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CmoCh17G004680 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G004680
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionMajor centromere autoantigen B
Genome locationCmo_Chr17:3326849..3328339
RNA-Seq ExpressionCmoCh17G004680
SyntenyCmoCh17G004680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GCB78861.1 hypothetical protein [Scyliorhinus torazame]3.2e-0434.09Show/hide
Query:  AAVEAPNIDDPGLAVGAEVP-NNGALEVVAAEDTPPNKDGAEVPADGAAPKKGEDELPADGAAPNEGKGELPEDGADPNKGATELPEPGAAPNEGTGELP
        AA+E+ ++      V  E P +   +    A D  P+    E P  G AP    +E P  G AP+    E+PE G  P+    E+P+ G AP+  T E+P
Subjt:  AAVEAPNIDDPGLAVGAEVP-NNGALEVVAAEDTPPNKDGAEVPADGAAPKKGEDELPADGAAPNEGKGELPEDGADPNKGATELPEPGAAPNEGTGELP

Query:  DDGADPNKGANEVPEAEAAPNEGTGELPEVGAAPNEGADEPPDEDETPNPKELNPPEDEEAANNEEPELPE--EAP
        + G  P+    EVPEA  AP+  T ++P+ G AP++  +E P+  E P+      PE  EA +    E+PE  EAP
Subjt:  DDGADPNKGANEVPEAEAAPNEGTGELPEVGAAPNEGADEPPDEDETPNPKELNPPEDEEAANNEEPELPE--EAP

KAA0039742.1 hypothetical protein E6C27_scaffold122G00020 [Cucumis melo var. makuwa]2.3e-6354.85Show/hide
Query:  ILVVLDKEVVENENPEEEAANGEDELKFWEELEEKEFWNGVVDADDEDDPNKFEVDT-----EEDEAKGLD---------------PNREELEPEAAVEA
        +LVVLDK +V NENPE EAANGEDE+KFWEELEE+E WNG +   D+DD NKFEV+T     EED  KGLD               PNRE  EPEA  EA
Subjt:  ILVVLDKEVVENENPEEEAANGEDELKFWEELEEKEFWNGVVDADDEDDPNKFEVDT-----EEDEAKGLD---------------PNREELEPEAAVEA

Query:  PNIDDPGLAVGAEVPNNGALEVVAAEDTPPNKDGA-EVPADGAAPKKGEDELPADGAAPNEGKGELPEDGADPNKGATELPEPGAAPNEGTGELPDDGAD
        PN  DP LA  A VPNNGALEVV AED PPNKDGA + PADGAAP KG DE+PA             E+   P +GATELPE GAAPN+G GELP     
Subjt:  PNIDDPGLAVGAEVPNNGALEVVAAEDTPPNKDGA-EVPADGAAPKKGEDELPADGAAPNEGKGELPEDGADPNKGATELPEPGAAPNEGTGELPDDGAD

Query:  PNKGANEVPEAEAAPNEGTGELPEVGAAPNEGADEPPDEDETPNPKELNPPEDEEAANNEEPE-------LPEEAPVEAAGREKEKGEEAEEGKEEEAKP
        PNK A+EVPE E              AAPN+GA+E  DEDE PNPKELNP EDEE  N +E E       L E+APVEA  REKEKGEE EE KEEE KP
Subjt:  PNKGANEVPEAEAAPNEGTGELPEVGAAPNEGADEPPDEDETPNPKELNPPEDEEAANNEEPE-------LPEEAPVEAAGREKEKGEEAEEGKEEEAKP

Query:  K-GVEEGGLEA-------------------------------EVDPKEKPVVDENGEEEEE
        K   EEGGLE                                 VDPKEKPVV+ENGEEEE+
Subjt:  K-GVEEGGLEA-------------------------------EVDPKEKPVVDENGEEEEE

KAF3440061.1 hypothetical protein FNV43_RR18339 [Rhamnella rubrinervis]1.4e-0431.88Show/hide
Query:  EAAVLVTPKPVNELAAPEEVVE---------------------GTE-DAAMDKLEELVEA------------------------DVREEEEDAAVILVVL
        EA VLVTPKPVN+   P+E  E                     GTE +  +  LE +VEA                        DV EE+E+ AV++ V 
Subjt:  EAAVLVTPKPVNELAAPEEVVE---------------------GTE-DAAMDKLEELVEA------------------------DVREEEEDAAVILVVL

Query:  D------KEVVENENPEEEAANGEDELKFWEELEEKEFWNGVVDADDEDDPNKFEVDTEEDEAKGL-----DPNREELEPEAAVEAPNIDDPGLAVGAEV
                E+VENE PEE+   GE E+KF  E        G V+A DE++PNK      E+ A+G+     DP+R +    A  +AP++D P  A   +V
Subjt:  D------KEVVENENPEEEAANGEDELKFWEELEEKEFWNGVVDADDEDDPNKFEVDTEEDEAKGL-----DPNREELEPEAAVEAPNIDDPGLAVGAEV

Query:  PNNGALEVVAAEDTPPNKDGAEVPADGAAPKKGEDELPADGAAPNEGKGELPEDGADPNKGATELPEPGAAPNEG--------TGELPDDGA--DPNKGA
         N   + + A +D P N D   + A+  APK+G  EL     APN  + EL     DPN    E P     PNEG        T E P+     DPN   
Subjt:  PNNGALEVVAAEDTPPNKDGAEVPADGAAPKKGEDELPADGAAPNEGKGELPEDGADPNKGATELPEPGAAPNEG--------TGELPDDGA--DPNKGA

Query:  NEVPEAEAAPNEGTGELPEVGAAPNEGADEPPDEDE---TPNPKELNPPEDEEAANNEEPEL-----PEEAPVEAAGREKEKGEEAEEGKEEEAKPKGVE
        N+ P  E APNEG  E       P     E P+ DE    PN   L    +E+  N EEPE      P     E A  +       ++    + +P+ V 
Subjt:  NEVPEAEAAPNEGTGELPEVGAAPNEGADEPPDEDE---TPNPKELNPPEDEEAANNEEPEL-----PEEAPVEAAGREKEKGEEAEEGKEEEAKPKGVE

Query:  EGGLEAEVDPKEKPVVDENGEEEEEAWEEEEPNEKP
        +    AE +P  +  V   G  E  A +EEEPN  P
Subjt:  EGGLEAEVDPKEKPVVDENGEEEEEAWEEEEPNEKP

TrEMBL top hitse value%identityAlignment
A0A3P8WDJ8 Si:ch211-194b1.14.4e-0431.18Show/hide
Query:  LVTP-KPVNELAAP----EEVVEGTEDAAMDKLEELVEADVREEEEDAAVILVVLDKEVVENENPEEEAANGEDELKFWEELEEKEFWNGVVDADDEDDP
        LV P  P   L++P    EE  EG E+   ++ EE  E +  EEEE+        ++E  E E   EE   GE+E    EE EE+E      + ++E++ 
Subjt:  LVTP-KPVNELAAP----EEVVEGTEDAAMDKLEELVEADVREEEEDAAVILVVLDKEVVENENPEEEAANGEDELKFWEELEEKEFWNGVVDADDEDDP

Query:  NKFEVDTEEDEAKGLDPNREELEPEAAVEAPNIDDPGLAVGAEVPNNGALEVVAAEDTPPNKDGAEVPADGAAPKKGEDELPADGAAPNEGKGELPEDGA
         + E   EE+E +  +   EE E E   E    ++     G E       E    E+    ++  E   +G   ++GE+E   +     E +GE  E+G 
Subjt:  NKFEVDTEEDEAKGLDPNREELEPEAAVEAPNIDDPGLAVGAEVPNNGALEVVAAEDTPPNKDGAEVPADGAAPKKGEDELPADGAAPNEGKGELPEDGA

Query:  DPNKGATELPEPGAAPNEGTGELPDDGADPNKGANEVPEAEAAPNEGTGELPEVGAAPNEGADEPPDEDETPNPKELNPPEDEEAANNEEPELPEEAPVE
        +  +G  E  E G    EG  E   +  +  +   E  E E    E  GE  E G    EG +E   E+E    +E    E+EE    EE E  EE   E
Subjt:  DPNKGATELPEPGAAPNEGTGELPDDGADPNKGANEVPEAEAAPNEGTGELPEVGAAPNEGADEPPDEDETPNPKELNPPEDEEAANNEEPELPEEAPVE

Query:  AAGREKEKGEEAEEGKEEEAKPKGVEEGGLEAEVDPKEKPVVDENGEEEEEAWEEEEPNEKPDMLIERRWID
          G E+E+GEE EEG+EEE + +  EEG  E E + +E+   +E GEEEEE  EEEE  +  ++ +E    D
Subjt:  AAGREKEKGEEAEEGKEEEAKPKGVEEGGLEAEVDPKEKPVVDENGEEEEEAWEEEEPNEKPDMLIERRWID

A0A3P8WJ05 Si:ch211-194b1.14.4e-0431.18Show/hide
Query:  LVTP-KPVNELAAP----EEVVEGTEDAAMDKLEELVEADVREEEEDAAVILVVLDKEVVENENPEEEAANGEDELKFWEELEEKEFWNGVVDADDEDDP
        LV P  P   L++P    EE  EG E+   ++ EE  E +  EEEE+        ++E  E E   EE   GE+E    EE EE+E      + ++E++ 
Subjt:  LVTP-KPVNELAAP----EEVVEGTEDAAMDKLEELVEADVREEEEDAAVILVVLDKEVVENENPEEEAANGEDELKFWEELEEKEFWNGVVDADDEDDP

Query:  NKFEVDTEEDEAKGLDPNREELEPEAAVEAPNIDDPGLAVGAEVPNNGALEVVAAEDTPPNKDGAEVPADGAAPKKGEDELPADGAAPNEGKGELPEDGA
         + E   EE+E +  +   EE E E   E    ++     G E       E    E+    ++  E   +G   ++GE+E   +     E +GE  E+G 
Subjt:  NKFEVDTEEDEAKGLDPNREELEPEAAVEAPNIDDPGLAVGAEVPNNGALEVVAAEDTPPNKDGAEVPADGAAPKKGEDELPADGAAPNEGKGELPEDGA

Query:  DPNKGATELPEPGAAPNEGTGELPDDGADPNKGANEVPEAEAAPNEGTGELPEVGAAPNEGADEPPDEDETPNPKELNPPEDEEAANNEEPELPEEAPVE
        +  +G  E  E G    EG  E   +  +  +   E  E E    E  GE  E G    EG +E   E+E    +E    E+EE    EE E  EE   E
Subjt:  DPNKGATELPEPGAAPNEGTGELPDDGADPNKGANEVPEAEAAPNEGTGELPEVGAAPNEGADEPPDEDETPNPKELNPPEDEEAANNEEPELPEEAPVE

Query:  AAGREKEKGEEAEEGKEEEAKPKGVEEGGLEAEVDPKEKPVVDENGEEEEEAWEEEEPNEKPDMLIERRWID
          G E+E+GEE EEG+EEE + +  EEG  E E + +E+   +E GEEEEE  EEEE  +  ++ +E    D
Subjt:  AAGREKEKGEEAEEGKEEEAKPKGVEEGGLEAEVDPKEKPVVDENGEEEEEAWEEEEPNEKPDMLIERRWID

A0A3P8WJ12 Si:ch211-194b1.14.4e-0431.18Show/hide
Query:  LVTP-KPVNELAAP----EEVVEGTEDAAMDKLEELVEADVREEEEDAAVILVVLDKEVVENENPEEEAANGEDELKFWEELEEKEFWNGVVDADDEDDP
        LV P  P   L++P    EE  EG E+   ++ EE  E +  EEEE+        ++E  E E   EE   GE+E    EE EE+E      + ++E++ 
Subjt:  LVTP-KPVNELAAP----EEVVEGTEDAAMDKLEELVEADVREEEEDAAVILVVLDKEVVENENPEEEAANGEDELKFWEELEEKEFWNGVVDADDEDDP

Query:  NKFEVDTEEDEAKGLDPNREELEPEAAVEAPNIDDPGLAVGAEVPNNGALEVVAAEDTPPNKDGAEVPADGAAPKKGEDELPADGAAPNEGKGELPEDGA
         + E   EE+E +  +   EE E E   E    ++     G E       E    E+    ++  E   +G   ++GE+E   +     E +GE  E+G 
Subjt:  NKFEVDTEEDEAKGLDPNREELEPEAAVEAPNIDDPGLAVGAEVPNNGALEVVAAEDTPPNKDGAEVPADGAAPKKGEDELPADGAAPNEGKGELPEDGA

Query:  DPNKGATELPEPGAAPNEGTGELPDDGADPNKGANEVPEAEAAPNEGTGELPEVGAAPNEGADEPPDEDETPNPKELNPPEDEEAANNEEPELPEEAPVE
        +  +G  E  E G    EG  E   +  +  +   E  E E    E  GE  E G    EG +E   E+E    +E    E+EE    EE E  EE   E
Subjt:  DPNKGATELPEPGAAPNEGTGELPDDGADPNKGANEVPEAEAAPNEGTGELPEVGAAPNEGADEPPDEDETPNPKELNPPEDEEAANNEEPELPEEAPVE

Query:  AAGREKEKGEEAEEGKEEEAKPKGVEEGGLEAEVDPKEKPVVDENGEEEEEAWEEEEPNEKPDMLIERRWID
          G E+E+GEE EEG+EEE + +  EEG  E E + +E+   +E GEEEEE  EEEE  +  ++ +E    D
Subjt:  AAGREKEKGEEAEEGKEEEAKPKGVEEGGLEAEVDPKEKPVVDENGEEEEEAWEEEEPNEKPDMLIERRWID

A0A5A7T8D7 Major centromere autoantigen B1.1e-6354.85Show/hide
Query:  ILVVLDKEVVENENPEEEAANGEDELKFWEELEEKEFWNGVVDADDEDDPNKFEVDT-----EEDEAKGLD---------------PNREELEPEAAVEA
        +LVVLDK +V NENPE EAANGEDE+KFWEELEE+E WNG +   D+DD NKFEV+T     EED  KGLD               PNRE  EPEA  EA
Subjt:  ILVVLDKEVVENENPEEEAANGEDELKFWEELEEKEFWNGVVDADDEDDPNKFEVDT-----EEDEAKGLD---------------PNREELEPEAAVEA

Query:  PNIDDPGLAVGAEVPNNGALEVVAAEDTPPNKDGA-EVPADGAAPKKGEDELPADGAAPNEGKGELPEDGADPNKGATELPEPGAAPNEGTGELPDDGAD
        PN  DP LA  A VPNNGALEVV AED PPNKDGA + PADGAAP KG DE+PA             E+   P +GATELPE GAAPN+G GELP     
Subjt:  PNIDDPGLAVGAEVPNNGALEVVAAEDTPPNKDGA-EVPADGAAPKKGEDELPADGAAPNEGKGELPEDGADPNKGATELPEPGAAPNEGTGELPDDGAD

Query:  PNKGANEVPEAEAAPNEGTGELPEVGAAPNEGADEPPDEDETPNPKELNPPEDEEAANNEEPE-------LPEEAPVEAAGREKEKGEEAEEGKEEEAKP
        PNK A+EVPE E              AAPN+GA+E  DEDE PNPKELNP EDEE  N +E E       L E+APVEA  REKEKGEE EE KEEE KP
Subjt:  PNKGANEVPEAEAAPNEGTGELPEVGAAPNEGADEPPDEDETPNPKELNPPEDEEAANNEEPE-------LPEEAPVEAAGREKEKGEEAEEGKEEEAKP

