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CmoCh17G004770 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G004770
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionserine/arginine repetitive matrix protein 1
Genome locationCmo_Chr17:3529532..3530023
RNA-Seq ExpressionCmoCh17G004770
SyntenyCmoCh17G004770
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575245.1 hypothetical protein SDJN03_25884, partial [Cucurbita argyrosperma subsp. sororia]3.6e-6698.59Show/hide
Query:  PPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAAAVKEKNRTRQGKEQKKDGPPP
        PPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAAAVKEKNRTRQGKEQKKDGPPP
Subjt:  PPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAAAVKEKNRTRQGKEQKKDGPPP

Query:  TEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISETV
        TEGSGSDNSE+ RRVRPLRIKNDWGLRLTELEKRLQEISETV
Subjt:  TEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISETV

XP_022959476.1 uncharacterized protein LOC111460438 [Cucurbita moschata]6.8e-81100Show/hide
Query:  MWTAFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAA
        MWTAFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAA
Subjt:  MWTAFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAA

Query:  AVKEKNRTRQGKEQKKDGPPPTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISETV
        AVKEKNRTRQGKEQKKDGPPPTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISETV
Subjt:  AVKEKNRTRQGKEQKKDGPPPTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISETV

XP_023006674.1 uncharacterized protein LOC111499329 [Cucurbita maxima]3.8e-7695.71Show/hide
Query:  MWTAFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAA
        MW AFSTSPSPSCCRLPLPTRP PTPPVSAIYAKAQPP+TDADNATPNNS+SIKSFGHKILSAA STNPKSRSPIRKQESQLETA+ISGLDVLRALQKAA
Subjt:  MWTAFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAA

Query:  AVKEKNRTRQGKEQKKDGPPPTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISETV
        AVKEKNRTRQ KEQKKDGPPPTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISETV
Subjt:  AVKEKNRTRQGKEQKKDGPPPTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISETV

XP_023547620.1 uncharacterized protein LOC111806506 [Cucurbita pepo subsp. pepo]2.7e-7796.32Show/hide
Query:  MWTAFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAA
        MW AFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNS+SIKSFGHKILSAANSTN KSRSPIRKQESQLETAQISGLDVLRALQKAA
Subjt:  MWTAFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAA

Query:  AVKEKNRTRQGKEQKKDGPPPTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISETV
        AVKEKNR RQG+EQKKDGPPPTEGSGSDNSEMNRRVRPLRIKNDWGLRL ELEKRLQEISETV
Subjt:  AVKEKNRTRQGKEQKKDGPPPTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISETV

XP_038906928.1 uncharacterized protein LOC120092795 [Benincasa hispida]2.4e-4971.43Show/hide
Query:  MWTAFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSP-----IRKQESQLETAQISGLDVLRA
        MW A ST P+PSC RLP+ TRP PTPPVSAIYA++QPP+TDA N TPN+S+SIKSFGHKILSA NS NPKS +P       KQE+Q E AQISG D+LRA
Subjt:  MWTAFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSP-----IRKQESQLETAQISGLDVLRA

Query:  LQKAAAVKEKNRTRQGKEQKKDGPPPTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISETV
        LQKAAAVKEKNRTRQ K +KK+G P TEGS   +SEMN RVRPL+IK DWGLRL++LEKRLQE SE V
Subjt:  LQKAAAVKEKNRTRQGKEQKKDGPPPTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISETV

TrEMBL top hitse value%identityAlignment
A0A0A0KCJ8 Uncharacterized protein9.0e-3963.25Show/hide
Query:  MWTAFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKS-RSPIRKQESQLETAQISGLDVLRALQKA
        MW A STSP PSC RL + T  PPTPP+S   A +QP  TDA+N  PNNS+SIK FGHKILSA NS  PKS      K ES  E AQISG DVLRALQKA
Subjt:  MWTAFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKS-RSPIRKQESQLETAQISGLDVLRALQKA

Query:  AAVKEKNRTRQGKEQKKDGPPPTEGSGSDN--SEMNRRVRPLRIKNDWGLRLTELEKRLQEISETV
        AAVKEK RT+Q KE+KK      EG+ +++  SEMN RVRPL+I  DWGLRLT+LEKRL EIS+ V
Subjt:  AAVKEKNRTRQGKEQKKDGPPPTEGSGSDN--SEMNRRVRPLRIKNDWGLRLTELEKRLQEISETV

A0A1S3CAW4 uncharacterized protein LOC1034987863.3e-4165.24Show/hide
Query:  MWTAFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKS-RSPIRKQESQLETAQISGLDVLRALQKA
        MW A STSPSPS  RLP+ T PPP  PVS  YAK+ PP+ DA+N  PNNS +IKSFGHKILSA NS  P+S      K ESQ E  QISG DVLRALQKA
Subjt:  MWTAFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKS-RSPIRKQESQLETAQISGLDVLRALQKA

Query:  AAVKEKNRTRQGKEQKKDGPPPTEGSGSDN--SEMNRRVRPLRIKNDWGLRLTELEKRLQEISE
        AAVKEKNRT+Q KE+KK      EG+ +++  SEMN RVRPL+IK DWGLRLT+LEKRL E+SE
Subjt:  AAVKEKNRTRQGKEQKKDGPPPTEGSGSDN--SEMNRRVRPLRIKNDWGLRLTELEKRLQEISE

A0A5D3DMB8 Chaperone ClpB3.3e-4165.24Show/hide
Query:  MWTAFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKS-RSPIRKQESQLETAQISGLDVLRALQKA
        MW A STSPSPS  RLP+ T PPP  PVS  YAK+ PP+ DA+N  PNNS +IKSFGHKILSA NS  P+S      K ESQ E  QISG DVLRALQKA
Subjt:  MWTAFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKS-RSPIRKQESQLETAQISGLDVLRALQKA

Query:  AAVKEKNRTRQGKEQKKDGPPPTEGSGSDN--SEMNRRVRPLRIKNDWGLRLTELEKRLQEISE
        AAVKEKNRT+Q KE+KK      EG+ +++  SEMN RVRPL+IK DWGLRLT+LEKRL E+SE
Subjt:  AAVKEKNRTRQGKEQKKDGPPPTEGSGSDN--SEMNRRVRPLRIKNDWGLRLTELEKRLQEISE

A0A6J1H4Y8 uncharacterized protein LOC1114604383.3e-81100Show/hide
Query:  MWTAFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAA
        MWTAFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAA
Subjt:  MWTAFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAA

Query:  AVKEKNRTRQGKEQKKDGPPPTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISETV
        AVKEKNRTRQGKEQKKDGPPPTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISETV
Subjt:  AVKEKNRTRQGKEQKKDGPPPTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISETV

A0A6J1L2U1 uncharacterized protein LOC1114993291.9e-7695.71Show/hide
Query:  MWTAFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAA
        MW AFSTSPSPSCCRLPLPTRP PTPPVSAIYAKAQPP+TDADNATPNNS+SIKSFGHKILSAA STNPKSRSPIRKQESQLETA+ISGLDVLRALQKAA
Subjt:  MWTAFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAA

Query:  AVKEKNRTRQGKEQKKDGPPPTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISETV
        AVKEKNRTRQ KEQKKDGPPPTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISETV
Subjt:  AVKEKNRTRQGKEQKKDGPPPTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISETV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G46735.1 unknown protein1.1e-0735Show/hide
Query:  LPTRPPPTPPVSAIYAKAQPPETDADN---------ATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAAAVKEKNRT
        +P +    P V+   A +QPP  + D               S S+   G +IL     +NP  R PI K+       +ISG DVL A+Q+A A  ++ RT
Subjt:  LPTRPPPTPPVSAIYAKAQPPETDADN---------ATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAAAVKEKNRT

Query:  RQGKEQKKDGPPPTEGSGS------DNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISET
          GK++ K+     E S S      DN      V PLRIK+DWG RL E EK L+E   T
Subjt:  RQGKEQKKDGPPPTEGSGS------DNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISET


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGACTGCCTTCTCGACCTCACCGAGCCCGTCCTGCTGCCGCCTCCCGCTGCCAACCAGGCCGCCTCCGACGCCTCCGGTCTCCGCCATCTACGCGAAGGCTCAGCC
ACCCGAAACCGACGCCGATAACGCCACACCAAACAACAGTACCAGCATCAAAAGCTTCGGCCACAAAATTCTCTCGGCCGCGAACTCCACAAATCCCAAATCCCGCAGCC
CCATCCGAAAACAGGAATCGCAATTGGAGACTGCCCAAATTAGTGGGTTAGATGTTCTGAGGGCACTGCAGAAGGCGGCCGCCGTGAAGGAGAAAAACAGAACCCGACAA
GGGAAAGAACAGAAGAAAGACGGGCCGCCTCCCACCGAAGGGAGCGGCTCTGATAACTCTGAGATGAACCGTAGAGTGAGGCCTCTGAGAATCAAGAACGATTGGGGCTT
GAGACTTACTGAGTTGGAGAAACGCCTTCAGGAGATCTCTGAAACGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGACTGCCTTCTCGACCTCACCGAGCCCGTCCTGCTGCCGCCTCCCGCTGCCAACCAGGCCGCCTCCGACGCCTCCGGTCTCCGCCATCTACGCGAAGGCTCAGCC
ACCCGAAACCGACGCCGATAACGCCACACCAAACAACAGTACCAGCATCAAAAGCTTCGGCCACAAAATTCTCTCGGCCGCGAACTCCACAAATCCCAAATCCCGCAGCC
CCATCCGAAAACAGGAATCGCAATTGGAGACTGCCCAAATTAGTGGGTTAGATGTTCTGAGGGCACTGCAGAAGGCGGCCGCCGTGAAGGAGAAAAACAGAACCCGACAA
GGGAAAGAACAGAAGAAAGACGGGCCGCCTCCCACCGAAGGGAGCGGCTCTGATAACTCTGAGATGAACCGTAGAGTGAGGCCTCTGAGAATCAAGAACGATTGGGGCTT
GAGACTTACTGAGTTGGAGAAACGCCTTCAGGAGATCTCTGAAACGGTTTGA
Protein sequenceShow/hide protein sequence
MWTAFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKILSAANSTNPKSRSPIRKQESQLETAQISGLDVLRALQKAAAVKEKNRTRQ
GKEQKKDGPPPTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISETV