CuGenDBv2

Gene ID	CmoCh17G005180
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	major pollen allergen Ole e 6-like
Genome location	Cmo_Chr17:5033828..5034284
RNA-Seq Expression	CmoCh17G005180
Synteny	CmoCh17G005180
Gene Ontology terms	GO:0009733 - response to auxin (biological process) GO:0010223 - secondary shoot formation (biological process) GO:0016121 - carotene catabolic process (biological process) GO:1901601 - strigolactone biosynthetic process (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR015333 - Pollen allergen ole e 6 IPR036466 - Pollen allergen ole e 6 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6575285.1 Major pollen allergen Ole e 6, partial [Cucurbita argyrosperma subsp. sororia]

4.5e-36

98.82

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Query:  MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
        MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKV+N
Subjt:  MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN

XP_022929811.1 major pollen allergen Ole e 6-like [Cucurbita moschata]

1.6e-36

100

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Query:  MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
        MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
Subjt:  MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN

XP_022992458.1 major pollen allergen Ole e 6-like [Cucurbita maxima]

1.0e-35

97.65

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Query:  MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
        MAKKMIAVLLVCIVV+AALQVSSATES KEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
Subjt:  MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN

XP_023548654.1 major pollen allergen Ole e 6-like [Cucurbita pepo subsp. pepo]

3.8e-35

96.47

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Query:  MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
        MAKKMIAVLLVC+VVV ALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDC EKEAADKLHIKVKN
Subjt:  MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN

XP_023549457.1 major pollen allergen Ole e 6-like [Cucurbita pepo subsp. pepo]

2.9e-35

97.65

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Query:  MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
        MAKKMIAVLLVCIVVV ALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDC EKEAADKLHIKVKN
Subjt:  MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN

TrEMBL top hits

e value

%identity

Alignment

A0A5D3BCS2 Major pollen allergen Ole e 6-like

1.2e-23

71.08

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Query:  MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKV
        MAKKMIA+ L+CIVVVAALQ +SA +  + AKYEAKF+AKY+ C++ CEKECLE G+GQS+CEVKCDEDC EKE ADKLHI++
Subjt:  MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKV

A0A6J1EQ21 major pollen allergen Ole e 6-like

7.5e-37

100

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Query:  MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
        MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
Subjt:  MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN

A0A6J1JVQ4 major pollen allergen Ole e 6-like

1.7e-33

92.94

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Query:  MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
        MAKK+IAVLLVCIVV+AALQVSSATES KEAKYEAKFEAKYRLCYEKCEKECLEKGN QSFCEVKCDEDC EKE ADKLHIKVKN
Subjt:  MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN

A0A6J1JWQ7 major pollen allergen Ole e 6-like

6.0e-34

97.53

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Query:  MIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
        MIAVLLVCIVV+AALQVSSATES KEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
Subjt:  MIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN

A0A6J1JXL5 major pollen allergen Ole e 6-like

4.9e-36

97.65

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Query:  MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
        MAKKMIAVLLVCIVV+AALQVSSATES KEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN
Subjt:  MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN

SwissProt top hits

e value

%identity

Alignment

O24172 Major pollen allergen Ole e 6

4.1e-08

53.06

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Query:  EAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKL-HIKVKN
        EA+++ CY+ C KEC +KGNG +FCE+KCD DC  K+  +KL + K KN
Subjt:  EAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKL-HIKVKN

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGCTAAGAAGATGATTGCAGTGTTGTTGGTGTGCATTGTGGTGGTGGCTGCATTGCAGGTTTCGAGTGCCACTGAAAGCGCGAAGGAGGCCAAATATGAGGCTAAATT
TGAAGCCAAGTATAGGTTATGCTACGAAAAATGCGAGAAGGAATGCCTTGAAAAGGGCAATGGCCAAAGCTTCTGCGAAGTTAAGTGCGATGAAGATTGTGGTGAGAAAG
AAGCCGCTGATAAGCTACACATCAAGGTGAAGAACTGA

mRNA sequence

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ATAAAATAAAATGGCTAAGAAGATGATTGCAGTGTTGTTGGTGTGCATTGTGGTGGTGGCTGCATTGCAGGTTTCGAGTGCCACTGAAAGCGCGAAGGAGGCCAAATATG
AGGCTAAATTTGAAGCCAAGTATAGGTTATGCTACGAAAAATGCGAGAAGGAATGCCTTGAAAAGGGCAATGGCCAAAGCTTCTGCGAAGTTAAGTGCGATGAAGATTGT
GGTGAGAAAGAAGCCGCTGATAAGCTACACATCAAGGTGAAGAACTGAATAATGGAATGCAAAACAAACAGGGCTCTTAACAAGGATCTAAATAATAATTGTATTCAAGT
TTAAGCTTGTAAGATGGAGTTTCATAAACCTTCTTTCTCC

Protein sequence

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MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKVKN

CmoCh17G005180 (gene) of Cucurbita moschata (Rifu) v1 genome