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CmoCh17G004510 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G004510
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAutophagy-related protein
Genome locationCmo_Chr17:3081456..3086506
RNA-Seq ExpressionCmoCh17G004510
SyntenyCmoCh17G004510
Gene Ontology termsGO:0006914 - autophagy (biological process)
GO:0006995 - cellular response to nitrogen starvation (biological process)
GO:0005874 - microtubule (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR004241 - Autophagy protein Atg8 ubiquitin-like
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575217.1 Autophagy-related protein 8f, partial [Cucurbita argyrosperma subsp. sororia]2.2e-5495.83Show/hide
Query:  SFPAGDYQFFVTIMSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPP
        S PA    FFVTIMSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPP
Subjt:  SFPAGDYQFFVTIMSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPP

Query:  TGSLMSAIYDERKDEDGFLY
        TGSLMSAIYDERKDEDGFLY
Subjt:  TGSLMSAIYDERKDEDGFLY

XP_008458134.1 PREDICTED: autophagy-related protein 8f [Cucumis melo]1.7e-51100Show/hide
Query:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK
        MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK
Subjt:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK

Query:  DEDGFLY
        DEDGFLY
Subjt:  DEDGFLY

XP_011656871.1 autophagy-related protein 8f [Cucumis sativus]5.0e-5199.07Show/hide
Query:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK
        MSTSSFKQEH+FEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK
Subjt:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK

Query:  DEDGFLY
        DEDGFLY
Subjt:  DEDGFLY

XP_022147206.1 autophagy-related protein 8f-like [Momordica charantia]8.5e-5198.13Show/hide
Query:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK
        MSTSSFKQEHDFEKRHAEA+RIREKYPDRIPVIVEKAERSDIPNIDKKKYLVP+DLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK
Subjt:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK

Query:  DEDGFLY
        DEDGFLY
Subjt:  DEDGFLY

XP_042504730.1 autophagy-related protein 8f-like isoform X2 [Macadamia integrifolia]6.7e-4893.46Show/hide
Query:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK
        M+ S FKQEHDFEKR AEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTG++MSAIYDE+K
Subjt:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK

Query:  DEDGFLY
        DEDGFLY
Subjt:  DEDGFLY

TrEMBL top hitse value%identityAlignment
A0A0A0KFQ8 Autophagy-related protein2.4e-5199.07Show/hide
Query:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK
        MSTSSFKQEH+FEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK
Subjt:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK

Query:  DEDGFLY
        DEDGFLY
Subjt:  DEDGFLY

A0A1S3C739 Autophagy-related protein8.3e-52100Show/hide
Query:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK
        MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK
Subjt:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK

Query:  DEDGFLY
        DEDGFLY
Subjt:  DEDGFLY

A0A5D3CUD2 Autophagy-related protein8.3e-52100Show/hide
Query:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK
        MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK
Subjt:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK

Query:  DEDGFLY
        DEDGFLY
Subjt:  DEDGFLY

A0A6J1H5U6 Autophagy-related protein8.3e-52100Show/hide
Query:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK
        MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK
Subjt:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK

Query:  DEDGFLY
        DEDGFLY
Subjt:  DEDGFLY

A0A6J1L5L8 Autophagy-related protein8.3e-52100Show/hide
Query:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK
        MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK
Subjt:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK

Query:  DEDGFLY
        DEDGFLY
Subjt:  DEDGFLY

SwissProt top hitse value%identityAlignment
A2YS06 Autophagy-related protein 8C5.5e-4585.05Show/hide
Query:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK
        M+ SSFK EH  E+R AEA RIREKYPDRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQFVYV+RKRIKLSAEKAIFIFV N LPPT +LMSAIY+E K
Subjt:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK

Query:  DEDGFLY
        DEDGFLY
Subjt:  DEDGFLY

M1C146 Autophagy-related protein 8C-like8.5e-4685.05Show/hide
Query:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK
        M+ SSFK EH  E+R AEAARIREKYPDRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQFVYV+RKRIKLSAEKAIFIFV N+LPPT ++MSAIY+E K
Subjt:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK

Query:  DEDGFLY
        DEDGFLY
Subjt:  DEDGFLY

Q8S926 Autophagy-related protein 8e1.9e-4584.62Show/hide
Query:  SSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDED
        S FK ++DFEKR AEA RIREKYPDRIPVIVEKAE+S++PNIDKKKYLVP+DLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTG LMS++Y+++KDED
Subjt:  SSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDED

Query:  GFLY
        GFLY
Subjt:  GFLY

Q8VYK7 Autophagy-related protein 8f4.1e-4887.85Show/hide
Query:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK
        M+ SSFKQEHD EKR AEAARIREKYPDRIPVIVEKAE+SDIP IDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPP G+LMS++Y+E+K
Subjt:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK

Query:  DEDGFLY
        D+DGFLY
Subjt:  DEDGFLY

Q9LZZ9 Autophagy-related protein 8g1.7e-4685.05Show/hide
Query:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK
        MS  SF+Q+HDFEKR AEA RIREKY DR+PVIVEK+E+SDIPNIDKKKYLVPADLTVGQFVYVIRKRI+LSAEKAIFIFVDNVLPPTG++MS IYDE K
Subjt:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK

Query:  DEDGFLY
        +EDGFLY
Subjt:  DEDGFLY

Arabidopsis top hitse value%identityAlignment
AT2G45170.1 AUTOPHAGY 8E1.4e-4684.62Show/hide
Query:  SSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDED
        S FK ++DFEKR AEA RIREKYPDRIPVIVEKAE+S++PNIDKKKYLVP+DLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTG LMS++Y+++KDED
Subjt:  SSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDED

Query:  GFLY
        GFLY
Subjt:  GFLY

AT2G45170.2 AUTOPHAGY 8E1.4e-4684.62Show/hide
Query:  SSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDED
        S FK ++DFEKR AEA RIREKYPDRIPVIVEKAE+S++PNIDKKKYLVP+DLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTG LMS++Y+++KDED
Subjt:  SSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDED

Query:  GFLY
        GFLY
Subjt:  GFLY

AT3G60640.1 Ubiquitin-like superfamily protein1.2e-4785.05Show/hide
Query:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK
        MS  SF+Q+HDFEKR AEA RIREKY DR+PVIVEK+E+SDIPNIDKKKYLVPADLTVGQFVYVIRKRI+LSAEKAIFIFVDNVLPPTG++MS IYDE K
Subjt:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK

Query:  DEDGFLY
        +EDGFLY
Subjt:  DEDGFLY

AT4G16520.1 Ubiquitin-like superfamily protein2.9e-4987.85Show/hide
Query:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK
        M+ SSFKQEHD EKR AEAARIREKYPDRIPVIVEKAE+SDIP IDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPP G+LMS++Y+E+K
Subjt:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK

Query:  DEDGFLY
        D+DGFLY
Subjt:  DEDGFLY

AT4G16520.2 Ubiquitin-like superfamily protein2.9e-4987.85Show/hide
Query:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK
        M+ SSFKQEHD EKR AEAARIREKYPDRIPVIVEKAE+SDIP IDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPP G+LMS++Y+E+K
Subjt:  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERK

Query:  DEDGFLY
        D+DGFLY
Subjt:  DEDGFLY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCATTTTCATTTCAGCCAAGAAATCGAACGAAACTTCAGTTTTGGTCTCCTCCTTCCCTGCCGGCGACTATCAGTTTTTCGTGACTATAATGTCGACGAGCTCGTT
CAAGCAAGAGCATGATTTTGAAAAGAGACACGCTGAGGCTGCTCGGATTAGAGAGAAGTACCCAGACAGAATTCCAGTAATTGTGGAGAAGGCAGAGAGAAGTGATATTC
CCAACATTGACAAAAAAAAGTATTTAGTGCCTGCTGACCTGACTGTTGGTCAATTCGTTTATGTTATCCGGAAGAGAATAAAACTGAGTGCAGAAAAAGCAATTTTCATA
TTCGTGGACAATGTGCTACCGCCAACAGGGTCTCTCATGTCTGCAATCTACGATGAGAGGAAGGATGAGGATGGCTTTCTCTATTGCTGTGTATATATGTATATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCATTTTCATTTCAGCCAAGAAATCGAACGAAACTTCAGTTTTGGTCTCCTCCTTCCCTGCCGGCGACTATCAGTTTTTCGTGACTATAATGTCGACGAGCTCGTT
CAAGCAAGAGCATGATTTTGAAAAGAGACACGCTGAGGCTGCTCGGATTAGAGAGAAGTACCCAGACAGAATTCCAGTAATTGTGGAGAAGGCAGAGAGAAGTGATATTC
CCAACATTGACAAAAAAAAGTATTTAGTGCCTGCTGACCTGACTGTTGGTCAATTCGTTTATGTTATCCGGAAGAGAATAAAACTGAGTGCAGAAAAAGCAATTTTCATA
TTCGTGGACAATGTGCTACCGCCAACAGGGTCTCTCATGTCTGCAATCTACGATGAGAGGAAGGATGAGGATGGCTTTCTCTATTGCTGTGTATATATGTATATTTAA
Protein sequenceShow/hide protein sequence
MGIFISAKKSNETSVLVSSFPAGDYQFFVTIMSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFI
FVDNVLPPTGSLMSAIYDERKDEDGFLYCCVYMYI