Query:  K-GVEEGGLEA-------------------------------EVDPKEKPVVDENGEEEEE
        K   EEGGLE                                 VDPKEKPVV+ENGEEEE+
Subjt:  K-GVEEGGLEA-------------------------------EVDPKEKPVVDENGEEEEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTTGATGAAGCAGCCGTGCTTGTGACGCCAAAACCGGTGAATGAACTCGCAGCACCTGAAGAAGTAGTTGAGGGAACGGAGGATGCTGCTATGGATAAGCTCGA
GGAACTAGTAGAAGCTGATGTAAGAGAAGAAGAAGAAGATGCTGCGGTAATACTAGTAGTTTTGGACAAAGAAGTGGTCGAAAATGAGAACCCAGAAGAAGAAGCCGCAA
ATGGAGAAGACGAACTCAAATTCTGGGAAGAACTCGAAGAAAAAGAGTTCTGGAATGGAGTAGTCGATGCAGATGATGAAGATGACCCAAACAAGTTCGAAGTGGATACC
GAAGAAGATGAAGCAAAGGGATTAGACCCAAACAGGGAGGAGCTTGAACCTGAAGCGGCGGTAGAAGCTCCAAATATCGATGACCCCGGACTTGCAGTGGGTGCAGAAGT
GCCAAACAATGGTGCACTGGAAGTAGTTGCAGCAGAAGACACCCCTCCGAACAAGGACGGAGCCGAGGTCCCTGCAGATGGAGCAGCCCCAAAAAAGGGCGAAGATGAGC
TCCCAGCGGACGGAGCAGCCCCAAACGAGGGCAAAGGGGAGCTTCCAGAGGACGGAGCAGACCCAAACAAGGGCGCAACTGAACTCCCAGAGCCCGGAGCAGCCCCAAAT
GAGGGCACAGGTGAGCTCCCAGATGACGGAGCAGACCCAAACAAGGGCGCAAATGAGGTCCCAGAGGCCGAAGCAGCCCCAAATGAGGGCACAGGTGAGCTCCCAGAGGT
CGGAGCAGCCCCAAATGAAGGAGCAGACGAGCCTCCTGATGAAGATGAAACCCCAAACCCGAAAGAACTCAACCCTCCTGAGGATGAAGAAGCCGCAAACAATGAAGAAC
CTGAACTTCCAGAAGAGGCCCCAGTGGAAGCGGCGGGAAGGGAGAAAGAGAAAGGAGAGGAAGCGGAAGAGGGAAAAGAAGAAGAGGCAAAGCCAAAGGGAGTGGAAGAG
GGAGGATTGGAGGCGGAGGTGGATCCGAAGGAGAAACCAGTGGTTGACGAAAACGGAGAAGAAGAAGAAGAAGCTTGGGAGGAGGAAGAACCAAACGAGAAACCCGACAT
GTTGATTGAACGCCGATGGATCGATCTCCGGCGGCACAGACTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACTTGATGAAGCAGCCGTGCTTGTGACGCCAAAACCGGTGAATGAACTCGCAGCACCTGAAGAAGTAGTTGAGGGAACGGAGGATGCTGCTATGGATAAGCTCGA
GGAACTAGTAGAAGCTGATGTAAGAGAAGAAGAAGAAGATGCTGCGGTAATACTAGTAGTTTTGGACAAAGAAGTGGTCGAAAATGAGAACCCAGAAGAAGAAGCCGCAA
ATGGAGAAGACGAACTCAAATTCTGGGAAGAACTCGAAGAAAAAGAGTTCTGGAATGGAGTAGTCGATGCAGATGATGAAGATGACCCAAACAAGTTCGAAGTGGATACC
GAAGAAGATGAAGCAAAGGGATTAGACCCAAACAGGGAGGAGCTTGAACCTGAAGCGGCGGTAGAAGCTCCAAATATCGATGACCCCGGACTTGCAGTGGGTGCAGAAGT
GCCAAACAATGGTGCACTGGAAGTAGTTGCAGCAGAAGACACCCCTCCGAACAAGGACGGAGCCGAGGTCCCTGCAGATGGAGCAGCCCCAAAAAAGGGCGAAGATGAGC
TCCCAGCGGACGGAGCAGCCCCAAACGAGGGCAAAGGGGAGCTTCCAGAGGACGGAGCAGACCCAAACAAGGGCGCAACTGAACTCCCAGAGCCCGGAGCAGCCCCAAAT
GAGGGCACAGGTGAGCTCCCAGATGACGGAGCAGACCCAAACAAGGGCGCAAATGAGGTCCCAGAGGCCGAAGCAGCCCCAAATGAGGGCACAGGTGAGCTCCCAGAGGT
CGGAGCAGCCCCAAATGAAGGAGCAGACGAGCCTCCTGATGAAGATGAAACCCCAAACCCGAAAGAACTCAACCCTCCTGAGGATGAAGAAGCCGCAAACAATGAAGAAC
CTGAACTTCCAGAAGAGGCCCCAGTGGAAGCGGCGGGAAGGGAGAAAGAGAAAGGAGAGGAAGCGGAAGAGGGAAAAGAAGAAGAGGCAAAGCCAAAGGGAGTGGAAGAG
GGAGGATTGGAGGCGGAGGTGGATCCGAAGGAGAAACCAGTGGTTGACGAAAACGGAGAAGAAGAAGAAGAAGCTTGGGAGGAGGAAGAACCAAACGAGAAACCCGACAT
GTTGATTGAACGCCGATGGATCGATCTCCGGCGGCACAGACTGTGA
Protein sequenceShow/hide protein sequence
MALDEAAVLVTPKPVNELAAPEEVVEGTEDAAMDKLEELVEADVREEEEDAAVILVVLDKEVVENENPEEEAANGEDELKFWEELEEKEFWNGVVDADDEDDPNKFEVDT
EEDEAKGLDPNREELEPEAAVEAPNIDDPGLAVGAEVPNNGALEVVAAEDTPPNKDGAEVPADGAAPKKGEDELPADGAAPNEGKGELPEDGADPNKGATELPEPGAAPN
EGTGELPDDGADPNKGANEVPEAEAAPNEGTGELPEVGAAPNEGADEPPDEDETPNPKELNPPEDEEAANNEEPELPEEAPVEAAGREKEKGEEAEEGKEEEAKPKGVEE
GGLEAEVDPKEKPVVDENGEEEEEAWEEEEPNEKPDMLIERRWIDLRRHRL