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CmoCh17G005090 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G005090
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionmajor pollen allergen Ole e 6-like
Genome locationCmo_Chr17:4856455..4857942
RNA-Seq ExpressionCmoCh17G005090
SyntenyCmoCh17G005090
Gene Ontology termsGO:0006720 - isoprenoid metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0051213 - dioxygenase activity (molecular function)
InterPro domainsIPR015333 - Pollen allergen ole e 6
IPR036466 - Pollen allergen ole e 6 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575285.1 Major pollen allergen Ole e 6, partial [Cucurbita argyrosperma subsp. sororia]3.6e-2890.28Show/hide
Query:  LLIEYLKVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
        +++  L+VSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKV+N
Subjt:  LLIEYLKVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN

XP_022929811.1 major pollen allergen Ole e 6-like [Cucurbita moschata]1.2e-2891.67Show/hide
Query:  LLIEYLKVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
        +++  L+VSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
Subjt:  LLIEYLKVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN

XP_022991583.1 major pollen allergen Ole e 6-like [Cucurbita maxima]6.2e-2897.01Show/hide
Query:  LKVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
        L+VSSATES KEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
Subjt:  LKVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN

XP_022992458.1 major pollen allergen Ole e 6-like [Cucurbita maxima]6.2e-2897.01Show/hide
Query:  LKVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
        L+VSSATES KEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
Subjt:  LKVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN

XP_023548654.1 major pollen allergen Ole e 6-like [Cucurbita pepo subsp. pepo]1.1e-2790.28Show/hide
Query:  LLIEYLKVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
        +++  L+VSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDC EKEAADKLHIKVKN
Subjt:  LLIEYLKVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN

TrEMBL top hitse value%identityAlignment
A0A0A0KCI6 Uncharacterized protein2.4e-1770.59Show/hide
Query:  LKVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKG-NGQSFCEVKCDEDCGEKEAADKLHIKVKN
        L+ S      KE KYE+KF+AKY+ CYE CEKECLE G NGQSFCEVKCDEDCGEKE+ADKLHI   N
Subjt:  LKVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKG-NGQSFCEVKCDEDCGEKEAADKLHIKVKN

A0A6J1EQ21 major pollen allergen Ole e 6-like6.0e-2991.67Show/hide
Query:  LLIEYLKVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
        +++  L+VSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
Subjt:  LLIEYLKVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN

A0A6J1JVQ4 major pollen allergen Ole e 6-like3.7e-2692.54Show/hide
Query:  LKVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
        L+VSSATES KEAKYEAKFEAKYRLCYEKCEKECLEKGN QSFCEVKCDEDC EKE ADKLHIKVKN
Subjt:  LKVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN

A0A6J1JWQ7 major pollen allergen Ole e 6-like3.0e-2897.01Show/hide
Query:  LKVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
        L+VSSATES KEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
Subjt:  LKVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN

A0A6J1JXL5 major pollen allergen Ole e 6-like3.0e-2897.01Show/hide
Query:  LKVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
        L+VSSATES KEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
Subjt:  LKVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN

SwissProt top hitse value%identityAlignment
O24172 Major pollen allergen Ole e 64.3e-0853.06Show/hide
Query:  EAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKL-HIKVKN
        EA+++ CY+ C KEC +KGNG +FCE+KCD DC  K+  +KL + K KN
Subjt:  EAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKL-HIKVKN

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCGGAGTATAAGGAATCACTACAAGAGAAGTAAGATTCGAATTAACTTGTTGATCGAATATCTCAAGGTTTCGAGTGCCACTGAAAGCGCGAAGGAGGCCAAATA
TGAGGCTAAATTTGAAGCCAAGTATAGGTTATGCTACGAAAAATGCGAGAAGGAATGCCTTGAAAAGGGCAATGGCCAAAGCTTCTGCGAAGTTAAGTGCGATGAAGATT
GTGGTGAGAAAGAAGCCGCTGATAAGCTACACATCAAGGTGAAGAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCCGGAGTATAAGGAATCACTACAAGAGAAGTAAGATTCGAATTAACTTGTTGATCGAATATCTCAAGGTTTCGAGTGCCACTGAAAGCGCGAAGGAGGCCAAATA
TGAGGCTAAATTTGAAGCCAAGTATAGGTTATGCTACGAAAAATGCGAGAAGGAATGCCTTGAAAAGGGCAATGGCCAAAGCTTCTGCGAAGTTAAGTGCGATGAAGATT
GTGGTGAGAAAGAAGCCGCTGATAAGCTACACATCAAGGTGAAGAACTGAATAATGGAATGCAAAACAAACAGGGCTCTTAACAAGGATCTAAATAATAATTGTATTCAA
GTTTAAGCTTGTAAGATGGAGTTTCATAAACCTTCTTTCTCCTCAATTTTTGAGAATTTGATATGAATCATGAATGTTA
Protein sequenceShow/hide protein sequence
MFRSIRNHYKRSKIRINLLIEYLKVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN