CuGenDBv2

Gene ID	CmoCh17G003970
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Reverse transcriptase
Genome location	Cmo_Chr17:2618814..2627983
RNA-Seq Expression	CmoCh17G003970
Synteny	CmoCh17G003970
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0015074 - DNA integration (biological process) GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process) GO:1901800 - positive regulation of proteasomal protein catabolic process (biological process) GO:0005634 - nucleus (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0000502 - proteasome complex (cellular component) GO:0016887 - ATPase activity (molecular function) GO:0036402 - proteasome-activating ATPase activity (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0008194 - UDP-glycosyltransferase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0004519 - endonuclease activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	IPR043502 - DNA/RNA polymerase superfamily IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR041588 - Integrase zinc-binding domain IPR041373 - Reverse transcriptase, RNase H-like domain IPR036397 - Ribonuclease H superfamily IPR012337 - Ribonuclease H-like superfamily IPR001584 - Integrase, catalytic core IPR000477 - Reverse transcriptase domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025848.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

75.56

Show/hide

Query:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK
        M PAEL+ELK QLQ+LLDKGFIRPSVSPWGAPVLFVKKKDGS+RLCIDYRELNKVT+KN+YPLPRIDDLFDQL+GA+VFSKIDLRSGYHQLRIR+ DIPK
Subjt:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK

Query:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG
        TAFRSRYGHYEF+VMSFGLTNAPAVFM+LMNRVFKEFLD+FVIVFIDDIL+YSK+EAEHEEHL +VL  LR  +LYAKFSKCEFWL +V FLGHVVSS G
Subjt:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG

Query:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL
        ++VDPAKIEAV  W RP+TV+E+RSFLGLAGYYRRFV+DFS+I+S LTQLT+KG PF+W+ ACE+SFQELK++LV+APVLTVPDGSGN V+YSDAS KGL
Subjt:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL

Query:  GCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKIQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADA
        GCVLMQ+GKV+AYASRQLK +E+NYPTHDLELAAVVFALK WRHYLYGEKIQ++TDHKSLKY FTQKELNMRQRRWLELVKDYD EILYHPGKANVVADA
Subjt:  GCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKIQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADA

Query:  LSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLCVPRDKKILK
        LSRK  H++A+ITKQ  +  + +RA I V +   TAQ+ Q+T+QPTLR++II AQ  D +L +     E E+ EG+SISSD GL+++ RLCVP D  +  
Subjt:  LSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLCVPRDKKILK

Query:  DIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNVIWVVVDRLT
        +++TEAH + +T HPGSTKMYQDL+  YWW GMK+++A+FVSRCL CQQVKAPRQ PAGLLQPL VP WKWE+V MDFI+GLPKT + + VIWVVVDRLT
Subjt:  DIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNVIWVVVDRLT

Query:  KMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDFAGCWDEHLP
        K AHF+PGK+TY   +W QLY+ EIVRLHGVPVSI+SDRD RFTS+FWK LQ ALGT+L FSTAFHPQTDGQTERLNQILEDMLRACVL+F+G WD HL 
Subjt:  KMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDFAGCWDEHLP

Query:  LIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDLEFEVGDHVFVKVAPMRGVTRF
        L+EFAYNNSYQATI MAPFEA+YG+ CR+PV W EVG Q++LGPELVQ TNAA+QKI+ R+LTAQSRQKSYAD+RR+DLEFEVGD VF+KVAPM+GV RF
Subjt:  LIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDLEFEVGDHVFVKVAPMRGVTRF

Query:  GKKGKLSPRFVGPFEILERVGAVAYKIALPPNLAAVHNVFHVSMLRKYTSDPTHVIEHETLPLREDLSYEVRPSKILARDTRRLRNKVIPLVKVAW
         KKGKLSPRFVGPFEILER+G VAY++ALPP+ AAVH+VFH+SMLRKY +DPTHV++ E L + E+LSYE +P ++LAR+ ++LR++ IPLVK+ W
Subjt:  GKKGKLSPRFVGPFEILERVGAVAYKIALPPNLAAVHNVFHVSMLRKYTSDPTHVIEHETLPLREDLSYEVRPSKILARDTRRLRNKVIPLVKVAW

KAA0031437.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

75.56

Show/hide

Query:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK
        M PAEL+ELK QLQ+LLDKGFIRPSVSPWGAPVLFVKKKDGS+RLCIDYRELNKVT+KN+YPLPRIDDLFDQL+GA+VFSKIDLRSGYHQLRIR+ DIPK
Subjt:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK

Query:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG
        TAFRSRYGHYEF+VMSFGLTNAPAVFM+LMNRVFKEFLD+FVIVFIDDIL+YSK+EAEHEEHL +VL  LR  +LYAKFSKCEFWL +V FLGHVVSS G
Subjt:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG

Query:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL
        ++VDPAKIEAV  W RP+TV+E+RSFLGLAGYYRRFV+DFS+I+S LTQLT+KG PF+W+ ACE+SFQELK++LV+APVLTVPDGSGN V+YSDAS KGL
Subjt:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL

Query:  GCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKIQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADA
        GCVLMQ+GKV+AYASRQLK +E+NYPTHDLELAAVVFALK WRHYLYGEKIQ++TDHKSLKY FTQKELNMRQRRWLELVKDYD EILYHPGKANVVADA
Subjt:  GCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKIQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADA

Query:  LSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLCVPRDKKILK
        LSRK  H++A+ITKQ  +  + +RA I V +   TAQ+ Q+T+QPTLR++II AQ  D +L +     E E+ EG+SISSD GL+++ RLCVP D  +  
Subjt:  LSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLCVPRDKKILK

Query:  DIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNVIWVVVDRLT
        +++TEAH + +T HPGSTKMYQDL+  YWW GMK+++A+FVSRCL CQQVKAPRQ PAGLLQPL VP WKWE+V MDFI+GLPKT + + VIWVVVDRLT
Subjt:  DIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNVIWVVVDRLT

Query:  KMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDFAGCWDEHLP
        K AHF+PGK+TY   +W QLY+ EIVRLHGVPVSI+SDRD RFTS+FWK LQ ALGT+L FSTAFHPQTDGQTERLNQILEDMLRACVL+F+G WD HL 
Subjt:  KMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDFAGCWDEHLP

Query:  LIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDLEFEVGDHVFVKVAPMRGVTRF
        L+EFAYNNSYQATI MAPFEA+YG+ CR+PV W EVG Q++LGPELVQ TNAA+QKI+ R+LTAQSRQKSYAD+RR+DLEFEVGD VF+KVAPM+GV RF
Subjt:  LIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDLEFEVGDHVFVKVAPMRGVTRF

Query:  GKKGKLSPRFVGPFEILERVGAVAYKIALPPNLAAVHNVFHVSMLRKYTSDPTHVIEHETLPLREDLSYEVRPSKILARDTRRLRNKVIPLVKVAW
         KKGKLSPRFVGPFEILER+G VAY++ALPP+ AAVH+VFH+SMLRKY +DPTHV++ E L + E+LSYE +P ++LAR+ ++LR++ IPLVK+ W
Subjt:  GKKGKLSPRFVGPFEILERVGAVAYKIALPPNLAAVHNVFHVSMLRKYTSDPTHVIEHETLPLREDLSYEVRPSKILARDTRRLRNKVIPLVKVAW

KAA0033825.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

75.56

Show/hide

Query:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK
        M PAEL+ELK QLQ+LLDKGFIRPSVSPWGAPVLFVKKKDGS+RLCIDYRELNKVT+KN+YPLPRIDDLFDQL+GA+VFSKIDLRSGYHQLRIR+ DIPK
Subjt:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK

Query:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG
        TAFRSRYGHYEF+VMSFGLTNAPAVFM+LMNRVFKEFLD+FVIVFIDDIL+YSK+EAEHEEHL +VL  LR  +LYAKFSKCEFWL +V FLGHVVSS G
Subjt:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG

Query:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL
        ++VDPAKIEAV  W RP+TV+E+RSFLGLAGYYRRFV+DFS+I+S LTQLT+KG PF+W+ ACE+SFQELK++LV+APVLTVPDGSGN V+YSDAS KGL
Subjt:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL

Query:  GCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKIQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADA
        GCVLMQ+GKV+AYASRQLK +E+NYPTHDLELAAVVFALK WRHYLYGEKIQ++TDHKSLKY FTQKELNMRQRRWLELVKDYD EILYHPGKANVVADA
Subjt:  GCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKIQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADA

Query:  LSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLCVPRDKKILK
        LSRK  H++A+ITKQ  +  + +RA I V +   TAQ+ Q+T+QPTLR++II AQ  D +L +     E E+ EG+SISSD GL+++ RLCVP D  +  
Subjt:  LSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLCVPRDKKILK

Query:  DIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNVIWVVVDRLT
        +++TEAH + +T HPGSTKMYQDL+  YWW GMK+++A+FVSRCL CQQVKAPRQ PAGLLQPL VP WKWE+V MDFI+GLPKT + + VIWVVVDRLT
Subjt:  DIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNVIWVVVDRLT

Query:  KMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDFAGCWDEHLP
        K AHF+PGK+TY   +W QLY+ EIVRLHGVPVSI+SDRD RFTS+FWK LQ ALGT+L FSTAFHPQTDGQTERLNQILEDMLRACVL+F+G WD HL 
Subjt:  KMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDFAGCWDEHLP

Query:  LIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDLEFEVGDHVFVKVAPMRGVTRF
        L+EFAYNNSYQATI MAPFEA+YG+ CR+PV W EVG Q++LGPELVQ TNAA+QKI+ R+LTAQSRQKSYAD+RR+DLEFEVGD VF+KVAPM+GV RF
Subjt:  LIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDLEFEVGDHVFVKVAPMRGVTRF

Query:  GKKGKLSPRFVGPFEILERVGAVAYKIALPPNLAAVHNVFHVSMLRKYTSDPTHVIEHETLPLREDLSYEVRPSKILARDTRRLRNKVIPLVKVAW
         KKGKLSPRFVGPFEILER+G VAY++ALPP+ AAVH+VFH+SMLRKY +DPTHV++ E L + E+LSYE +P ++LAR+ ++LR++ IPLVK+ W
Subjt:  GKKGKLSPRFVGPFEILERVGAVAYKIALPPNLAAVHNVFHVSMLRKYTSDPTHVIEHETLPLREDLSYEVRPSKILARDTRRLRNKVIPLVKVAW

TYK28422.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

75.56

Show/hide

Query:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK
        M PAEL+ELK QLQ+LLDKGFIRPSVSPWGAPVLFVKKKDGS+RLCIDYRELNKVT+KN+YPLPRIDDLFDQL+GA+VFSKIDLRSGYHQLRIR+ DIPK
Subjt:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK

Query:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG
        TAFRSRYGHYEF+VMSFGLTNAPAVFM+LMNRVFKEFLD+FVIVFIDDIL+YSK+EAEHEEHL +VL  LR  +LYAKFSKCEFWL +V FLGHVVSS G
Subjt:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG

Query:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL
        ++VDPAKIEAV  W RP+TV+E+RSFLGLAGYYRRFV+DFS+I+S LTQLT+KG PF+W+ ACE+SFQELK++LV+APVLTVPDGSGN V+YSDAS KGL
Subjt:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL

Query:  GCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKIQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADA
        GCVLMQ+GKV+AYASRQLK +E+NYPTHDLELAAVVFALK WRHYLYGEKIQ++TDHKSLKY FTQKELNMRQRRWLELVKDYD EILYHPGKANVVADA
Subjt:  GCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKIQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADA

Query:  LSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLCVPRDKKILK
        LSRK  H++A+ITKQ  +  + +RA I V +   TAQ+ Q+T+QPTLR++II AQ  D +L +     E E+ EG+SISSD GL+++ RLCVP D  +  
Subjt:  LSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLCVPRDKKILK

Query:  DIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNVIWVVVDRLT
        +++TEAH + +T HPGSTKMYQDL+  YWW GMK+++A+FVSRCL CQQVKAPRQ PAGLLQPL VP WKWE+V MDFI+GLPKT + + VIWVVVDRLT
Subjt:  DIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNVIWVVVDRLT

Query:  KMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDFAGCWDEHLP
        K AHF+PGK+TY   +W QLY+ EIVRLHGVPVSI+SDRD RFTS+FWK LQ ALGT+L FSTAFHPQTDGQTERLNQILEDMLRACVL+F+G WD HL 
Subjt:  KMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDFAGCWDEHLP

Query:  LIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDLEFEVGDHVFVKVAPMRGVTRF
        L+EFAYNNSYQATI MAPFEA+YG+ CR+PV W EVG Q++LGPELVQ TNAA+QKI+ R+LTAQSRQKSYAD+RR+DLEFEVGD VF+KVAPM+GV RF
Subjt:  LIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDLEFEVGDHVFVKVAPMRGVTRF

Query:  GKKGKLSPRFVGPFEILERVGAVAYKIALPPNLAAVHNVFHVSMLRKYTSDPTHVIEHETLPLREDLSYEVRPSKILARDTRRLRNKVIPLVKVAW
         KKGKLSPRFVGPFEILER+G VAY++ALPP+ AAVH+VFH+SMLRKY +DPTHV++ E L + E+LSYE +P ++LAR+ ++LR++ IPLVK+ W
Subjt:  GKKGKLSPRFVGPFEILERVGAVAYKIALPPNLAAVHNVFHVSMLRKYTSDPTHVIEHETLPLREDLSYEVRPSKILARDTRRLRNKVIPLVKVAW

XP_022931734.1 uncharacterized protein LOC111437896 [Cucurbita moschata]

0.0e+00

82.33

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Query:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK
        M PAEL+ELK QLQ+LLDKGFIRPSVSPWGAPVLFVKKKDG++RLCIDYRELNKVTIKNKYPLPRIDDLFDQL+GA+VFSKIDLRSGYHQ+RIREEDIPK
Subjt:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK

Query:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG
        TAFRSRYGHYEF+VMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSE EHE HLR+VLT+LR  +LYAKFSKCEFWL EVAFLGHVVSS G
Subjt:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG

Query:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL
        +TVDPAKIEAV+KWPRPTTVTEVRSFLGLAGYYRRF++DFSK+S+ALTQLTKKGKPF+WT  CEQSF ELK+RLV+APVLTVPDGSG LVVYSDASGKGL
Subjt:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL

Query:  GCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKIQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADA
        GCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVV+ALKTWRHYLYGE++QV+TDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADA
Subjt:  GCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKIQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADA

Query:  LSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLCVPRDKKILK
        LSRK  HTSA+IT+Q+ +QDE++RAGI+V+ +G TAQ+ Q+++QPTL++RII+AQR+D HL ++W Q E ERP GYS+SS+GGL+W++RLCVPRD+KIL+
Subjt:  LSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLCVPRDKKILK

Query:  DIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNVIWVVVDRLT
        +IMTEAH+TSYTFHPGSTKMYQDLK  YWWPGMKK++AE+VSRCLTCQQVKAPRQRPAGLLQPL +PQWKWE + MDFI+GLPKT++ FNVIWV+VDRLT
Subjt:  DIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNVIWVVVDRLT

Query:  KMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDFAGCWDEHLP
        K+AHFIPG+ TYRVD+WA+LY++EI+RLHGVPV+IVSDRD +FTS FWK LQKALGTQL+F+TAFHPQTDGQTERLNQ LEDMLRACV+DFAGCWDEHL 
Subjt:  KMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDFAGCWDEHLP

Query:  LIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDLEFEVGDHVFVKVAPMRGVTRF
        L+EFAYNNSYQATIQMAPFEA+YGRRCRTP+FWEEVG +QLLGPELVQ TNAAVQKIKQRIL+AQSRQKSYAD RR+DLEF VGDHVF+KVAPMRGV+  
Subjt:  LIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDLEFEVGDHVFVKVAPMRGVTRF

Query:  GKKGKLSPRFVGPFEILERVGAVAYKIALPPN
         + G++   F     I E     AY+    PN
Subjt:  GKKGKLSPRFVGPFEILERVGAVAYKIALPPN

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TEQ2 Reverse transcriptase

0.0e+00

75.56

Show/hide

Query:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK
        M PAEL+ELK QLQ+LLDKGFIRPSVSPWGAPVLFVKKKDGS+RLCIDYRELNKVT+KN+YPLPRIDDLFDQL+GA+VFSKIDLRSGYHQLRIR+ DIPK
Subjt:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK

Query:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG
        TAFRSRYGHYEF+VMSFGLTNAPAVFM+LMNRVFKEFLD+FVIVFIDDIL+YSK+EAEHEEHL +VL  LR  +LYAKFSKCEFWL +V FLGHVVSS G
Subjt:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG

Query:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL
        ++VDPAKIEAV  W RP+TV+E+RSFLGLAGYYRRFV+DFS+I+S LTQLT+KG PF+W+ ACE+SFQELK++LV+APVLTVPDGSGN V+YSDAS KGL
Subjt:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL

Query:  GCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKIQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADA
        GCVLMQ+GKV+AYASRQLK +E+NYPTHDLELAAVVFALK WRHYLYGEKIQ++TDHKSLKY FTQKELNMRQRRWLELVKDYD EILYHPGKANVVADA
Subjt:  GCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKIQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADA

Query:  LSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLCVPRDKKILK
        LSRK  H++A+ITKQ  +  + +RA I V +   TAQ+ Q+T+QPTLR++II AQ  D +L +     E E+ EG+SISSD GL+++ RLCVP D  +  
Subjt:  LSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLCVPRDKKILK

Query:  DIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNVIWVVVDRLT
        +++TEAH + +T HPGSTKMYQDL+  YWW GMK+++A+FVSRCL CQQVKAPRQ PAGLLQPL VP WKWE+V MDFI+GLPKT + + VIWVVVDRLT
Subjt:  DIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNVIWVVVDRLT

Query:  KMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDFAGCWDEHLP
        K AHF+PGK+TY   +W QLY+ EIVRLHGVPVSI+SDRD RFTS+FWK LQ ALGT+L FSTAFHPQTDGQTERLNQILEDMLRACVL+F+G WD HL 
Subjt:  KMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDFAGCWDEHLP

Query:  LIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDLEFEVGDHVFVKVAPMRGVTRF
        L+EFAYNNSYQATI MAPFEA+YG+ CR+PV W EVG Q++LGPELVQ TNAA+QKI+ R+LTAQSRQKSYAD+RR+DLEFEVGD VF+KVAPM+GV RF
Subjt:  LIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDLEFEVGDHVFVKVAPMRGVTRF

Query:  GKKGKLSPRFVGPFEILERVGAVAYKIALPPNLAAVHNVFHVSMLRKYTSDPTHVIEHETLPLREDLSYEVRPSKILARDTRRLRNKVIPLVKVAW
         KKGKLSPRFVGPFEILER+G VAY++ALPP+ AAVH+VFH+SMLRKY +DPTHV++ E L + E+LSYE +P ++LAR+ ++LR++ IPLVK+ W
Subjt:  GKKGKLSPRFVGPFEILERVGAVAYKIALPPNLAAVHNVFHVSMLRKYTSDPTHVIEHETLPLREDLSYEVRPSKILARDTRRLRNKVIPLVKVAW

A0A5A7TSL0 Reverse transcriptase

0.0e+00

75.56

Show/hide

Query:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK
        M PAEL+ELK QLQ+LLDKGFIRPSVSPWGAPVLFVKKKDGS+RLCIDYRELNKVT+KN+YPLPRIDDLFDQL+GA+VFSKIDLRSGYHQLRIR+ DIPK
Subjt:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK

Query:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG
        TAFRSRYGHYEF+VMSFGLTNAPAVFM+LMNRVFKEFLD+FVIVFIDDIL+YSK+EAEHEEHL +VL  LR  +LYAKFSKCEFWL +V FLGHVVSS G
Subjt:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG

Query:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL
        ++VDPAKIEAV  W RP+TV+E+RSFLGLAGYYRRFV+DFS+I+S LTQLT+KG PF+W+ ACE+SFQELK++LV+APVLTVPDGSGN V+YSDAS KGL
Subjt:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL

Query:  GCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKIQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADA
        GCVLMQ+GKV+AYASRQLK +E+NYPTHDLELAAVVFALK WRHYLYGEKIQ++TDHKSLKY FTQKELNMRQRRWLELVKDYD EILYHPGKANVVADA
Subjt:  GCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKIQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADA

Query:  LSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLCVPRDKKILK
        LSRK  H++A+ITKQ  +  + +RA I V +   TAQ+ Q+T+QPTLR++II AQ  D +L +     E E+ EG+SISSD GL+++ RLCVP D  +  
Subjt:  LSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLCVPRDKKILK

Query:  DIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNVIWVVVDRLT
        +++TEAH + +T HPGSTKMYQDL+  YWW GMK+++A+FVSRCL CQQVKAPRQ PAGLLQPL VP WKWE+V MDFI+GLPKT + + VIWVVVDRLT
Subjt:  DIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNVIWVVVDRLT

Query:  KMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDFAGCWDEHLP
        K AHF+PGK+TY   +W QLY+ EIVRLHGVPVSI+SDRD RFTS+FWK LQ ALGT+L FSTAFHPQTDGQTERLNQILEDMLRACVL+F+G WD HL 
Subjt:  KMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDFAGCWDEHLP

Query:  LIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDLEFEVGDHVFVKVAPMRGVTRF
        L+EFAYNNSYQATI MAPFEA+YG+ CR+PV W EVG Q++LGPELVQ TNAA+QKI+ R+LTAQSRQKSYAD+RR+DLEFEVGD VF+KVAPM+GV RF
Subjt:  LIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDLEFEVGDHVFVKVAPMRGVTRF

Query:  GKKGKLSPRFVGPFEILERVGAVAYKIALPPNLAAVHNVFHVSMLRKYTSDPTHVIEHETLPLREDLSYEVRPSKILARDTRRLRNKVIPLVKVAW
         KKGKLSPRFVGPFEILER+G VAY++ALPP+ AAVH+VFH+SMLRKY +DPTHV++ E L + E+LSYE +P ++LAR+ ++LR++ IPLVK+ W
Subjt:  GKKGKLSPRFVGPFEILERVGAVAYKIALPPNLAAVHNVFHVSMLRKYTSDPTHVIEHETLPLREDLSYEVRPSKILARDTRRLRNKVIPLVKVAW

A0A5A7UBS1 Reverse transcriptase

0.0e+00

75.56

Show/hide

Query:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK
        M PAEL+ELK QLQ+LLDKGFIRPSVSPWGAPVLFVKKKDGS+RLCIDYRELNKVT+KN+YPLPRIDDLFDQL+GA+VFSKIDLRSGYHQLRIR+ DIPK
Subjt:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK

Query:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG
        TAFRSRYGHYEF+VMSFGLTNAPAVFM+LMNRVFKEFLD+FVIVFIDDIL+YSK+EAEHEEHL +VL  LR  +LYAKFSKCEFWL +V FLGHVVSS G
Subjt:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG

Query:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL
        ++VDPAKIEAV  W RP+TV+E+RSFLGLAGYYRRFV+DFS+I+S LTQLT+KG PF+W+ ACE+SFQELK++LV+APVLTVPDGSGN V+YSDAS KGL
Subjt:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL

Query:  GCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKIQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADA
        GCVLMQ+GKV+AYASRQLK +E+NYPTHDLELAAVVFALK WRHYLYGEKIQ++TDHKSLKY FTQKELNMRQRRWLELVKDYD EILYHPGKANVVADA
Subjt:  GCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKIQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADA

Query:  LSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLCVPRDKKILK
        LSRK  H++A+ITKQ  +  + +RA I V +   TAQ+ Q+T+QPTLR++II AQ  D +L +     E E+ EG+SISSD GL+++ RLCVP D  +  
Subjt:  LSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLCVPRDKKILK

Query:  DIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNVIWVVVDRLT
        +++TEAH + +T HPGSTKMYQDL+  YWW GMK+++A+FVSRCL CQQVKAPRQ PAGLLQPL VP WKWE+V MDFI+GLPKT + + VIWVVVDRLT
Subjt:  DIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNVIWVVVDRLT

Query:  KMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDFAGCWDEHLP
        K AHF+PGK+TY   +W QLY+ EIVRLHGVPVSI+SDRD RFTS+FWK LQ ALGT+L FSTAFHPQTDGQTERLNQILEDMLRACVL+F+G WD HL 
Subjt:  KMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDFAGCWDEHLP

Query:  LIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDLEFEVGDHVFVKVAPMRGVTRF
        L+EFAYNNSYQATI MAPFEA+YG+ CR+PV W EVG Q++LGPELVQ TNAA+QKI+ R+LTAQSRQKSYAD+RR+DLEFEVGD VF+KVAPM+GV RF
Subjt:  LIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDLEFEVGDHVFVKVAPMRGVTRF

Query:  GKKGKLSPRFVGPFEILERVGAVAYKIALPPNLAAVHNVFHVSMLRKYTSDPTHVIEHETLPLREDLSYEVRPSKILARDTRRLRNKVIPLVKVAW
         KKGKLSPRFVGPFEILER+G VAY++ALPP+ AAVH+VFH+SMLRKY +DPTHV++ E L + E+LSYE +P ++LAR+ ++LR++ IPLVK+ W
Subjt:  GKKGKLSPRFVGPFEILERVGAVAYKIALPPNLAAVHNVFHVSMLRKYTSDPTHVIEHETLPLREDLSYEVRPSKILARDTRRLRNKVIPLVKVAW

A0A5D3CQB5 Reverse transcriptase

0.0e+00

75.56

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Query:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK
        M PAEL+ELK QLQ+LLDKGFIRPSVSPWGAPVLFVKKKDGS+RLCIDYRELNKVT+KN+YPLPRIDDLFDQL+GA+VFSKIDLRSGYHQLRIR+ DIPK
Subjt:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK

Query:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG
        TAFRSRYGHYEF+VMSFGLTNAPAVFM+LMNRVFKEFLD+FVIVFIDDIL+YSK+EAEHEEHL +VL  LR  +LYAKFSKCEFWL +V FLGHVVSS G
Subjt:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG

Query:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL
        ++VDPAKIEAV  W RP+TV+E+RSFLGLAGYYRRFV+DFS+I+S LTQLT+KG PF+W+ ACE+SFQELK++LV+APVLTVPDGSGN V+YSDAS KGL
Subjt:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL

Query:  GCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKIQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADA
        GCVLMQ+GKV+AYASRQLK +E+NYPTHDLELAAVVFALK WRHYLYGEKIQ++TDHKSLKY FTQKELNMRQRRWLELVKDYD EILYHPGKANVVADA
Subjt:  GCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKIQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADA

Query:  LSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLCVPRDKKILK
        LSRK  H++A+ITKQ  +  + +RA I V +   TAQ+ Q+T+QPTLR++II AQ  D +L +     E E+ EG+SISSD GL+++ RLCVP D  +  
Subjt:  LSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLCVPRDKKILK

Query:  DIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNVIWVVVDRLT
        +++TEAH + +T HPGSTKMYQDL+  YWW GMK+++A+FVSRCL CQQVKAPRQ PAGLLQPL VP WKWE+V MDFI+GLPKT + + VIWVVVDRLT
Subjt:  DIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNVIWVVVDRLT

Query:  KMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDFAGCWDEHLP
        K AHF+PGK+TY   +W QLY+ EIVRLHGVPVSI+SDRD RFTS+FWK LQ ALGT+L FSTAFHPQTDGQTERLNQILEDMLRACVL+F+G WD HL 
Subjt:  KMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDFAGCWDEHLP

Query:  LIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDLEFEVGDHVFVKVAPMRGVTRF
        L+EFAYNNSYQATI MAPFEA+YG+ CR+PV W EVG Q++LGPELVQ TNAA+QKI+ R+LTAQSRQKSYAD+RR+DLEFEVGD VF+KVAPM+GV RF
Subjt:  LIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDLEFEVGDHVFVKVAPMRGVTRF

Query:  GKKGKLSPRFVGPFEILERVGAVAYKIALPPNLAAVHNVFHVSMLRKYTSDPTHVIEHETLPLREDLSYEVRPSKILARDTRRLRNKVIPLVKVAW
         KKGKLSPRFVGPFEILER+G VAY++ALPP+ AAVH+VFH+SMLRKY +DPTHV++ E L + E+LSYE +P ++LAR+ ++LR++ IPLVK+ W
Subjt:  GKKGKLSPRFVGPFEILERVGAVAYKIALPPNLAAVHNVFHVSMLRKYTSDPTHVIEHETLPLREDLSYEVRPSKILARDTRRLRNKVIPLVKVAW

A0A6J1EV26 Reverse transcriptase

0.0e+00

82.33

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Query:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK
        M PAEL+ELK QLQ+LLDKGFIRPSVSPWGAPVLFVKKKDG++RLCIDYRELNKVTIKNKYPLPRIDDLFDQL+GA+VFSKIDLRSGYHQ+RIREEDIPK
Subjt:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK

Query:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG
        TAFRSRYGHYEF+VMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSE EHE HLR+VLT+LR  +LYAKFSKCEFWL EVAFLGHVVSS G
Subjt:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG

Query:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL
        +TVDPAKIEAV+KWPRPTTVTEVRSFLGLAGYYRRF++DFSK+S+ALTQLTKKGKPF+WT  CEQSF ELK+RLV+APVLTVPDGSG LVVYSDASGKGL
Subjt:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL

Query:  GCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKIQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADA
        GCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVV+ALKTWRHYLYGE++QV+TDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADA
Subjt:  GCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKIQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADA

Query:  LSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLCVPRDKKILK
        LSRK  HTSA+IT+Q+ +QDE++RAGI+V+ +G TAQ+ Q+++QPTL++RII+AQR+D HL ++W Q E ERP GYS+SS+GGL+W++RLCVPRD+KIL+
Subjt:  LSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLCVPRDKKILK

Query:  DIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNVIWVVVDRLT
        +IMTEAH+TSYTFHPGSTKMYQDLK  YWWPGMKK++AE+VSRCLTCQQVKAPRQRPAGLLQPL +PQWKWE + MDFI+GLPKT++ FNVIWV+VDRLT
Subjt:  DIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNVIWVVVDRLT

Query:  KMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDFAGCWDEHLP
        K+AHFIPG+ TYRVD+WA+LY++EI+RLHGVPV+IVSDRD +FTS FWK LQKALGTQL+F+TAFHPQTDGQTERLNQ LEDMLRACV+DFAGCWDEHL 
Subjt:  KMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDFAGCWDEHLP

Query:  LIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDLEFEVGDHVFVKVAPMRGVTRF
        L+EFAYNNSYQATIQMAPFEA+YGRRCRTP+FWEEVG +QLLGPELVQ TNAAVQKIKQRIL+AQSRQKSYAD RR+DLEF VGDHVF+KVAPMRGV+  
Subjt:  LIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDLEFEVGDHVFVKVAPMRGVTRF

Query:  GKKGKLSPRFVGPFEILERVGAVAYKIALPPN
         + G++   F     I E     AY+    PN
Subjt:  GKKGKLSPRFVGPFEILERVGAVAYKIALPPN

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

4.8e-144

33.04

Show/hide

Query:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK
        + P +++ + +++   L  G IR S +    PV+FV KK+G+LR+ +DY+ LNK    N YPLP I+ L  +++G+++F+K+DL+S YH +R+R+ D  K
Subjt:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK

Query:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG
         AFR   G +E+LVM +G++ APA F   +N +  E  ++ V+ ++DDIL++SKSE+EH +H++ VL  L+   L    +KCEF  S+V F+G+ +S  G
Subjt:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG

Query:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL
         T     I+ V++W +P    E+R FLG   Y R+F+   S+++  L  L KK   + WT    Q+ + +K+ LVS PVL   D S  +++ +DAS   +
Subjt:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL

Query:  GCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYG--EKIQVFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDIEILYHP
        G VL QK        + Y S ++ + + NY   D E+ A++ +LK WRHYL    E  ++ TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYG--EKIQVFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDIEILYHP

Query:  GKANVVADALSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLC
        G AN +ADALSR       ++ + E I  + +   I+ V         Q+++    + +++    +D  L  L N  +    E   +     +  K+++ 
Subjt:  GKANVVADALSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLC

Query:  VPRDKKILKDIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNV
        +P D ++ + I+ + H+     HPG   +   +   + W G++K+I E+V  C TCQ  K+   +P G LQP+   +  WE++ MDFI+ LP++   +N 
Subjt:  VPRDKKILKDIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNV

Query:  IWVVVDRLTKMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDF
        ++VVVDR +KMA  +P   +   ++ A+++ + ++   G P  I++D D  FTSQ WK         ++FS  + PQTDGQTER NQ +E +LR      
Subjt:  IWVVVDRLTKMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDF

Query:  AGCWDEHLPLIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDL-EFEVGDHVFVK
           W +H+ L++ +YNN+  +  QM PFE ++  R    +   E+ +      E  Q T    Q +K+ + T   + K Y D++ +++ EF+ GD V VK
Subjt:  AGCWDEHLPLIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDL-EFEVGDHVFVK

Query:  VAPMRGVTRF-GKKGKLSPRFVGPFEILERVGAVAYKIALPPNLAAV-HNVFHVSMLRKY---------TSDPT------HVIEHETLPLREDLSY
            R  T F  K  KL+P F GPF +L++ G   Y++ LP ++  +  + FHVS L KY         T D +      H++EH+    RE + Y
Subjt:  VAPMRGVTRF-GKKGKLSPRFVGPFEILERVGAVAYKIALPPNLAAV-HNVFHVSMLRKY---------TSDPT------HVIEHETLPLREDLSY

P0CT35 Transposon Tf2-2 polyprotein

4.8e-144

33.04

Show/hide

Query:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK
        + P +++ + +++   L  G IR S +    PV+FV KK+G+LR+ +DY+ LNK    N YPLP I+ L  +++G+++F+K+DL+S YH +R+R+ D  K
Subjt:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK

Query:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG
         AFR   G +E+LVM +G++ APA F   +N +  E  ++ V+ ++DDIL++SKSE+EH +H++ VL  L+   L    +KCEF  S+V F+G+ +S  G
Subjt:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG

Query:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL
         T     I+ V++W +P    E+R FLG   Y R+F+   S+++  L  L KK   + WT    Q+ + +K+ LVS PVL   D S  +++ +DAS   +
Subjt:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL

Query:  GCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYG--EKIQVFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDIEILYHP
        G VL QK        + Y S ++ + + NY   D E+ A++ +LK WRHYL    E  ++ TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYG--EKIQVFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDIEILYHP

Query:  GKANVVADALSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLC
        G AN +ADALSR       ++ + E I  + +   I+ V         Q+++    + +++    +D  L  L N  +    E   +     +  K+++ 
Subjt:  GKANVVADALSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLC

Query:  VPRDKKILKDIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNV
        +P D ++ + I+ + H+     HPG   +   +   + W G++K+I E+V  C TCQ  K+   +P G LQP+   +  WE++ MDFI+ LP++   +N 
Subjt:  VPRDKKILKDIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNV

Query:  IWVVVDRLTKMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDF
        ++VVVDR +KMA  +P   +   ++ A+++ + ++   G P  I++D D  FTSQ WK         ++FS  + PQTDGQTER NQ +E +LR      
Subjt:  IWVVVDRLTKMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDF

Query:  AGCWDEHLPLIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDL-EFEVGDHVFVK
           W +H+ L++ +YNN+  +  QM PFE ++  R    +   E+ +      E  Q T    Q +K+ + T   + K Y D++ +++ EF+ GD V VK
Subjt:  AGCWDEHLPLIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDL-EFEVGDHVFVK

Query:  VAPMRGVTRF-GKKGKLSPRFVGPFEILERVGAVAYKIALPPNLAAV-HNVFHVSMLRKY---------TSDPT------HVIEHETLPLREDLSY
            R  T F  K  KL+P F GPF +L++ G   Y++ LP ++  +  + FHVS L KY         T D +      H++EH+    RE + Y
Subjt:  VAPMRGVTRF-GKKGKLSPRFVGPFEILERVGAVAYKIALPPNLAAV-HNVFHVSMLRKY---------TSDPT------HVIEHETLPLREDLSY

P0CT36 Transposon Tf2-3 polyprotein

4.8e-144

33.04

Show/hide

Query:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK
        + P +++ + +++   L  G IR S +    PV+FV KK+G+LR+ +DY+ LNK    N YPLP I+ L  +++G+++F+K+DL+S YH +R+R+ D  K
Subjt:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK

Query:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG
         AFR   G +E+LVM +G++ APA F   +N +  E  ++ V+ ++DDIL++SKSE+EH +H++ VL  L+   L    +KCEF  S+V F+G+ +S  G
Subjt:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG

Query:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL
         T     I+ V++W +P    E+R FLG   Y R+F+   S+++  L  L KK   + WT    Q+ + +K+ LVS PVL   D S  +++ +DAS   +
Subjt:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL

Query:  GCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYG--EKIQVFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDIEILYHP
        G VL QK        + Y S ++ + + NY   D E+ A++ +LK WRHYL    E  ++ TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYG--EKIQVFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDIEILYHP

Query:  GKANVVADALSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLC
        G AN +ADALSR       ++ + E I  + +   I+ V         Q+++    + +++    +D  L  L N  +    E   +     +  K+++ 
Subjt:  GKANVVADALSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLC

Query:  VPRDKKILKDIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNV
        +P D ++ + I+ + H+     HPG   +   +   + W G++K+I E+V  C TCQ  K+   +P G LQP+   +  WE++ MDFI+ LP++   +N 
Subjt:  VPRDKKILKDIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNV

Query:  IWVVVDRLTKMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDF
        ++VVVDR +KMA  +P   +   ++ A+++ + ++   G P  I++D D  FTSQ WK         ++FS  + PQTDGQTER NQ +E +LR      
Subjt:  IWVVVDRLTKMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDF

Query:  AGCWDEHLPLIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDL-EFEVGDHVFVK
           W +H+ L++ +YNN+  +  QM PFE ++  R    +   E+ +      E  Q T    Q +K+ + T   + K Y D++ +++ EF+ GD V VK
Subjt:  AGCWDEHLPLIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDL-EFEVGDHVFVK

Query:  VAPMRGVTRF-GKKGKLSPRFVGPFEILERVGAVAYKIALPPNLAAV-HNVFHVSMLRKY---------TSDPT------HVIEHETLPLREDLSY
            R  T F  K  KL+P F GPF +L++ G   Y++ LP ++  +  + FHVS L KY         T D +      H++EH+    RE + Y
Subjt:  VAPMRGVTRF-GKKGKLSPRFVGPFEILERVGAVAYKIALPPNLAAV-HNVFHVSMLRKY---------TSDPT------HVIEHETLPLREDLSY

P0CT37 Transposon Tf2-4 polyprotein

4.8e-144

33.04

Show/hide

Query:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK
        + P +++ + +++   L  G IR S +    PV+FV KK+G+LR+ +DY+ LNK    N YPLP I+ L  +++G+++F+K+DL+S YH +R+R+ D  K
Subjt:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK

Query:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG
         AFR   G +E+LVM +G++ APA F   +N +  E  ++ V+ ++DDIL++SKSE+EH +H++ VL  L+   L    +KCEF  S+V F+G+ +S  G
Subjt:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG

Query:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL
         T     I+ V++W +P    E+R FLG   Y R+F+   S+++  L  L KK   + WT    Q+ + +K+ LVS PVL   D S  +++ +DAS   +
Subjt:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL

Query:  GCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYG--EKIQVFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDIEILYHP
        G VL QK        + Y S ++ + + NY   D E+ A++ +LK WRHYL    E  ++ TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYG--EKIQVFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDIEILYHP

Query:  GKANVVADALSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLC
        G AN +ADALSR       ++ + E I  + +   I+ V         Q+++    + +++    +D  L  L N  +    E   +     +  K+++ 
Subjt:  GKANVVADALSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLC

Query:  VPRDKKILKDIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNV
        +P D ++ + I+ + H+     HPG   +   +   + W G++K+I E+V  C TCQ  K+   +P G LQP+   +  WE++ MDFI+ LP++   +N 
Subjt:  VPRDKKILKDIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNV

Query:  IWVVVDRLTKMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDF
        ++VVVDR +KMA  +P   +   ++ A+++ + ++   G P  I++D D  FTSQ WK         ++FS  + PQTDGQTER NQ +E +LR      
Subjt:  IWVVVDRLTKMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDF

Query:  AGCWDEHLPLIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDL-EFEVGDHVFVK
           W +H+ L++ +YNN+  +  QM PFE ++  R    +   E+ +      E  Q T    Q +K+ + T   + K Y D++ +++ EF+ GD V VK
Subjt:  AGCWDEHLPLIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDL-EFEVGDHVFVK

Query:  VAPMRGVTRF-GKKGKLSPRFVGPFEILERVGAVAYKIALPPNLAAV-HNVFHVSMLRKY---------TSDPT------HVIEHETLPLREDLSY
            R  T F  K  KL+P F GPF +L++ G   Y++ LP ++  +  + FHVS L KY         T D +      H++EH+    RE + Y
Subjt:  VAPMRGVTRF-GKKGKLSPRFVGPFEILERVGAVAYKIALPPNLAAV-HNVFHVSMLRKY---------TSDPT------HVIEHETLPLREDLSY

P0CT41 Transposon Tf2-12 polyprotein

4.8e-144

33.04

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Query:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK
        + P +++ + +++   L  G IR S +    PV+FV KK+G+LR+ +DY+ LNK    N YPLP I+ L  +++G+++F+K+DL+S YH +R+R+ D  K
Subjt:  MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPK

Query:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG
         AFR   G +E+LVM +G++ APA F   +N +  E  ++ V+ ++DDIL++SKSE+EH +H++ VL  L+   L    +KCEF  S+V F+G+ +S  G
Subjt:  TAFRSRYGHYEFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSG

Query:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL
         T     I+ V++W +P    E+R FLG   Y R+F+   S+++  L  L KK   + WT    Q+ + +K+ LVS PVL   D S  +++ +DAS   +
Subjt:  ITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGL

Query:  GCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYG--EKIQVFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDIEILYHP
        G VL QK        + Y S ++ + + NY   D E+ A++ +LK WRHYL    E  ++ TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYG--EKIQVFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDIEILYHP

Query:  GKANVVADALSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLC
        G AN +ADALSR       ++ + E I  + +   I+ V         Q+++    + +++    +D  L  L N  +    E   +     +  K+++ 
Subjt:  GKANVVADALSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQMTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLC

Query:  VPRDKKILKDIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNV
        +P D ++ + I+ + H+     HPG   +   +   + W G++K+I E+V  C TCQ  K+   +P G LQP+   +  WE++ MDFI+ LP++   +N 
Subjt:  VPRDKKILKDIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQVKAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNV

Query:  IWVVVDRLTKMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDF
        ++VVVDR +KMA  +P   +   ++ A+++ + ++   G P  I++D D  FTSQ WK         ++FS  + PQTDGQTER NQ +E +LR      
Subjt:  IWVVVDRLTKMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLRFSTAFHPQTDGQTERLNQILEDMLRACVLDF

Query:  AGCWDEHLPLIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDL-EFEVGDHVFVK
           W +H+ L++ +YNN+  +  QM PFE ++  R    +   E+ +      E  Q T    Q +K+ + T   + K Y D++ +++ EF+ GD V VK
Subjt:  AGCWDEHLPLIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKSYADLRRRDL-EFEVGDHVFVK

Query:  VAPMRGVTRF-GKKGKLSPRFVGPFEILERVGAVAYKIALPPNLAAV-HNVFHVSMLRKY---------TSDPT------HVIEHETLPLREDLSY
            R  T F  K  KL+P F GPF +L++ G   Y++ LP ++  +  + FHVS L KY         T D +      H++EH+    RE + Y
Subjt:  VAPMRGVTRF-GKKGKLSPRFVGPFEILERVGAVAYKIALPPNLAAV-HNVFHVSMLRKY---------TSDPT------HVIEHETLPLREDLSY

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

4.6e-25

44.8

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Query:  HLRKVLTILRTQRLYAKFSKCEFWLSEVAFLG--HVVSSSGITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLW
        HL  VL I    + YA   KC F   ++A+LG  H++S  G++ DPAK+EA++ WP P   TE+R FLGL GYYRRFV+++ KI   LT+L KK     W
Subjt:  HLRKVLTILRTQRLYAKFSKCEFWLSEVAFLG--HVVSSSGITVDPAKIEAVMKWPRPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLW

Query:  TSACEQSFQELKERLVSAPVLTVPD
        T     +F+ LK  + + PVL +PD
Subjt:  TSACEQSFQELKERLVSAPVLTVPD

Sequences

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CDS sequence

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ATGACACCTGCAGAACTCAGGGAATTGAAGGAACAGTTACAGGACCTATTGGATAAGGGTTTCATACGACCCAGTGTGTCGCCCTGGGGAGCCCCTGTTCTGTTTGTCAA
GAAGAAAGATGGATCCCTGCGCCTGTGTATAGATTACAGAGAATTGAATAAGGTCACCATAAAGAATAAGTACCCCCTCCCGAGGATCGACGACTTGTTTGACCAGCTGC
GGGGAGCATCGGTATTCTCTAAAATTGACTTGAGGTCAGGATACCATCAATTGAGAATAAGAGAAGAAGATATTCCCAAAACAGCTTTTAGAAGTCGCTATGGACATTAT
GAATTTCTCGTCATGTCCTTTGGACTTACCAATGCACCAGCCGTCTTCATGGAATTAATGAACAGAGTGTTTAAAGAATTCTTAGACACTTTTGTTATAGTGTTTATTGA
TGATATCCTGGTGTACTCCAAATCAGAGGCAGAGCACGAAGAACATTTGAGAAAAGTTCTGACCATACTAAGAACACAGCGACTGTACGCCAAGTTTTCCAAGTGTGAAT
TTTGGCTGTCTGAGGTAGCGTTTTTGGGTCATGTGGTGTCGAGTAGTGGAATCACAGTAGACCCAGCTAAAATTGAGGCAGTGATGAAGTGGCCAAGACCGACCACAGTC
ACTGAGGTACGGAGTTTTCTGGGACTAGCTGGTTACTACAGAAGGTTCGTCCAGGATTTCTCCAAGATATCTTCAGCACTGACTCAGTTAACTAAGAAAGGCAAGCCTTT
TTTGTGGACATCAGCCTGCGAACAGAGCTTCCAGGAACTCAAGGAGAGGTTAGTGTCAGCTCCAGTCCTCACAGTTCCTGATGGATCAGGAAATCTTGTGGTGTACAGCG
ACGCATCGGGAAAAGGTCTTGGATGCGTGCTCATGCAGAAGGGTAAAGTGATAGCTTATGCTTCCAGACAACTGAAGGAATATGAAAGGAATTATCCTACTCATGACCTC
GAGTTAGCAGCAGTGGTGTTTGCACTAAAGACGTGGCGACATTATCTGTATGGAGAGAAAATTCAAGTATTCACCGATCACAAAAGTCTCAAGTACCTATTTACGCAAAA
GGAACTTAACATGAGGCAGAGGAGATGGTTGGAATTAGTAAAAGATTACGATATCGAGATCCTGTATCATCCAGGCAAGGCCAATGTTGTGGCGGACGCATTGAGCAGAA
AGGCAGTTCATACTTCCGCTATGATCACTAAGCAGGAGAGAATACAGGATGAGATGAAGAGGGCTGGAATCGATGTTGTAATCAAAGGTGGTACTGCTCAGATAACACAA
ATGACCATGCAACCTACCTTACGAAAACGGATTATTGACGCTCAGAGGTCTGACGAACACCTTGAAAAGCTGTGGAATCAGACGGAGATTGAAAGACCAGAGGGGTACTC
AATCTCTTCAGATGGGGGTCTGCTGTGGAAAAATCGCTTATGTGTTCCCCGTGACAAGAAAATTCTTAAGGATATTATGACAGAAGCTCACGATACTTCTTATACGTTCC
ACCCTGGAAGTACAAAGATGTATCAGGATCTTAAGGGATGTTATTGGTGGCCAGGGATGAAAAAGGAGATAGCAGAATTTGTAAGCCGATGCTTGACTTGTCAGCAGGTG
AAGGCCCCGAGACAGCGTCCAGCAGGACTGCTACAACCCCTAAAGGTCCCGCAATGGAAATGGGAGGCAGTTTGCATGGATTTTATCTCAGGCTTGCCCAAGACTAAGCA
GAACTTCAACGTAATCTGGGTAGTTGTTGATAGACTTACCAAAATGGCTCACTTCATCCCAGGCAAAACCACTTATCGTGTGGATCGGTGGGCTCAGCTGTATATCAGAG
AAATAGTACGCTTGCATGGTGTACCGGTGTCTATAGTGTCTGATCGGGACACTAGATTCACCTCTCAGTTTTGGAAAAGCCTCCAAAAAGCATTGGGGACTCAGTTAAGG
TTTAGTACAGCATTCCATCCTCAGACGGACGGACAGACTGAAAGATTGAATCAAATTTTGGAAGATATGTTGCGAGCTTGTGTCTTGGATTTCGCTGGGTGCTGGGATGA
ACACCTACCTCTGATAGAGTTTGCTTATAATAATAGCTATCAAGCGACCATCCAGATGGCCCCTTTTGAGGCGATGTATGGGCGTAGGTGTCGAACACCAGTATTTTGGG
AAGAAGTAGGCACGCAGCAGCTACTGGGACCGGAGTTAGTTCAGGTCACCAACGCGGCAGTGCAGAAAATTAAGCAAAGAATCCTCACTGCACAAAGCCGACAGAAGAGC
TATGCAGATTTGCGTAGAAGGGACCTCGAGTTCGAGGTGGGTGACCATGTGTTCGTGAAGGTAGCCCCTATGAGAGGGGTGACGAGGTTTGGAAAGAAAGGGAAGTTAAG
CCCAAGGTTTGTAGGCCCTTTCGAGATTCTAGAGAGAGTTGGGGCCGTGGCGTATAAGATTGCTCTACCACCAAACCTTGCCGCCGTTCACAACGTGTTCCACGTATCTA
TGCTGCGAAAGTACACCTCAGACCCTACTCACGTGATTGAACACGAAACCCTCCCTCTTCGGGAAGATTTGTCCTACGAGGTAAGACCCAGCAAAATTCTGGCTCGAGAC
ACTAGGCGTCTGCGCAACAAAGTTATTCCCTTGGTAAAAGTCGCATGGGTCGCGGGTCGCGGGTTCGGGTCGGAAGCGGTGATTCGGGTGGACCGCGGGTCGTCGGCTTG
GTTCGGTTCGCCGTGCGGGTATCGGGTTAACCAAGGAGCACGGGTCGGGTCGCGGAGCCAGGGACGCGTGTCGCAGGAGAGCTGGAGCTGCGTTTTCCCAGGCGACGCTC
GACGCGTGTCCGGAGTCTCTCAGATCTCGTCGTTTCGTCCGTTTCCCTCACCAAGATCGGTAGCGAATCCTCCCTGGACAAAGGAGGAGGAAATCTCCACACGAGTTCTT
ACTTCACTCCAAGAAGGGCTCCAGAGTACAGGTCTTGGTAGGAAATGGATTCCGTCGGCGACTCTCCGACGAAAAACTCCGGCAAACCAGTTTTCTCTCTCAAACTTTCT
CTCAGTTCTTCTCTCTCACTCTTCTTCTTTTGCAGTCGCGGGTCGCGGGTTCGGGTCGGAAGCGGTGATTCGGGTGGACCGCGGGTCGTCGGCTTGGTTCGGTTCGCCGT
GCGGGTATCGGGTTAACCAAGGAGCACGGGTCGGGTCGCGGAGCCAGGGACGCGTGTCGCAGGAGAGCTGGAGCTGCGTTTTCCCAGGCGACGCTCGACGCGTGTCCGGA
GGTGATTGGCGCTCGCGGTCCTCTAGTTGGTTGACACGTGGCACGCCGGCGGCTTCTCTCTCCTCCTACCAGAAAATCAAGGCTTCCGATTAG

mRNA sequence

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Protein sequence

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MTPAELRELKEQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNKYPLPRIDDLFDQLRGASVFSKIDLRSGYHQLRIREEDIPKTAFRSRYGHY
EFLVMSFGLTNAPAVFMELMNRVFKEFLDTFVIVFIDDILVYSKSEAEHEEHLRKVLTILRTQRLYAKFSKCEFWLSEVAFLGHVVSSSGITVDPAKIEAVMKWPRPTTV
TEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFLWTSACEQSFQELKERLVSAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDL
ELAAVVFALKTWRHYLYGEKIQVFTDHKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADALSRKAVHTSAMITKQERIQDEMKRAGIDVVIKGGTAQITQ
MTMQPTLRKRIIDAQRSDEHLEKLWNQTEIERPEGYSISSDGGLLWKNRLCVPRDKKILKDIMTEAHDTSYTFHPGSTKMYQDLKGCYWWPGMKKEIAEFVSRCLTCQQV
KAPRQRPAGLLQPLKVPQWKWEAVCMDFISGLPKTKQNFNVIWVVVDRLTKMAHFIPGKTTYRVDRWAQLYIREIVRLHGVPVSIVSDRDTRFTSQFWKSLQKALGTQLR
FSTAFHPQTDGQTERLNQILEDMLRACVLDFAGCWDEHLPLIEFAYNNSYQATIQMAPFEAMYGRRCRTPVFWEEVGTQQLLGPELVQVTNAAVQKIKQRILTAQSRQKS
YADLRRRDLEFEVGDHVFVKVAPMRGVTRFGKKGKLSPRFVGPFEILERVGAVAYKIALPPNLAAVHNVFHVSMLRKYTSDPTHVIEHETLPLREDLSYEVRPSKILARD
TRRLRNKVIPLVKVAWVAGRGFGSEAVIRVDRGSSAWFGSPCGYRVNQGARVGSRSQGRVSQESWSCVFPGDARRVSGVSQISSFRPFPSPRSVANPPWTKEEEISTRVL
TSLQEGLQSTGLGRKWIPSATLRRKTPANQFSLSNFLSVLLSHSSSFAVAGRGFGSEAVIRVDRGSSAWFGSPCGYRVNQGARVGSRSQGRVSQESWSCVFPGDARRVSG
GDWRSRSSSWLTRGTPAASLSSYQKIKASD

CmoCh17G003970 (gene) of Cucurbita moschata (Rifu) v1 genome