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CmoCh17G004630 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G004630
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionStimulator of interferon protein
Genome locationCmo_Chr17:3270104..3271612
RNA-Seq ExpressionCmoCh17G004630
SyntenyCmoCh17G004630
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575224.1 hypothetical protein SDJN03_25863, partial [Cucurbita argyrosperma subsp. sororia]2.1e-6997.71Show/hide
Query:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPPTATEPAGIMSRSVYSGDKIKHHHEDSAA
        MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPP TATE AGI+SRSVYSGDKIKHHHEDSAA
Subjt:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPPTATEPAGIMSRSVYSGDKIKHHHEDSAA

Query:  TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
        TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
Subjt:  TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC

XP_022959271.1 uncharacterized protein LOC111460301 [Cucurbita moschata]1.3e-71100Show/hide
Query:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPPTATEPAGIMSRSVYSGDKIKHHHEDSAA
        MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPPTATEPAGIMSRSVYSGDKIKHHHEDSAA
Subjt:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPPTATEPAGIMSRSVYSGDKIKHHHEDSAA

Query:  TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
        TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
Subjt:  TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC

XP_023006670.1 uncharacterized protein LOC111499326 [Cucurbita maxima]1.4e-6895.42Show/hide
Query:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPPTATEPAGIMSRSVYSGDKIKHHHEDSAA
        MVDLQIVCCLCGDVGFPDKLFRC+KCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPPTATE AGIMSRSVYSGDKIKHHHED+AA
Subjt:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPPTATEPAGIMSRSVYSGDKIKHHHEDSAA

Query:  TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
         VDKGKQGGAGS  SPRPTTRRYKLLKDVMC
Subjt:  TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC

XP_023548605.1 uncharacterized protein LOC111807219 [Cucurbita pepo subsp. pepo]3.1e-6896.21Show/hide
Query:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPPTATEPAGIMSRSVYSGDKIKHHHED-SA
        MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPPTAT+PAGIMSRSVYSGDKIKHHHED +A
Subjt:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPPTATEPAGIMSRSVYSGDKIKHHHED-SA

Query:  ATVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
        ATVDKGKQG AGSV SPRPTTRRYKLLKDVMC
Subjt:  ATVDKGKQGGAGSVASPRPTTRRYKLLKDVMC

XP_038875571.1 uncharacterized protein LOC120067983 [Benincasa hispida]9.7e-6284.73Show/hide
Query:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPPTATEPAGIMSRSVYSGDKIKHHHEDSAA
        MVDLQIVCC+CGD+GFPDKLFRC KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGR+SSRSHG+SSRRPP T T  AG+MSRS YSG+KIKHHH+DSA 
Subjt:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPPTATEPAGIMSRSVYSGDKIKHHHEDSAA

Query:  TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
        T++KGK GGAGS  SPRPTTRRYKLLKDVMC
Subjt:  TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC

TrEMBL top hitse value%identityAlignment
A0A0A0KFQ0 Uncharacterized protein5.9e-5781.82Show/hide
Query:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPPTATEPAGIMSRSVYSGDK-IKHHHEDSA
        MVDLQIVCC+CGD+GFPDKLF C KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRS+SRSHG+SSRRPP T T   GIM+RS YSGDK IKHHH DS 
Subjt:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPPTATEPAGIMSRSVYSGDK-IKHHHEDSA

Query:  ATVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
           +KGK GGAGS +SPRPTTRRYKLLKDVMC
Subjt:  ATVDKGKQGGAGSVASPRPTTRRYKLLKDVMC

A0A1S3CSH8 uncharacterized protein LOC1035044133.6e-5481.34Show/hide
Query:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRS-SSRSHG-TSSRRPPPTATEPAGIMSRSVYSGDK-IKHHHED
        MVDLQIVCC+CGD+GFPDKLF C KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRS SSRSHG +SSRRPP T T   GIMSRS YS DK IKHHH+D
Subjt:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRS-SSRSHG-TSSRRPPPTATEPAGIMSRSVYSGDK-IKHHHED

Query:  SAATVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
        S    +KGK GGAGS  SPRPTTRRYKLLKDVMC
Subjt:  SAATVDKGKQGGAGSVASPRPTTRRYKLLKDVMC

A0A6J1E160 uncharacterized protein LOC1110249973.4e-5277.61Show/hide
Query:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRR---PPPTATEPAGIMSRSVYSGDKIKHHHED
        MVDLQIVCC+CGD+GFPDKLFRC KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHG+SS++   PPP A   AGIM+RS Y+  KIK H ED
Subjt:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRR---PPPTATEPAGIMSRSVYSGDKIKHHHED

Query:  SAATVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
          A  DKGK  G G V SPRPTTRRYKLLKDVMC
Subjt:  SAATVDKGKQGGAGSVASPRPTTRRYKLLKDVMC

