; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh17G005230 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G005230
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionBEST Arabidopsis thaliana protein match is: reduced male fertility .
Genome locationCmo_Chr17:5149570..5153659
RNA-Seq ExpressionCmoCh17G005230
SyntenyCmoCh17G005230
Gene Ontology termsGO:0034968 - histone lysine methylation (biological process)
GO:0061458 - reproductive system development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0018024 - histone-lysine N-methyltransferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575300.1 putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia]5.8e-18694.89Show/hide
Query:  MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLM
        MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLM
Subjt:  MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLM

Query:  MLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLE
        MLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLE
Subjt:  MLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLE

Query:  SGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGS
        SGCC+L NVKTGIWIA                GTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGS
Subjt:  SGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGS

Query:  RTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL
        RTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL
Subjt:  RTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL

TYK24589.1 putative F-box protein [Cucumis melo var. makuwa]4.0e-18792.98Show/hide
Query:  MGKKLSIASARDRVVTRSQSIAMEREKIS--SSP--NPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDG
        M KKLSIASARDRVVTRSQSI+MER K+S  SSP  NPVVA EPEGMVKRMRRDIKPIHSCSSP S FLTAHSSASSSASSS+CWYDADVWTEVAKFLDG
Subjt:  MGKKLSIASARDRVVTRSQSIAMEREKIS--SSP--NPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDG

Query:  RSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMD
        RSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFF+DSSV LLSERLGSQ+K+PKQ S  
Subjt:  RSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMD

Query:  NTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKS
        NTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQI+GSHDIRKPTESASGAIFDVKHL+DSSTSGILDLKS
Subjt:  NTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKS

Query:  WTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL
        WTGSR DWQPKAMITL+AVAVNTYLQDNEGVHVKYQAM+AGANGEVVSIRISQQLL
Subjt:  WTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL

XP_004140675.1 probable F-box protein At3g61730 [Cucumis sativus]5.0e-19093.8Show/hide
Query:  MGKKLSIASARDRVVTRSQSIAMEREKI---SSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGR
        MGKKLSIASARDRVVTRSQSI+MER K+   SS  NPVVA EPEGMVKRMRRDIKPIHSCSSPRS FLTAHSSASSSASSS+CWYDADVWTEVAKFLDGR
Subjt:  MGKKLSIASARDRVVTRSQSIAMEREKI---SSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGR

Query:  SLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDN
        SLMMLAATSRWFYR VMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFF+DSSV LLSERLGSQ+KIPKQDS DN
Subjt:  SLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDN

Query:  TLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSW
        TLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQI+GSHDIRKPTESASGAIFDVKHL+DSSTSG+LDLKSW
Subjt:  TLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSW

Query:  TGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL
        TG+RTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAM+AGANGEVVSIRISQQLL
Subjt:  TGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL

XP_023548391.1 probable F-box protein At3g61730 [Cucurbita pepo subsp. pepo]3.1e-20099.72Show/hide
Query:  MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLM
        MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLM
Subjt:  MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLM

Query:  MLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLE
        MLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDS DNTLE
Subjt:  MLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLE

Query:  SGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGS
        SGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGS
Subjt:  SGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGS

Query:  RTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL
        RTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL
Subjt:  RTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL

XP_038875515.1 probable F-box protein At3g61730 [Benincasa hispida]1.2e-19195.48Show/hide
Query:  MGKKLSIASARDRVVTRSQSIAMEREKIS--SSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRS
        MGKKLSIASARDRVVTRS SIAMER K+S  SSPN VVA EPEG VKRMRRDIKPIHSCSSPRS FLTAHSSASSSASSS+CWYDADVWTEVAKFLDGRS
Subjt:  MGKKLSIASARDRVVTRSQSIAMEREKIS--SSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRS

Query:  LMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNT
        LMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFF+DSSV LLSERLGSQ+KIPKQDS D T
Subjt:  LMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNT

Query:  LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWT
        LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQI+GSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWT
Subjt:  LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWT

Query:  GSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL
        GSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL
Subjt:  GSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL

TrEMBL top hitse value%identityAlignment
A0A0A0KD88 Uncharacterized protein2.4e-19093.8Show/hide
Query:  MGKKLSIASARDRVVTRSQSIAMEREKI---SSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGR
        MGKKLSIASARDRVVTRSQSI+MER K+   SS  NPVVA EPEGMVKRMRRDIKPIHSCSSPRS FLTAHSSASSSASSS+CWYDADVWTEVAKFLDGR
Subjt:  MGKKLSIASARDRVVTRSQSIAMEREKI---SSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGR

Query:  SLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDN
        SLMMLAATSRWFYR VMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFF+DSSV LLSERLGSQ+KIPKQDS DN
Subjt:  SLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDN

Query:  TLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSW
        TLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQI+GSHDIRKPTESASGAIFDVKHL+DSSTSG+LDLKSW
Subjt:  TLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSW

Query:  TGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL
        TG+RTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAM+AGANGEVVSIRISQQLL
Subjt:  TGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL

A0A1S3CBL0 probable F-box protein At3g617302.4e-17793.11Show/hide
Query:  MEREKIS--SSP--NPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSI
        MER K+S  SSP  NPVVA EPEGMVKRMRRDIKPIHSCSSP S FLTAHSSASSSASSS+CWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSI
Subjt:  MEREKIS--SSP--NPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSI

Query:  WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLESGCCVLHNVKTGIWIADL
        WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFF+DSSV LLSERLGSQ+K+PKQ S  NTLESGCCVLHNVKTGIWIADL
Subjt:  WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLESGCCVLHNVKTGIWIADL

Query:  QLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVN
        QLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQI+GSHDIRKPTESASGAIFDVKHL+DSSTSGILDLKSWTGSR DWQPKAMITL+AVAVN
Subjt:  QLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVN

Query:  TYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL
        TYLQDNEGVHVKYQAM+AGANGEVVSIRISQQLL
Subjt:  TYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL

A0A5D3DMQ8 Putative F-box protein1.9e-18792.98Show/hide
Query:  MGKKLSIASARDRVVTRSQSIAMEREKIS--SSP--NPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDG
        M KKLSIASARDRVVTRSQSI+MER K+S  SSP  NPVVA EPEGMVKRMRRDIKPIHSCSSP S FLTAHSSASSSASSS+CWYDADVWTEVAKFLDG
Subjt:  MGKKLSIASARDRVVTRSQSIAMEREKIS--SSP--NPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDG

Query:  RSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMD
        RSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFF+DSSV LLSERLGSQ+K+PKQ S  
Subjt:  RSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMD

Query:  NTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKS
        NTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQI+GSHDIRKPTESASGAIFDVKHL+DSSTSGILDLKS
Subjt:  NTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKS

Query:  WTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL
        WTGSR DWQPKAMITL+AVAVNTYLQDNEGVHVKYQAM+AGANGEVVSIRISQQLL
Subjt:  WTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL

A0A6J1DCT6 probable F-box protein At3g617301.0e-17286.76Show/hide
Query:  MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEG-MVKRMRRDIKP--IHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGR
        MGKKLSI+SARDRVVTRSQS AMERE++S   +P+ A EPEG M KR+RRD+K   IH CSSPRS FLT        ASSS+CWYDADVWTEVAKFLDGR
Subjt:  MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEG-MVKRMRRDIKP--IHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGR

Query:  SLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDN
        SLMMLAATSRWFYRLVMEDSIWKYVCLRDLQV APQ TAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF MDSSV LLSERLGSQVKIPKQDS DN
Subjt:  SLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDN

Query:  TLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSW
         LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSW+YQI+GSHDIRKPTE+ASGAIFDVKHL+DSSTSGILD+++W
Subjt:  TLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSW

Query:  TGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL
        +G RTDWQPKAMITL+AVAVNTYLQDNEGVHVKYQAM+ GANGEVVSIRISQQLL
Subjt:  TGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL

A0A6J1EVC3 probable F-box protein At3g617306.1e-157100Show/hide
Query:  YDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSE
        YDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSE
Subjt:  YDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSE

Query:  RLGSQVKIPKQDSMDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVK
        RLGSQVKIPKQDSMDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVK
Subjt:  RLGSQVKIPKQDSMDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVK

Query:  HLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL
        HLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL
Subjt:  HLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL

SwissProt top hitse value%identityAlignment
Q9FGB8 Probable F-box protein At5g360001.0e-10557.76Show/hide
Query:  IKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGS
        ++ IH C SPR +  T  S  S        WY+ D+WT + +FLDG+SL+ L AT++WFY++ MED++W++ CLRDLQVP     +  WIK+Y SAFDGS
Subjt:  IKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGS

Query:  HSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLE-SGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNE
        HSY+F Q+EKH+DWMR+GAF +DS    L+E L  ++K+P + +++  L+ SG C+++++K+GIWIADLQL+RCP+CDL+TCDGTMQTLD RHIELFL+E
Subjt:  HSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLE-SGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNE

Query:  GYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQ
        GY+DGSW+Y ++GSH + K   +A GAIFD+KHLK SS+SGIL+LKSWTG   D QPKA+I  +AVAV+T LQ NEG+ VKY  MKAG +G++VSIRISQ
Subjt:  GYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQ

Query:  QLL
        QLL
Subjt:  QLL

Q9M365 Probable F-box protein At3g617301.7e-10854.52Show/hide
Query:  RDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFY
        R  V +  Q   ++RE+   +   +V    +   ++  + ++ I  C SPR +  T  S  S        WY+ D+WT +++FLDG+SL+ L AT++WFY
Subjt:  RDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFY

Query:  RLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLE-SGCCVLHNV
        ++ MED++W++ CLRDLQVP P   +  WIK+Y SAFDGSHSY+FRQ+EKH+DWMRIGAF +DS   LL+E L  ++K P++ +++  L+ SG C+++++
Subjt:  RLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLE-SGCCVLHNV

Query:  KTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAM
        K+GIWIADLQLVRCPVCDL+TCDGTMQTLDARHIELFL+EGY+DGSW+Y ++GSH ++K   +A GAIFD+KHLK+SS SGIL+LKSWTG   D QPKA+
Subjt:  KTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAM

Query:  ITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL
        I  +AVAV+T LQ+NEG+ VKY  MKAG +G++VSIRISQQLL
Subjt:  ITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL

Arabidopsis top hitse value%identityAlignment
AT3G61730.1 reduced male fertility2.0e-10453.35Show/hide
Query:  RDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFY
        R  V +  Q   ++RE+   +   +V    +   ++  + ++ I  C SPR +  T  S  S        WY+ D+WT +++FLDG+SL+ L AT++WFY
Subjt:  RDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFY

Query:  RLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLE-SGCCVLHNV
        ++ MED++W++ CLRDLQVP P   +  WIK+Y SAFDGSHSY+FRQ+EKH     IGAF +DS   LL+E L  ++K P++ +++  L+ SG C+++++
Subjt:  RLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLE-SGCCVLHNV

Query:  KTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAM
        K+GIWIADLQLVRCPVCDL+TCDGTMQTLDARHIELFL+EGY+DGSW+Y ++GSH ++K   +A GAIFD+KHLK+SS SGIL+LKSWTG   D QPKA+
Subjt:  KTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAM

Query:  ITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL
        I  +AVAV+T LQ+NEG+ VKY  MKAG +G++VSIRISQQLL
Subjt:  ITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL

AT3G62500.1 BEST Arabidopsis thaliana protein match is: SET domain protein 14 (TAIR:AT3G61740.1)5.4e-4151.79Show/hide
Query:  DWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILG
        DWM IGAF +DS   LL+E L  ++K+PK+ +++  L+                 LQLVR PVCDL     TMQTLDARHIELFL+EGY+DGSW+Y ++G
Subjt:  DWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILG

Query:  SHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVK
        SH ++K   +A GAIFD+KH K+SS+SGIL+LKSWTG     QPKA+I  +AVAV+T L++NE   ++
Subjt:  SHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVK

AT5G36000.1 BEST Arabidopsis thaliana protein match is: reduced male fertility (TAIR:AT3G61730.1)7.4e-10757.76Show/hide
Query:  IKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGS
        ++ IH C SPR +  T  S  S        WY+ D+WT + +FLDG+SL+ L AT++WFY++ MED++W++ CLRDLQVP     +  WIK+Y SAFDGS
Subjt:  IKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGS

Query:  HSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLE-SGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNE
        HSY+F Q+EKH+DWMR+GAF +DS    L+E L  ++K+P + +++  L+ SG C+++++K+GIWIADLQL+RCP+CDL+TCDGTMQTLD RHIELFL+E
Subjt:  HSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLE-SGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNE

Query:  GYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQ
        GY+DGSW+Y ++GSH + K   +A GAIFD+KHLK SS+SGIL+LKSWTG   D QPKA+I  +AVAV+T LQ NEG+ VKY  MKAG +G++VSIRISQ
Subjt:  GYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQ

Query:  QLL
        QLL
Subjt:  QLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGAAACTGAGCATTGCCTCTGCGCGAGATCGAGTGGTTACGAGATCTCAATCCATTGCCATGGAGCGTGAGAAAATATCATCATCGCCAAATCCAGTTGTTGC
TGTAGAGCCGGAAGGAATGGTAAAGCGAATGCGAAGAGATATTAAGCCGATTCATTCTTGCAGCTCTCCTCGTTCCACTTTTCTTACTGCTCATTCTTCTGCTTCATCCT
CTGCATCTTCGTCTGCCTGCTGGTATGACGCGGACGTGTGGACAGAGGTGGCGAAGTTTCTGGATGGAAGATCTTTGATGATGCTTGCAGCGACTAGCCGGTGGTTTTAC
CGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTTCAGGTCCCTGCTCCCCAACACACGGCCTTCAAATGGATCAAGCTCTACGTTTCTGCCTT
CGATGGAAGTCACTCTTACATTTTCCGGCAGCAGGAGAAACATCTCGATTGGATGCGGATTGGGGCTTTTTTCATGGATTCTTCCGTAGTACTCCTATCAGAAAGGCTGG
GCTCTCAAGTGAAAATCCCAAAACAGGATTCAATGGATAATACATTGGAGTCCGGTTGTTGTGTCTTGCACAATGTTAAAACTGGGATCTGGATAGCCGATCTACAACTT
GTTCGTTGTCCAGTTTGCGACCTGAATACATGTGATGGAACAATGCAAACGTTGGATGCCAGGCACATAGAGCTGTTCCTGAACGAAGGTTACCAAGATGGTAGTTGGGA
ATATCAGATTTTAGGTTCTCATGATATCAGGAAGCCTACAGAGTCAGCTTCAGGGGCCATTTTTGATGTAAAGCATCTGAAAGACTCTTCAACCTCAGGAATATTGGATC
TAAAGTCATGGACAGGCAGTCGAACCGATTGGCAGCCAAAGGCAATGATTACTCTCAACGCAGTTGCCGTAAATACCTATTTACAAGACAATGAAGGAGTTCACGTGAAA
TACCAGGCCATGAAAGCCGGAGCGAACGGAGAGGTGGTTTCTATCAGAATCTCTCAGCAGCTACTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAGAAACTGAGCATTGCCTCTGCGCGAGATCGAGTGGTTACGAGATCTCAATCCATTGCCATGGAGCGTGAGAAAATATCATCATCGCCAAATCCAGTTGTTGC
TGTAGAGCCGGAAGGAATGGTAAAGCGAATGCGAAGAGATATTAAGCCGATTCATTCTTGCAGCTCTCCTCGTTCCACTTTTCTTACTGCTCATTCTTCTGCTTCATCCT
CTGCATCTTCGTCTGCCTGCTGGTATGACGCGGACGTGTGGACAGAGGTGGCGAAGTTTCTGGATGGAAGATCTTTGATGATGCTTGCAGCGACTAGCCGGTGGTTTTAC
CGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTTCAGGTCCCTGCTCCCCAACACACGGCCTTCAAATGGATCAAGCTCTACGTTTCTGCCTT
CGATGGAAGTCACTCTTACATTTTCCGGCAGCAGGAGAAACATCTCGATTGGATGCGGATTGGGGCTTTTTTCATGGATTCTTCCGTAGTACTCCTATCAGAAAGGCTGG
GCTCTCAAGTGAAAATCCCAAAACAGGATTCAATGGATAATACATTGGAGTCCGGTTGTTGTGTCTTGCACAATGTTAAAACTGGGATCTGGATAGCCGATCTACAACTT
GTTCGTTGTCCAGTTTGCGACCTGAATACATGTGATGGAACAATGCAAACGTTGGATGCCAGGCACATAGAGCTGTTCCTGAACGAAGGTTACCAAGATGGTAGTTGGGA
ATATCAGATTTTAGGTTCTCATGATATCAGGAAGCCTACAGAGTCAGCTTCAGGGGCCATTTTTGATGTAAAGCATCTGAAAGACTCTTCAACCTCAGGAATATTGGATC
TAAAGTCATGGACAGGCAGTCGAACCGATTGGCAGCCAAAGGCAATGATTACTCTCAACGCAGTTGCCGTAAATACCTATTTACAAGACAATGAAGGAGTTCACGTGAAA
TACCAGGCCATGAAAGCCGGAGCGAACGGAGAGGTGGTTTCTATCAGAATCTCTCAGCAGCTACTTTAGTTCCTTCTTCAAATGCCCTTCTTTTATTATTCCTTCTTGTA
CCCCCTGGAGGTCCAACCCCAACCTTTCTCTACTCACTATACTTTGCGCCAAAGATGTGTAATTCCCCAACAAAACAAATCACCAATTTCTATAAATACTTTTCCAGAGG
Protein sequenceShow/hide protein sequence
MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFY
RLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLESGCCVLHNVKTGIWIADLQL
VRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVK
YQAMKAGANGEVVSIRISQQLL