLRYLSKIQILKKQSMSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMY
Subjt:  TSPSTAILSTSHANWIPLHLRYLSKIQILKKQSMSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMY

Query:  LMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHR
        LMSTEKAVRLGERKDIKVSMS+AGGAAAQCQKCYQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHR
Subjt:  LMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHR

Query:  SEPKSNSDSEASVFETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRRHSRK
        SEPKSNSDSEASVFETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDS SESESDSDHERSRRKSRRHSRK
Subjt:  SEPKSNSDSEASVFETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRRHSRK

Query:  R
        R
Subjt:  R

KAG7013679.1 Zinc finger CCHC domain-containing protein 10 [Cucurbita argyrosperma subsp. argyrosperma]2.9e-12099.63Show/hide
Query:  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKC
        MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKC
Subjt:  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKC

Query:  YQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSVTGSDDSSEES
        YQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSVTGSDDSSEES
Subjt:  YQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSVTGSDDSSEES

Query:  SSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRRHSRKR
        SSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDS SESESDSDHERSRRKSRRHSRKR
Subjt:  SSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRRHSRKR

XP_022959515.1 zinc finger CCHC domain-containing protein 10-like [Cucurbita moschata]3.4e-121100Show/hide
Query:  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKC
        MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKC
Subjt:  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKC

Query:  YQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSVTGSDDSSEES
        YQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSVTGSDDSSEES
Subjt:  YQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSVTGSDDSSEES

Query:  SSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRRHSRKR
        SSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRRHSRKR
Subjt:  SSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRRHSRKR

XP_023006369.1 zinc finger CCHC domain-containing protein 10 [Cucurbita maxima]1.6e-11898.51Show/hide
Query:  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKC
        MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKC
Subjt:  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKC

Query:  YQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSVTGSDDSSEES
        YQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLE+DNPDSGDEEKKTKK+QLKKKSKRKHRSE KSNSDSEASVFETDSGSSSVTGSDDSSEES
Subjt:  YQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSVTGSDDSSEES

Query:  SSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRRHSRKR
        SSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDS SESESDSDHERSRRKSRRHSRKR
Subjt:  SSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRRHSRKR

XP_023548562.1 zinc finger CCHC domain-containing protein 10-like [Cucurbita pepo subsp. pepo]1.5e-11697.76Show/hide
Query:  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKC
        MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKC
Subjt:  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKC

Query:  YQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSVTGSDDSSEES
        YQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSVTGSDDSSEES
Subjt:  YQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSVTGSDDSSEES

Query:  SSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRRHSRKR
        SSDYSSSSDSESE    RRRRKKQKRGRRKRRYSSSSDSSDSDS SE ESDSDHERSRRKSRRHSRKR
Subjt:  SSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRRHSRKR

TrEMBL top hitse value%identityAlignment
A0A0A0LJ33 Uncharacterized protein1.3e-10592.16Show/hide
Query:  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKC
        MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAA AAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIK SMS AGGAAAQCQKC
Subjt:  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKC

Query:  YQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSVTGSDDSSEES
        YQ GHWTYECKNERVYISRPSRTQQLKNPKLRMKM VSLELDNPD G+E+K   KK  KKKSKRKHRS  KSNSDSEASVFETDSGSSSVT SDDSSEES
Subjt:  YQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSVTGSDDSSEES

Query:  SSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRRHSRKR
        SSDYSSSS+SESERS  RRRRKKQKRGRRKRRYSSSSDSSDSDS SESESDSD+ERSRRKSRRHSRKR
Subjt:  SSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRRHSRKR

A0A1S3CDQ2 zinc finger CCHC domain-containing protein 101.8e-10491.42Show/hide
Query:  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKC
        MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAA AAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIK SMSSAGGAAAQCQKC
Subjt:  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKC

Query:  YQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSVTGSDDSSEES
        YQ GHWTYECKNERVYISRPSRTQQLKNPKLRMKM VSLELDNPD G+EEK   KK  K KSKRKHRS  KS+SDSEASVFETDSGSSSVT SDDSSEES
Subjt:  YQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSVTGSDDSSEES

Query:  SSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRRHSRKR
        SSDYSSSS+SE ERS  RRRRKKQKRGRRKRRYSSSSDSSDSDS SESESDSD+ERSRRKSRRHSR+R
Subjt:  SSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRRHSRKR

A0A5A7TW64 Zinc finger CCHC domain-containing protein 101.8e-10491.42Show/hide
Query:  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKC
        MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAA AAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIK SMSSAGGAAAQCQKC
Subjt:  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKC

Query:  YQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSVTGSDDSSEES
        YQ GHWTYECKNERVYISRPSRTQQLKNPKLRMKM VSLELDNPD G+EEK   KK  K KSKRKHRS  KS+SDSEASVFETDSGSSSVT SDDSSEES
Subjt:  YQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSVTGSDDSSEES

Query:  SSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRRHSRKR
        SSDYSSSS+SE ERS  RRRRKKQKRGRRKRRYSSSSDSSDSDS SESESDSD+ERSRRKSRRHSR+R
Subjt:  SSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRRHSRKR

A0A6J1H6H5 zinc finger CCHC domain-containing protein 10-like1.7e-121100Show/hide
Query:  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKC
        MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKC
Subjt:  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKC

Query:  YQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSVTGSDDSSEES
        YQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSVTGSDDSSEES
Subjt:  YQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSVTGSDDSSEES

Query:  SSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRRHSRKR
        SSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRRHSRKR
Subjt:  SSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRRHSRKR

A0A6J1L1Z2 zinc finger CCHC domain-containing protein 107.7e-11998.51Show/hide
Query:  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKC
        MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKC
Subjt:  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKC

Query:  YQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSVTGSDDSSEES
        YQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLE+DNPDSGDEEKKTKK+QLKKKSKRKHRSE KSNSDSEASVFETDSGSSSVTGSDDSSEES
Subjt:  YQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSVTGSDDSSEES

Query:  SSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRRHSRKR
        SSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDS SESESDSDHERSRRKSRRHSRKR
Subjt:  SSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRRHSRKR

SwissProt top hitse value%identityAlignment
Q5EB97 Zinc finger CCHC domain-containing protein 101.9e-0537.57Show/hide
Query:  QCQKCYQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSVTGSDD
        +CQKC + GHWTYECK +R Y+ RPSRT +LK   L+ K    L+    ++  E K  KK++ K  +         S S SE+    + S   S      
Subjt:  QCQKCYQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSVTGSDD

Query:  SSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRRHSRKR
        SS  SSS YSSSS S S                     SSSS SSDSDS S S S S  E S        RK+
Subjt:  SSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRRHSRKR

Q8TBK6 Zinc finger CCHC domain-containing protein 107.2e-0534.08Show/hide
Query:  VSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETD
        + +S A     +CQKC + GHWTYEC  +R Y+ RPSRT +LK   L+ K    L   +    + E+K KKK+ K  +     S   S SDS +   ET 
Subjt:  VSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETD

Query:  SGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRR
        + SSS     D S  SSS  +SS+ S S                     S S  SS S S + ++S SD E  ++K ++
Subjt:  SGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRR

Q9CX48 Zinc finger CCHC domain-containing protein 102.5e-0540.12Show/hide
Query:  QCQKCYQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSVTGSDD
        +CQKC + GHWTYECK +R Y+ RPSRT +LK  K   +    L L +    + EKK K    KKK  +   S   S+SDS AS    +S S S T +  
Subjt:  QCQKCYQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSVTGSDD

Query:  SSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSR
        SSE+S SD S SS S S  S                   SSS SS S S SES SD + ++ ++K +
Subjt:  SSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSR

Arabidopsis top hitse value%identityAlignment
AT5G49400.1 zinc knuckle (CCHC-type) family protein4.4e-7467.14Show/hide
Query:  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAG---GAAAQC
        MS+ K+EKSQ AA+RIKAA L+AAKGLSR QAERAA AAARNVNAYGQKEEGPSRWQEKRE KRQMYLMSTEKAVRLGERKD  +S S+ G    AA+QC
Subjt:  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAG---GAAAQC

Query:  QKCYQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEK-------KTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSV
        QKC+Q+GHWTYECKNERVYISRPSRTQQLKNPKLR K +V  +LD  D  DEE+       K + ++  KKSKRKHRS+  S SDSEASVFETD      
Subjt:  QKCYQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEK-------KTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSV

Query:  TGSDDSSEESSSDYSSSSDSESERSRRRRRRK-----KQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRRHSRKR
          SD SS ESSS+YSSSSDSE ER RRR+ +K     KQ++ RR+R  SSSS+SS+S+S S+S+SD D  R ++KS+RHS KR
Subjt:  TGSDDSSEESSSDYSSSSDSESERSRRRRRRK-----KQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRRHSRKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTACTTTAGTGCTATGACTCCCTCCATTTTCTCATCTCTAGCATCCACATCGCCTTCTACTGCGATCCTCTCTACTTCGCATGCGAACTGGATTCCGCTTCATCT
TCGATACCTAAGCAAGATTCAGATATTGAAAAAACAAAGCATGTCTAGTAAGAAGGAAGAAAAGTCACAAGCAGCTGCCGAAAGGATTAAGGCTGCGGCTCTTAGTGCTG
CAAAAGGCCTTAGTCGTGCTCAGGCTGAACGAGCAGCTACGGCTGCTGCTCGAAATGTTAATGCTTATGGGCAAAAGGAAGAAGGGCCGAGCAGATGGCAGGAGAAAAGA
GAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTAAGATTGGGTGAAAGAAAGGACATTAAGGTCTCCATGTCTAGTGCGGGCGGAGCTGCTGCACAGTG
CCAGAAATGTTATCAGTCGGGACACTGGACATATGAATGCAAAAATGAACGAGTTTACATATCCCGACCATCTCGAACTCAACAACTCAAAAACCCGAAGTTGAGGATGA
AGATGGCAGTCTCATTAGAGCTGGACAACCCAGATTCTGGTGATGAGGAGAAGAAGACCAAGAAGAAGCAATTGAAGAAGAAAAGTAAAAGAAAGCATCGGTCCGAACCA
AAATCCAATAGCGATAGCGAGGCTTCTGTATTTGAAACCGATAGTGGGTCATCATCAGTTACTGGATCTGATGATTCTTCTGAAGAAAGCAGTTCAGATTACAGTTCTTC
GTCTGATTCGGAGTCGGAAAGGAGTCGAAGAAGGAGAAGGAGAAAGAAGCAGAAGAGGGGGAGGAGGAAGAGGAGGTACAGCTCGTCTTCTGATTCTTCTGATTCAGACT
CGGGGTCTGAATCAGAGTCTGATTCTGATCATGAACGTAGTAGGAGGAAGAGTCGAAGGCACAGCAGAAAACGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTTACTTTAGTGCTATGACTCCCTCCATTTTCTCATCTCTAGCATCCACATCGCCTTCTACTGCGATCCTCTCTACTTCGCATGCGAACTGGATTCCGCTTCATCT
TCGATACCTAAGCAAGATTCAGATATTGAAAAAACAAAGCATGTCTAGTAAGAAGGAAGAAAAGTCACAAGCAGCTGCCGAAAGGATTAAGGCTGCGGCTCTTAGTGCTG
CAAAAGGCCTTAGTCGTGCTCAGGCTGAACGAGCAGCTACGGCTGCTGCTCGAAATGTTAATGCTTATGGGCAAAAGGAAGAAGGGCCGAGCAGATGGCAGGAGAAAAGA
GAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTAAGATTGGGTGAAAGAAAGGACATTAAGGTCTCCATGTCTAGTGCGGGCGGAGCTGCTGCACAGTG
CCAGAAATGTTATCAGTCGGGACACTGGACATATGAATGCAAAAATGAACGAGTTTACATATCCCGACCATCTCGAACTCAACAACTCAAAAACCCGAAGTTGAGGATGA
AGATGGCAGTCTCATTAGAGCTGGACAACCCAGATTCTGGTGATGAGGAGAAGAAGACCAAGAAGAAGCAATTGAAGAAGAAAAGTAAAAGAAAGCATCGGTCCGAACCA
AAATCCAATAGCGATAGCGAGGCTTCTGTATTTGAAACCGATAGTGGGTCATCATCAGTTACTGGATCTGATGATTCTTCTGAAGAAAGCAGTTCAGATTACAGTTCTTC
GTCTGATTCGGAGTCGGAAAGGAGTCGAAGAAGGAGAAGGAGAAAGAAGCAGAAGAGGGGGAGGAGGAAGAGGAGGTACAGCTCGTCTTCTGATTCTTCTGATTCAGACT
CGGGGTCTGAATCAGAGTCTGATTCTGATCATGAACGTAGTAGGAGGAAGAGTCGAAGGCACAGCAGAAAACGCTAGTCAAGGTAATCTCGATCGATTGAGTGAAGCAAA
TTAGAACGGTCGATGTATAATTATAATTGCAACTGTAGTCAGATTAGAGATGTGAGATCATTCAGCTTCTTGTTTTAGTCGTTCAACAACTCGAACTAGGGACGCTCTCT
GGGGGAATGTTATGGCGAATCTATGAGTTGTTTTGTGTAAACTGAAGTTTGGGCTTTTTTTCTTCTAATAATTGAGTTTTAAGCATCTCCTTCCTTTGCTCTTTTCTCAT
GCATGTA
Protein sequenceShow/hide protein sequence
MTYFSAMTPSIFSSLASTSPSTAILSTSHANWIPLHLRYLSKIQILKKQSMSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR
EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEP
KSNSDSEASVFETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDHERSRRKSRRHSRKR