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CmoCh17G005080 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G005080
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionmajor pollen allergen Ole e 6-like
Genome locationCmo_Chr17:4841768..4842116
RNA-Seq ExpressionCmoCh17G005080
SyntenyCmoCh17G005080
Gene Ontology termsGO:0009733 - response to auxin (biological process)
GO:0010223 - secondary shoot formation (biological process)
GO:0016121 - carotene catabolic process (biological process)
GO:1901601 - strigolactone biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR015333 - Pollen allergen ole e 6
IPR036466 - Pollen allergen ole e 6 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575285.1 Major pollen allergen Ole e 6, partial [Cucurbita argyrosperma subsp. sororia]5.9e-3698.82Show/hide
Query:  MAKKMIVVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVEN
        MAKKMI VLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVEN
Subjt:  MAKKMIVVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVEN

XP_022929811.1 major pollen allergen Ole e 6-like [Cucurbita moschata]1.7e-3597.65Show/hide
Query:  MAKKMIVVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVEN
        MAKKMI VLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKV+N
Subjt:  MAKKMIVVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVEN

XP_022992458.1 major pollen allergen Ole e 6-like [Cucurbita maxima]1.1e-3495.29Show/hide
Query:  MAKKMIVVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVEN
        MAKKMI VLLVCIVV+AALQVSSATES KEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKV+N
Subjt:  MAKKMIVVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVEN

XP_023548654.1 major pollen allergen Ole e 6-like [Cucurbita pepo subsp. pepo]4.2e-3494.12Show/hide
Query:  MAKKMIVVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVEN
        MAKKMI VLLVC+VVV ALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDC EKEAADKLHIKV+N
Subjt:  MAKKMIVVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVEN

XP_023549457.1 major pollen allergen Ole e 6-like [Cucurbita pepo subsp. pepo]3.2e-3495.29Show/hide
Query:  MAKKMIVVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVEN
        MAKKMI VLLVCIVVV ALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDC EKEAADKLHIKV+N
Subjt:  MAKKMIVVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVEN

TrEMBL top hitse value%identityAlignment
A0A5D3BCS2 Major pollen allergen Ole e 6-like6.2e-2369.88Show/hide
Query:  MAKKMIVVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKV
        MAKKMI + L+CIVVVAALQ +SA +  + AKYEAKF+AKY+ C++ CEKECLE G+GQS+CEVKCDEDC EKE ADKLHI++
Subjt:  MAKKMIVVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKV

A0A6J1EQ21 major pollen allergen Ole e 6-like8.3e-3697.65Show/hide
Query:  MAKKMIVVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVEN
        MAKKMI VLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKV+N
Subjt:  MAKKMIVVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVEN

A0A6J1JVQ4 major pollen allergen Ole e 6-like1.9e-3290.59Show/hide
Query:  MAKKMIVVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVEN
        MAKK+I VLLVCIVV+AALQVSSATES KEAKYEAKFEAKYRLCYEKCEKECLEKGN QSFCEVKCDEDC EKE ADKLHIKV+N
Subjt:  MAKKMIVVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVEN

A0A6J1JWQ7 major pollen allergen Ole e 6-like8.6e-3395.06Show/hide
Query:  MIVVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVEN
        MI VLLVCIVV+AALQVSSATES KEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKV+N
Subjt:  MIVVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVEN

A0A6J1JXL5 major pollen allergen Ole e 6-like5.4e-3595.29Show/hide
Query:  MAKKMIVVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVEN
        MAKKMI VLLVCIVV+AALQVSSATES KEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKV+N
Subjt:  MAKKMIVVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVEN

SwissProt top hitse value%identityAlignment
O24172 Major pollen allergen Ole e 69.2e-0854.76Show/hide
Query:  EAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKL
        EA+++ CY+ C KEC +KGNG +FCE+KCD DC  K+  +KL
Subjt:  EAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGAAGATGATTGTAGTGTTGTTGGTGTGCATTGTTGTGGTGGCTGCATTGCAGGTTTCGAGTGCCACTGAAAGCGCGAAGGAGGCCAAATATGAGGCTAAATT
TGAAGCCAAGTATAGGTTATGCTACGAAAAATGCGAGAAGGAATGCCTTGAAAAGGGCAATGGCCAAAGCTTCTGCGAAGTTAAGTGCGATGAAGATTGTGGTGAGAAAG
AAGCCGCTGATAAGCTACACATCAAGGTGGAGAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGAAGATGATTGTAGTGTTGTTGGTGTGCATTGTTGTGGTGGCTGCATTGCAGGTTTCGAGTGCCACTGAAAGCGCGAAGGAGGCCAAATATGAGGCTAAATT
TGAAGCCAAGTATAGGTTATGCTACGAAAAATGCGAGAAGGAATGCCTTGAAAAGGGCAATGGCCAAAGCTTCTGCGAAGTTAAGTGCGATGAAGATTGTGGTGAGAAAG
AAGCCGCTGATAAGCTACACATCAAGGTGGAGAACTGA
Protein sequenceShow/hide protein sequence
MAKKMIVVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVEN