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CmoCh17G006050 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G006050
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR50-like
Genome locationCmo_Chr17:6414979..6415410
RNA-Seq ExpressionCmoCh17G006050
SyntenyCmoCh17G006050
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575385.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]3.5e-6594.07Show/hide
Query:  MDCGKKSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGGNDKLLKTTGGFVTEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEFGFHQQ
        MDCGKKSNKIRDIVRLQQILK+WKRLANGEKS    GGGGNDKLLKTTGGFVTE VPKGYLAVCVGEE KRFVIPTHYLTHQAFRILLREAEEEFGFHQQ
Subjt:  MDCGKKSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGGNDKLLKTTGGFVTEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEFGFHQQ

Query:  GVLQIPCHVSVFQDILNSVQPNHHQFSPDNEIMLS
        GVLQIPCHVSVFQDILNSVQPNHHQFSPDNEI+LS
Subjt:  GVLQIPCHVSVFQDILNSVQPNHHQFSPDNEIMLS

XP_022954048.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]3.9e-72100Show/hide
Query:  MDCGKKSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGGNDKLLKTTGGFVTEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEFGFHQQ
        MDCGKKSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGGNDKLLKTTGGFVTEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEFGFHQQ
Subjt:  MDCGKKSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGGNDKLLKTTGGFVTEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEFGFHQQ

Query:  GVLQIPCHVSVFQDILNSVQPNHHQFSPDNEIMLS
        GVLQIPCHVSVFQDILNSVQPNHHQFSPDNEIMLS
Subjt:  GVLQIPCHVSVFQDILNSVQPNHHQFSPDNEIMLS

XP_022991798.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]4.4e-6891.61Show/hide
Query:  MAGNNEEPMDCGKKSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGGNDKLLKTTGGFVTEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAE
        M GNNEEPMDCGKKSNKIRDIVRLQQILK+WKRLANGEKS    GGGG+DKLLKT+G FVTEDVPKGYLAVCVGEE KRFVIPTHYLTHQAFRILLREAE
Subjt:  MAGNNEEPMDCGKKSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGGNDKLLKTTGGFVTEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAE

Query:  EEFGFHQQGVLQIPCHVSVFQDILNSVQPNHHQFSPDNEIMLS
        EEFGFHQQGVLQIPCHVSVFQDILNSVQPNHH F+PDNEIMLS
Subjt:  EEFGFHQQGVLQIPCHVSVFQDILNSVQPNHHQFSPDNEIMLS

XP_023548425.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]9.5e-6391.11Show/hide
Query:  MDCGKKSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGGNDKLLKTTGGFVTEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEFGFHQQ
        MDCGKKSNKIRDIVRLQQILK+WKRLANGEKS    GGGGNDKLLKT+G  VTEDVPKGYLAVCVGEE KRFVIPTHYLTHQAFRILLREAEEEFGFHQQ
Subjt:  MDCGKKSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGGNDKLLKTTGGFVTEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEFGFHQQ

Query:  GVLQIPCHVSVFQDILNSVQPNHHQFSPDNEIMLS
        GVLQIPCHVSVFQDILNSVQPNHH F+ DNEIMLS
Subjt:  GVLQIPCHVSVFQDILNSVQPNHHQFSPDNEIMLS

XP_038899517.1 auxin-responsive protein SAUR71-like [Benincasa hispida]1.7e-4875.36Show/hide
Query:  EEPMDCGKKSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGGNDKLLKTTGGFVTEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEFGF
        EE  DC KKSNKIR+IVRLQQI+K+WKRLANGEKS          KLLK +G ++T+ VPKGYLAVCVG+E KRFVIPTHYLTHQAFRILL+EAEEEFGF
Subjt:  EEPMDCGKKSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGGNDKLLKTTGGFVTEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEFGF

Query:  HQQGVLQIPCHVSVFQDILNSV-QPNHHQFSP-DNEIM
        HQQGVLQIPCHVSVF+DILN+V Q NH+QF+P DNEI+
Subjt:  HQQGVLQIPCHVSVFQDILNSV-QPNHHQFSP-DNEIM

TrEMBL top hitse value%identityAlignment
A0A0A0K973 Uncharacterized protein7.9e-4772.99Show/hide
Query:  EPMDCGKKSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGGNDKLLKTTGGFVTEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEFGFH
        E  +C KKSNKIR+IV+LQQI+K+WKRLANGEKS        N+KLLK  G + T+ VPKGYLAVCVG+E KRFVIPTHYLTH+AFRILL+EAEEEFGFH
Subjt:  EPMDCGKKSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGGNDKLLKTTGGFVTEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEFGFH

Query:  QQGVLQIPCHVSVFQDILNSV-QPNHHQF-SPDNEIM
        QQGVLQIPCHVSVF+DILN+V Q NH+ F S DNEI+
Subjt:  QQGVLQIPCHVSVFQDILNSV-QPNHHQF-SPDNEIM

A0A1S3CHW6 auxin-responsive protein SAUR71-like4.3e-4574.05Show/hide
Query:  KKSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGGNDKLLKTTGGFVTEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEFGFHQQGVLQ
        KKSNKIR+IV+LQQI+K+WKRLANGEKS        N+KLLKT+G + T+ VPKGYLAVCVG+E KRFVIPTHYLTH+AFRILL+EAEEEFGFHQQGVLQ
Subjt:  KKSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGGNDKLLKTTGGFVTEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEFGFHQQGVLQ

Query:  IPCHVSVFQDILNSVQP--NHHQFSPDNEIM
        IPCHVSVF+DILN VQ   ++H  S DNEI+
Subjt:  IPCHVSVFQDILNSVQP--NHHQFSPDNEIM

A0A5A7UVZ8 Auxin-responsive protein SAUR71-like4.3e-4574.05Show/hide
Query:  KKSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGGNDKLLKTTGGFVTEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEFGFHQQGVLQ
        KKSNKIR+IV+LQQI+K+WKRLANGEKS        N+KLLKT+G + T+ VPKGYLAVCVG+E KRFVIPTHYLTH+AFRILL+EAEEEFGFHQQGVLQ
Subjt:  KKSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGGNDKLLKTTGGFVTEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEFGFHQQGVLQ

Query:  IPCHVSVFQDILNSVQP--NHHQFSPDNEIM
        IPCHVSVF+DILN VQ   ++H  S DNEI+
Subjt:  IPCHVSVFQDILNSVQP--NHHQFSPDNEIM

A0A6J1GQ11 auxin-responsive protein SAUR50-like1.9e-72100Show/hide
Query:  MDCGKKSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGGNDKLLKTTGGFVTEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEFGFHQQ
        MDCGKKSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGGNDKLLKTTGGFVTEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEFGFHQQ
Subjt:  MDCGKKSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGGNDKLLKTTGGFVTEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEFGFHQQ

Query:  GVLQIPCHVSVFQDILNSVQPNHHQFSPDNEIMLS
        GVLQIPCHVSVFQDILNSVQPNHHQFSPDNEIMLS
Subjt:  GVLQIPCHVSVFQDILNSVQPNHHQFSPDNEIMLS

A0A6J1JXB0 auxin-responsive protein SAUR50-like2.1e-6891.61Show/hide
Query:  MAGNNEEPMDCGKKSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGGNDKLLKTTGGFVTEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAE
        M GNNEEPMDCGKKSNKIRDIVRLQQILK+WKRLANGEKS    GGGG+DKLLKT+G FVTEDVPKGYLAVCVGEE KRFVIPTHYLTHQAFRILLREAE
Subjt:  MAGNNEEPMDCGKKSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGGNDKLLKTTGGFVTEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAE

Query:  EEFGFHQQGVLQIPCHVSVFQDILNSVQPNHHQFSPDNEIMLS
        EEFGFHQQGVLQIPCHVSVFQDILNSVQPNHH F+PDNEIMLS
Subjt:  EEFGFHQQGVLQIPCHVSVFQDILNSVQPNHHQFSPDNEIMLS

