; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh17G005580 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G005580
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionU2 snRNP auxiliary factor large subunit
Genome locationCmo_Chr17:5744314..5747208
RNA-Seq ExpressionCmoCh17G005580
SyntenyCmoCh17G005580
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0008380 - RNA splicing (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013871.1 Splicing factor U2af large subunit B [Cucurbita argyrosperma subsp. argyrosperma]2.1e-101100Show/hide
Query:  MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD
        MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD
Subjt:  MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD

Query:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAI
        RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAI
Subjt:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAI

Query:  LPGATAVAVWKVDNKLHGVIG
        LPGATAVAVWKVDNKLHGVIG
Subjt:  LPGATAVAVWKVDNKLHGVIG

XP_022929824.1 splicing factor U2af large subunit A-like isoform X4 [Cucurbita moschata]2.8e-9394.57Show/hide
Query:  MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD
        MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD
Subjt:  MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD

Query:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAI
        RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAI
Subjt:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAI

Query:  LPGATAVAVWKVDNKLHGVIG
        LPGATAVA  ++      + G
Subjt:  LPGATAVAVWKVDNKLHGVIG

XP_022929825.1 splicing factor U2af large subunit A-like isoform X5 [Cucurbita moschata]1.0e-92100Show/hide
Query:  MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD
        MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD
Subjt:  MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD

Query:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAI
        RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAI
Subjt:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAI

Query:  LPGATAVA
        LPGATAVA
Subjt:  LPGATAVA

XP_023549307.1 splicing factor U2af large subunit A-like isoform X4 [Cucurbita pepo subsp. pepo]1.2e-8891.86Show/hide
Query:  MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD
        MTDYDGRYEGNGEDADNYGDGFSPQAR    GGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDR+RD
Subjt:  MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD

Query:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAI
        RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSP+RSRSRSKSKRISGFDMAPPTTAI
Subjt:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAI

Query:  LPGATAVAVWKVDNKLHGVIG
        LPGATAVA  ++      + G
Subjt:  LPGATAVAVWKVDNKLHGVIG

XP_023549308.1 splicing factor U2af large subunit A-like isoform X5 [Cucurbita pepo subsp. pepo]4.6e-8897.12Show/hide
Query:  MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD
        MTDYDGRYEGNGEDADNYGDGFSPQAR    GGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDR+RD
Subjt:  MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD

Query:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAI
        RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSP+RSRSRSKSKRISGFDMAPPTTAI
Subjt:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAI

Query:  LPGATAVA
        LPGATAVA
Subjt:  LPGATAVA

TrEMBL top hitse value%identityAlignment
A0A6J1D9H3 U2 snRNP auxiliary factor large subunit1.9e-8789.14Show/hide
Query:  MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD
        MTDYDGRYEGNGED DNYGDGFSPQ RGGSHGGHDTHSDSKSQHGSR+YERESSKSR+KER+KGRDREKDRERDR RGRERDREKSKDGERDREKDR+RD
Subjt:  MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD

Query:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAI
        R+KDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRD+DRRRDYDK+REDRHRRRSRSRSKGI EHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAI
Subjt:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAI

Query:  LPGATAVAVWKVDNKLHGVIG
        LPGATA A  ++      + G
Subjt:  LPGATAVAVWKVDNKLHGVIG

A0A6J1DBI7 splicing factor U2af large subunit B-like isoform X11.9e-8789.14Show/hide
Query:  MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD
        MTDYDGRYEGNGED DNYGDGFSPQ RGGSHGGHDTHSDSKSQHGSR+YERESSKSR+KER+KGRDREKDRERDR RGRERDREKSKDGERDREKDR+RD
Subjt:  MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD

Query:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAI
        R+KDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRD+DRRRDYDK+REDRHRRRSRSRSKGI EHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAI
Subjt:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAI

Query:  LPGATAVAVWKVDNKLHGVIG
        LPGATA A  ++      + G
Subjt:  LPGATAVAVWKVDNKLHGVIG

A0A6J1EPW8 U2 snRNP auxiliary factor large subunit1.3e-9394.57Show/hide
Query:  MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD
        MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD
Subjt:  MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD

Query:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAI
        RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAI
Subjt:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAI

Query:  LPGATAVAVWKVDNKLHGVIG
        LPGATAVA  ++      + G
Subjt:  LPGATAVAVWKVDNKLHGVIG

A0A6J1EVD6 U2 snRNP auxiliary factor large subunit5.1e-93100Show/hide
Query:  MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD
        MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD
Subjt:  MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD

Query:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAI
        RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAI
Subjt:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAI

Query:  LPGATAVA
        LPGATAVA
Subjt:  LPGATAVA

A0A6J1JYJ3 U2 snRNP auxiliary factor large subunit1.9e-8790.5Show/hide
Query:  MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD
        MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDT SDSKSQHGSREYERESSKSREKERDKGRD      RDRDRGRERDREKSKDGERDREKDR+RD
Subjt:  MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD

Query:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAI
        RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSP+RSRSRSKSKRISGFDMAPPTTAI
Subjt:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAI

Query:  LPGATAVAVWKVDNKLHGVIG
        LPGATAVA  ++      + G
Subjt:  LPGATAVAVWKVDNKLHGVIG

SwissProt top hitse value%identityAlignment
O23212 Splicing factor U2af large subunit A6.7e-1849.5Show/hide
Query:  YEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERDRDKDRDR
        +EGNG  AD   D    +  GG  G  +   DSK +  SR++ERE+S+S+++ER+KGRD  KDRERD +  R   R + +DGE+ +E+ R++DRD     
Subjt:  YEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERDRDKDRDR

Query:  DRDRHHRDRHRDRGERREGGRSRDDDDYYRS--RDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAILPGAT
         R   HRD  R+RGERRE G  RDDDDY RS  RD+DRRRD   +R  R  RRSRSRSK   E R+RS SPS+S+     +R+SGFDMAPP +A+L    
Subjt:  DRDRHHRDRHRDRGERREGGRSRDDDDYYRS--RDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAILPGAT

Query:  AV
        AV
Subjt:  AV

Q2QZL4 Splicing factor U2af large subunit B2.1e-1952.75Show/hide
Query:  GGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERDRDKDRDRDRDRHHRDR--HRDRGERRE
        GG   G DTH        SRE      + +++ER+K +DRE+ R+RDRDRGR+RDR+K K+ +RD+E+DR+RDRDKDRDR   RHHR+R  HRDR     
Subjt:  GGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERDRDKDRDRDRDRHHRDR--HRDRGERRE

Query:  GGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAILPGATAV
             DD D +RSRD +RRRD++++   RHR RSRSRS+G    R R    SRSRSRSKSKR+SGFDMAPP  A++P   A+
Subjt:  GGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAILPGATAV

Q8L716 Splicing factor U2af large subunit B1.2e-2250.69Show/hide
Query:  MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD
        M  Y+G  +G     +N+ + +       S      H DSKS+  S + +++SSK  EK+ + GRD  KD  +DRDR ++RDREKS+D +R++ +DR+RD
Subjt:  MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD

Query:  RDKDRDRDRDRHHRDRHRDRG-ERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSP--------SPSRSRSRSKSKRISGF
        R++ +DR RDRHHRDRHRDR  ER E     DDD + RSRD DRRR  D++RE RHRRRSRSRS+   E RSRS         S SRSRSRSKSKR SGF
Subjt:  RDKDRDRDRDRHHRDRHRDRG-ERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSP--------SPSRSRSRSKSKRISGF

Query:  DMAPPTTAILPGATAVA
        DMAPP    +  ATAVA
Subjt:  DMAPPTTAILPGATAVA

Q9ZR39 Splicing factor U2af large subunit A3.3e-3359.02Show/hide
Query:  YEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREY--ERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERDRDKDR
        YEGNG D DN  +G SP                 SQH SR++  ER+SS+SR+KERDKGRD+++DR+R+RDR R+RDR K        E+D++R RD+D 
Subjt:  YEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREY--ERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERDRDKDR

Query:  DRDRDRHHRDRHRDRGERREGGRS--RDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAILPG
        ++DRDRHHRDRHRDR +RRE  R+  RD+DD +RSRDYDRRRD DK+RED  RRR R  S+G  EHRS+    SRSRS SKSKRISGFDMAPPTTA+LPG
Subjt:  DRDRDRHHRDRHRDRGERREGGRS--RDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAILPG

Query:  ATAVA
        AT  A
Subjt:  ATAVA

Q9ZR40 Splicing factor U2af large subunit B6.3e-4061.24Show/hide
Query:  YEGNGEDADNYGDGFSPQARGGSHGGH----DTHSDSKSQHGSREYE--RESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERDR
        YEGNGED DNY  G SP  +  S  GH    D +SDSKSQH SRE E  R+SS+SREK+R++GRD+++DR+RDRDRGR+RDR             R+RD+
Subjt:  YEGNGEDADNYGDGFSPQARGGSHGGH----DTHSDSKSQHGSREYE--RESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERDR

Query:  DKDRDRDRDRHHRDRHRDRGERREGGRS--RDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTA
        D++R++DRDRHH DRHRDR +RRE  R+  RDDDD +R+RDYD++R++ K+RE RHR RSRSR  G  EHRSR    SRSRSRSKSKRISGFDMAPPT+A
Subjt:  DKDRDRDRDRHHRDRHRDRGERREGGRS--RDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTA

Query:  ILPGATAVA
        +LPG TA A
Subjt:  ILPGATAVA

Arabidopsis top hitse value%identityAlignment
AT1G60900.1 U2 snRNP auxilliary factor, large subunit, splicing factor8.4e-2450.69Show/hide
Query:  MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD
        M  Y+G  +G     +N+ + +       S      H DSKS+  S + +++SSK  EK+ + GRD  KD  +DRDR ++RDREKS+D +R++ +DR+RD
Subjt:  MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERD

Query:  RDKDRDRDRDRHHRDRHRDRG-ERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSP--------SPSRSRSRSKSKRISGF
        R++ +DR RDRHHRDRHRDR  ER E     DDD + RSRD DRRR  D++RE RHRRRSRSRS+   E RSRS         S SRSRSRSKSKR SGF
Subjt:  RDKDRDRDRDRHHRDRHRDRG-ERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSP--------SPSRSRSRSKSKRISGF

Query:  DMAPPTTAILPGATAVA
        DMAPP    +  ATAVA
Subjt:  DMAPPTTAILPGATAVA

AT4G36690.1 U2 snRNP auxilliary factor, large subunit, splicing factor4.8e-1949.5Show/hide
Query:  YEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERDRDKDRDR
        +EGNG  AD   D    +  GG  G  +   DSK +  SR++ERE+S+S+++ER+KGRD  KDRERD +  R   R + +DGE+ +E+ R++DRD     
Subjt:  YEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERDRDKDRDR

Query:  DRDRHHRDRHRDRGERREGGRSRDDDDYYRS--RDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAILPGAT
         R   HRD  R+RGERRE G  RDDDDY RS  RD+DRRRD   +R  R  RRSRSRSK   E R+RS SPS+S+     +R+SGFDMAPP +A+L    
Subjt:  DRDRHHRDRHRDRGERREGGRSRDDDDYYRS--RDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAILPGAT

Query:  AV
        AV
Subjt:  AV

AT4G36690.2 U2 snRNP auxilliary factor, large subunit, splicing factor4.8e-1949.5Show/hide
Query:  YEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERDRDKDRDR
        +EGNG  AD   D    +  GG  G  +   DSK +  SR++ERE+S+S+++ER+KGRD  KDRERD +  R   R + +DGE+ +E+ R++DRD     
Subjt:  YEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERDRDKDRDR

Query:  DRDRHHRDRHRDRGERREGGRSRDDDDYYRS--RDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAILPGAT
         R   HRD  R+RGERRE G  RDDDDY RS  RD+DRRRD   +R  R  RRSRSRSK   E R+RS SPS+S+     +R+SGFDMAPP +A+L    
Subjt:  DRDRHHRDRHRDRGERREGGRSRDDDDYYRS--RDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAILPGAT

Query:  AV
        AV
Subjt:  AV

AT4G36690.3 U2 snRNP auxilliary factor, large subunit, splicing factor4.8e-1949.5Show/hide
Query:  YEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERDRDKDRDR
        +EGNG  AD   D    +  GG  G  +   DSK +  SR++ERE+S+S+++ER+KGRD  KDRERD +  R   R + +DGE+ +E+ R++DRD     
Subjt:  YEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERDRDKDRDR

Query:  DRDRHHRDRHRDRGERREGGRSRDDDDYYRS--RDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAILPGAT
         R   HRD  R+RGERRE G  RDDDDY RS  RD+DRRRD   +R  R  RRSRSRSK   E R+RS SPS+S+     +R+SGFDMAPP +A+L    
Subjt:  DRDRHHRDRHRDRGERREGGRSRDDDDYYRS--RDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAILPGAT

Query:  AV
        AV
Subjt:  AV

AT4G36690.4 U2 snRNP auxilliary factor, large subunit, splicing factor5.7e-1242Show/hide
Query:  YEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERDRDKDRDR
        +EGNG  AD   D    +  GG  G  +   DSK +  SR++ERE+S+S+++ER+KGRD  KDRERD +  R   R + +DGE+ +E+ R++DRD     
Subjt:  YEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERDRDKDRDR

Query:  DRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAILPGATAV
         R   HRD  R+RGERRE G                          R  RRSRSRSK   E R+RS SPS+S+     +R+SGFDMAPP +A+L    AV
Subjt:  DRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAILPGATAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGATTACGATGGGAGGTACGAAGGTAATGGGGAAGATGCAGACAACTATGGCGATGGTTTTTCTCCTCAAGCTCGTGGTGGCAGCCATGGTGGCCACGACACTCA
CAGTGATTCGAAATCTCAGCATGGTTCTCGAGAATATGAAAGGGAATCTTCAAAAAGTCGAGAAAAAGAAAGAGATAAGGGGCGGGATAGGGAGAAGGACAGGGAGAGGG
ATCGGGACCGAGGTAGAGAAAGGGATAGGGAGAAAAGCAAGGATGGGGAAAGAGACCGGGAGAAAGACAGGGAAAGGGATCGTGACAAGGACCGTGATAGGGATCGTGAC
CGTCATCATAGAGACCGCCATAGGGATCGAGGTGAGAGGAGGGAAGGGGGCAGAAGTAGAGATGATGATGATTACTACAGGAGTAGAGACTACGACAGGCGGAGAGACTA
TGATAAAGAACGAGAAGACAGACATAGACGTAGGTCTCGTTCTCGCTCAAAGGGAATACCTGAACATAGGTCAAGGTCCCCTTCTCCGTCGCGGTCAAGATCACGCTCCA
AAAGCAAACGAATTAGTGGTTTTGACATGGCTCCTCCCACTACTGCAATATTACCTGGTGCAACTGCTGTTGCAGTGTGGAAAGTTGACAACAAATTGCATGGTGTCATT
GGGTAA
mRNA sequenceShow/hide mRNA sequence
ATATAAGGAGAAGGATCTCTCTTCCGAGCCCTAGGATACTCGTTGGCGTGCTTCACCCAATTGCCTCGGGAATTTCAATTTCTCCCCACAAAGAATTCCATATACCAAGC
TGAAACTCTGTGGATCATACACCAAATTCAAACATGACGGATTACGATGGGAGGTACGAAGGTAATGGGGAAGATGCAGACAACTATGGCGATGGTTTTTCTCCTCAAGC
TCGTGGTGGCAGCCATGGTGGCCACGACACTCACAGTGATTCGAAATCTCAGCATGGTTCTCGAGAATATGAAAGGGAATCTTCAAAAAGTCGAGAAAAAGAAAGAGATA
AGGGGCGGGATAGGGAGAAGGACAGGGAGAGGGATCGGGACCGAGGTAGAGAAAGGGATAGGGAGAAAAGCAAGGATGGGGAAAGAGACCGGGAGAAAGACAGGGAAAGG
GATCGTGACAAGGACCGTGATAGGGATCGTGACCGTCATCATAGAGACCGCCATAGGGATCGAGGTGAGAGGAGGGAAGGGGGCAGAAGTAGAGATGATGATGATTACTA
CAGGAGTAGAGACTACGACAGGCGGAGAGACTATGATAAAGAACGAGAAGACAGACATAGACGTAGGTCTCGTTCTCGCTCAAAGGGAATACCTGAACATAGGTCAAGGT
CCCCTTCTCCGTCGCGGTCAAGATCACGCTCCAAAAGCAAACGAATTAGTGGTTTTGACATGGCTCCTCCCACTACTGCAATATTACCTGGTGCAACTGCTGTTGCAGTG
TGGAAAGTTGACAACAAATTGCATGGTGTCATTGGGTAA
Protein sequenceShow/hide protein sequence
MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKERDKGRDREKDRERDRDRGRERDREKSKDGERDREKDRERDRDKDRDRDRD
RHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSRSRSRSKSKRISGFDMAPPTTAILPGATAVAVWKVDNKLHGVI
G