A0A6J1H4E1 uncharacterized protein LOC1114603016.5e-72100Show/hide
Query:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPPTATEPAGIMSRSVYSGDKIKHHHEDSAA
        MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPPTATEPAGIMSRSVYSGDKIKHHHEDSAA
Subjt:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPPTATEPAGIMSRSVYSGDKIKHHHEDSAA

Query:  TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
        TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
Subjt:  TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC

A0A6J1L0S8 uncharacterized protein LOC1114993266.7e-6995.42Show/hide
Query:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPPTATEPAGIMSRSVYSGDKIKHHHEDSAA
        MVDLQIVCCLCGDVGFPDKLFRC+KCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPPTATE AGIMSRSVYSGDKIKHHHED+AA
Subjt:  MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPPTATEPAGIMSRSVYSGDKIKHHHEDSAA

Query:  TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
         VDKGKQGGAGS  SPRPTTRRYKLLKDVMC
Subjt:  TVDKGKQGGAGSVASPRPTTRRYKLLKDVMC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02070.1 unknown protein6.5e-3252.27Show/hide
Query:  LQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSS---RSHGTSSRRPPPTATEPAGIMSRSVYS-GDKIKHHHEDSA
        ++ VCC+CGDVGF DKLF C  C  RFQHSYCSNYY + AEP E+CDWC+ + R  S   R  G+SS++P  +        +RS YS G +IKH++ +  
Subjt:  LQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSS---RSHGTSSRRPPPTATEPAGIMSRSVYS-GDKIKHHHEDSA

Query:  ATVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
          V KG  G  G V SP+  TRRYKLLKDVMC
Subjt:  ATVDKGKQGGAGSVASPRPTTRRYKLLKDVMC

AT3G60520.1 unknown protein1.9e-3149.29Show/hide
Query:  MVDLQ-IVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRS-SSRSHGTSSRRPPPTATEPAGIMSRSVYSGDKIKHH----
        MVDL+  VCC+CGDVGF DKLF C KC NRFQHSYCS+YY E A+PI++CDWCQCE +S +   HG +            G   RS  S     HH    
Subjt:  MVDLQ-IVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRS-SSRSHGTSSRRPPPTATEPAGIMSRSVYSGDKIKHH----

Query:  ---HEDSAATVDKGKQGGAGSVASPRPTTRRYKLLKDVMC
           ++ +++++      G   V SPRP TRRYKLLKDVMC
Subjt:  ---HEDSAATVDKGKQGGAGSVASPRPTTRRYKLLKDVMC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGATCTTCAGATCGTTTGCTGCTTGTGCGGCGACGTCGGCTTCCCTGACAAGCTCTTCCGCTGTATCAAGTGCTCCAACCGCTTCCAACACTCGTACTGCAGCAA
CTACTACAGCGAATCGGCGGAGCCAATTGAGGTGTGTGATTGGTGCCAGTGTGAAGGCCGGAGCTCCTCCAGATCACACGGAACCTCCTCCAGAAGACCGCCACCGACCG
CTACCGAACCCGCCGGAATCATGAGCCGCTCCGTTTACTCCGGCGACAAAATCAAACACCATCATGAAGATTCCGCCGCCACCGTCGACAAGGGCAAACAAGGCGGCGCC
GGCAGCGTCGCATCGCCGAGGCCCACCACGCGGAGGTATAAGCTTCTCAAGGACGTAATGTGCTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAGGTTAAATTATGGTTAAAAACGGATTTATACACCGACTTGAAAACAGCACCGGTTTTGTTTTATATTTAAGTCATTCTCTTTGTTTTGTCTCTCATCATC
TTCATCTTCTTCATCTTGGTTGTTCTGGTGTTGTTTGTTGTTGGATATAAATTTCAGAATGGTGGATCTTCAGATCGTTTGCTGCTTGTGCGGCGACGTCGGCTTCCCTG
ACAAGCTCTTCCGCTGTATCAAGTGCTCCAACCGCTTCCAACACTCGTACTGCAGCAACTACTACAGCGAATCGGCGGAGCCAATTGAGGTGTGTGATTGGTGCCAGTGT
GAAGGCCGGAGCTCCTCCAGATCACACGGAACCTCCTCCAGAAGACCGCCACCGACCGCTACCGAACCCGCCGGAATCATGAGCCGCTCCGTTTACTCCGGCGACAAAAT
CAAACACCATCATGAAGATTCCGCCGCCACCGTCGACAAGGGCAAACAAGGCGGCGCCGGCAGCGTCGCATCGCCGAGGCCCACCACGCGGAGGTATAAGCTTCTCAAGG
ACGTAATGTGCTGATAAAACGCAGCGTTTCGATATGCCCGAACAGGGTTGGTTTTATTTTCTCTTTTTTTTTCTCAAATGTTAATTATTAATAAAATAATAATAATATTA
TTATTATGTAAG
Protein sequenceShow/hide protein sequence
MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPPTATEPAGIMSRSVYSGDKIKHHHEDSAATVDKGKQGGA
GSVASPRPTTRRYKLLKDVMC