; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh17G004820 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G004820
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationCmo_Chr17:3612779..3614592
RNA-Seq ExpressionCmoCh17G004820
SyntenyCmoCh17G004820
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site
IPR044205 - Calcium-binding protein KIC/PBP1/KRP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575248.1 Calcium-binding protein KIC, partial [Cucurbita argyrosperma subsp. sororia]1.6e-5596.67Show/hide
Query:  MDQNQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS
        MDQNQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLR+NSALLGMEGMKKEEA+SMVREGDLDGDGALNEMEFCILMVRLS
Subjt:  MDQNQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS

Query:  PGMMEDAEGWLQKALDEELT
        PGMMEDAE WLQKALDEEL+
Subjt:  PGMMEDAEGWLQKALDEELT

KAG7013811.1 Calcium-binding protein KIC, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-5596.67Show/hide
Query:  MDQNQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS
        MDQNQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGF+LLADASKGVITAESLR+NSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS
Subjt:  MDQNQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS

Query:  PGMMEDAEGWLQKALDEELT
        PGMMEDAE WLQKALDEEL+
Subjt:  PGMMEDAEGWLQKALDEELT

XP_022958806.1 calcium-binding protein KIC [Cucurbita moschata]2.3e-5799.17Show/hide
Query:  MDQNQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS
        MDQNQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS
Subjt:  MDQNQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS

Query:  PGMMEDAEGWLQKALDEELT
        PGMMEDAEGWLQKALDEEL+
Subjt:  PGMMEDAEGWLQKALDEELT

XP_023006677.1 calcium-binding protein KIC [Cucurbita maxima]1.5e-5697.5Show/hide
Query:  MDQNQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS
        MDQNQHTSSRVVEEYEDLLP+MAQKLDVEVFVAELCSGFRLLADASKGVITAESLR+NSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS
Subjt:  MDQNQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS

Query:  PGMMEDAEGWLQKALDEELT
        PGMMEDAEGWLQKALDEEL+
Subjt:  PGMMEDAEGWLQKALDEELT

XP_023547367.1 calcium-binding protein KIC [Cucurbita pepo subsp. pepo]6.6e-5798.33Show/hide
Query:  MDQNQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS
        MDQNQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLR+NSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS
Subjt:  MDQNQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS

Query:  PGMMEDAEGWLQKALDEELT
        PGMMEDAEGWLQKALDEEL+
Subjt:  PGMMEDAEGWLQKALDEELT

TrEMBL top hitse value%identityAlignment
A0A061DS74 Calcium-binding EF-hand family protein3.8e-4278.76Show/hide
Query:  TSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMED
        T S    +YEDLLPVMA+KLDVE FV+ELC GFRLLAD  +G+IT ESLR+NSALLGMEGM K+EAE MVREGDLDGDGALN+ EFCILMVRLSPGMMED
Subjt:  TSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMED

Query:  AEGWLQKALDEEL
        AE WLQKA+D+EL
Subjt:  AEGWLQKALDEEL

A0A0A0KAP2 EF-hand domain-containing protein6.5e-5088.33Show/hide
Query:  MDQNQHTSSRVVEE-YEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRL
        MDQN +TS RV++E YEDLLPVMAQKLDVEVFVAELCSGFRLLADA+KG+ITAESLR+NSALLGMEGM + EAESMVREGDLDGDGALNEMEFCILMVRL
Subjt:  MDQNQHTSSRVVEE-YEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRL

Query:  SPGMMEDAEGWLQKALDEEL
        SPGMMEDAE WLQKA+DEEL
Subjt:  SPGMMEDAEGWLQKALDEEL

A0A5A7TCH3 Calcium-binding EF-hand family protein1.3e-5088.33Show/hide
Query:  MDQNQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS
        MDQN +TSSRV E YEDLLPVMAQKLDVEVFV+ELCSGFRLLADA+KG+ITAESLR+NSALLGMEGM + EAESMVREGDLDGDGALNEMEFCILMVRLS
Subjt:  MDQNQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS

Query:  PGMMEDAEGWLQKALDEELT
        PGMMEDAE WLQKA+DEEL+
Subjt:  PGMMEDAEGWLQKALDEELT

A0A6J1H361 calcium-binding protein KIC1.1e-5799.17Show/hide
Query:  MDQNQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS
        MDQNQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS
Subjt:  MDQNQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS

Query:  PGMMEDAEGWLQKALDEELT
        PGMMEDAEGWLQKALDEEL+
Subjt:  PGMMEDAEGWLQKALDEELT

A0A6J1KWH6 calcium-binding protein KIC7.1e-5797.5Show/hide
Query:  MDQNQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS
        MDQNQHTSSRVVEEYEDLLP+MAQKLDVEVFVAELCSGFRLLADASKGVITAESLR+NSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS
Subjt:  MDQNQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS

Query:  PGMMEDAEGWLQKALDEELT
        PGMMEDAEGWLQKALDEEL+
Subjt:  PGMMEDAEGWLQKALDEELT

SwissProt top hitse value%identityAlignment
O81831 Calcium-binding protein KRP17.2e-2250.48Show/hide
Query:  YEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQN-SALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQK
        + D LP MA  L  E  + ELC+GF LL D  KGVIT ESLR+N +A+LG+  +  E+   M++EGD D DGALN+MEFC+LM RLSP +ME +   + +
Subjt:  YEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQN-SALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQK

Query:  ALDEE
         ++EE
Subjt:  ALDEE

Q12798 Centrin-11.5e-0637.21Show/hide
Query:  YEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS
        + D L VM QK+  +    E+   FRL  D   G I+ ++L++ +  LG E +  EE + M+ E D DGDG +NE EF  +M + S
Subjt:  YEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS

Q2TBN3 Centrin-21.1e-0636.05Show/hide
Query:  YEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS
        + D L VM QK+  +    E+   F+L  D   G I+ ++L++ +  LG E +  EE + M+ E D DGDG +NE EF  +M + S
Subjt:  YEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS

Q9LSQ6 Calcium-binding protein PBP16.1e-2148.11Show/hide
Query:  EYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQN-SALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQ
        +++D  P MA KL  E  + E+C GF LL D  KGVIT ESLR+N S +LG+  +  ++   M+ EGD D DGALN+MEFC+LM RLSP +ME +   + 
Subjt:  EYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQN-SALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQ

Query:  KALDEE
        + ++EE
Subjt:  KALDEE

Q9ZPX9 Calcium-binding protein KIC6.5e-3968.14Show/hide
Query:  TSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMED
        +++++  +YED+LPVMA+K+DVE FV+ELC GF LLAD  + +ITAESLR+NS +LG+EGM KE+A+ MVREGDLDGDGALN+ EFC+LMVRLSP MMED
Subjt:  TSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMED

Query:  AEGWLQKALDEEL
        AE WL+KAL +EL
Subjt:  AEGWLQKALDEEL

Arabidopsis top hitse value%identityAlignment
AT2G46600.1 Calcium-binding EF-hand family protein4.6e-4068.14Show/hide
Query:  TSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMED
        +++++  +YED+LPVMA+K+DVE FV+ELC GF LLAD  + +ITAESLR+NS +LG+EGM KE+A+ MVREGDLDGDGALN+ EFC+LMVRLSP MMED
Subjt:  TSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMED

Query:  AEGWLQKALDEEL
        AE WL+KAL +EL
Subjt:  AEGWLQKALDEEL

AT3G51920.1 calmodulin 93.9e-0739.53Show/hide
Query:  YEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS
        ++D L +MAQ    E    EL   FR+      G+I+   L +    +GM+ +  EEAE MVRE DLDGDG L+  EF  +M+  S
Subjt:  YEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLS

AT4G14640.1 calmodulin 81.5e-0636.05Show/hide
Query:  EYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRL
        E+ + L +MA+KL       EL   F++      G I+A  L      LG E +  EE E M++E DLDGDG +N  EF  +M+ +
Subjt:  EYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRL

AT4G27280.1 Calcium-binding EF-hand family protein5.1e-2350.48Show/hide
Query:  YEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQN-SALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQK
        + D LP MA  L  E  + ELC+GF LL D  KGVIT ESLR+N +A+LG+  +  E+   M++EGD D DGALN+MEFC+LM RLSP +ME +   + +
Subjt:  YEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQN-SALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQK

Query:  ALDEE
         ++EE
Subjt:  ALDEE

AT5G54490.1 pinoid-binding protein 14.3e-2248.11Show/hide
Query:  EYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQN-SALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQ
        +++D  P MA KL  E  + E+C GF LL D  KGVIT ESLR+N S +LG+  +  ++   M+ EGD D DGALN+MEFC+LM RLSP +ME +   + 
Subjt:  EYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQN-SALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQ

Query:  KALDEE
        + ++EE
Subjt:  KALDEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAAAATCAACATACCTCAAGTAGAGTAGTTGAAGAGTACGAAGACTTGTTGCCAGTGATGGCGCAGAAGCTGGACGTTGAGGTGTTTGTGGCCGAGCTT
TGCAGCGGTTTTCGACTGCTGGCCGATGCATCGAAAGGGGTGATAACAGCGGAGAGTTTACGGCAAAACTCGGCGTTGTTGGGAATGGAAGGGATGAAGAAGGAA
GAAGCGGAGTCGATGGTGAGGGAAGGAGACCTTGATGGGGATGGAGCTCTCAATGAAATGGAATTTTGTATTTTGATGGTGAGGCTTAGCCCAGGAATGATGGAG
GACGCTGAGGGTTGGCTTCAAAAGGCGCTTGATGAAGAATTAACATTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCAAAATCAACATACCTCAAGTAGAGTAGTTGAAGAGTACGAAGACTTGTTGCCAGTGATGGCGCAGAAGCTGGACGTTGAGGTGTTTGTGGCCGAGCTT
TGCAGCGGTTTTCGACTGCTGGCCGATGCATCGAAAGGGGTGATAACAGCGGAGAGTTTACGGCAAAACTCGGCGTTGTTGGGAATGGAAGGGATGAAGAAGGAA
GAAGCGGAGTCGATGGTGAGGGAAGGAGACCTTGATGGGGATGGAGCTCTCAATGAAATGGAATTTTGTATTTTGATGGTGAGGCTTAGCCCAGGAATGATGGAG
GACGCTGAGGGTTGGCTTCAAAAGGCGCTTGATGAAGAATTAACATTATAA
Protein sequenceShow/hide protein sequence
MDQNQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSALLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMME
DAEGWLQKALDEELTL