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR503.8e-1439.66Show/hide
Query:  KKSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGGNDKLLKTTGGFVTEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEFGFHQQGVLQ
        KK++K+     L+QILKR   L  G+K+GGG                +  DVPKG+  V VGE   R+++P  +LTH  F+ LL+ AEEEFGF     L 
Subjt:  KKSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGGNDKLLKTTGGFVTEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEFGFHQQGVLQ

Query:  IPCHVSVFQDILNSVQ
        IPC   VFQ + + ++
Subjt:  IPCHVSVFQDILNSVQ

P33081 Auxin-induced protein 15A1.6e-1261.29Show/hide
Query:  DVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEFGF-HQQGVLQIPCHVSVFQDI
        D PKGYLAV VGE+ KRFVIP  YL   +F+ LL +AEEEFG+ H  G L IPC   VFQ I
Subjt:  DVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEFGF-HQQGVLQIPCHVSVFQDI

P33082 Auxin-induced protein X151.6e-1259.68Show/hide
Query:  DVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEFGF-HQQGVLQIPCHVSVFQDI
        D PKGYLAV VGE+ KRFVIP  Y+   +F+ LL +AEEEFG+ H  G L IPC   VFQ I
Subjt:  DVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEFGF-HQQGVLQIPCHVSVFQDI

Q9SGU2 Auxin-responsive protein SAUR712.7e-1249.23Show/hide
Query:  VPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEFGFHQQGVLQIPCHVSVFQDILNSVQ
        VP+G++ V VG E +RFV+    L H  F  LL+++ +E+G+ QQGVL+IPCHV VF+ IL S++
Subjt:  VPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEFGFHQQGVLQIPCHVSVFQDILNSVQ

Q9ZUZ3 Auxin-responsive protein SAUR322.7e-1242.5Show/hide
Query:  EDVPKGYLAVCV---GEEHKRFVIPTHYLTHQAFRILLREAEEEFGFHQQGVLQIPCHVSVFQDILNSVQPNHHQFSPDN
        +DVPKG LA+ V   GEE +RF++P  Y  H  F  LL+EAE+E+GF Q+G + IPCHV  F+ +   +      ++ +N
Subjt:  EDVPKGYLAVCV---GEEHKRFVIPTHYLTHQAFRILLREAEEEFGFHQQGVLQIPCHVSVFQDILNSVQPNHHQFSPDN

Arabidopsis top hitse value%identityAlignment
AT2G24400.1 SAUR-like auxin-responsive protein family1.2e-3154.96Show/hide
Query:  KKSNKIRDIVRLQQILKRWKRLA--------NGEKSGGGGGGGGNDKLLKTTGGFV-TEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEF
        KKSNKIR+IV+LQQ+LK+W++ A        N E +   GGG  + K LK T  F     VPKGYLAV VG E KR+ IPT YL+HQAF +LLREAEEEF
Subjt:  KKSNKIRDIVRLQQILKRWKRLA--------NGEKSGGGGGGGGNDKLLKTTGGFV-TEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEF

Query:  GFHQQGVLQIPCHVSVFQDILNSVQPNHHQF
        GF Q GVL+IPC VSVF+ IL  ++  +  +
Subjt:  GFHQQGVLQIPCHVSVFQDILNSVQPNHHQF

AT3G43120.1 SAUR-like auxin-responsive protein family3.1e-1941.01Show/hide
Query:  KSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGG----------NDKLL---------KTT--GGFVTEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAF
        K   I+ IVRL++IL++W+ +  G KS  G  G            N +LL         +TT        DVPKGYLAV VG E +RF+IPT++L+H  F
Subjt:  KSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGG----------NDKLL---------KTT--GGFVTEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAF

Query:  RILLREAEEEFGFHQQGVLQIPCHVSVFQDILNSVQPNH
        ++LL +AEEE+GF   G L IPC V  F+ +L  ++ NH
Subjt:  RILLREAEEEFGFHQQGVLQIPCHVSVFQDILNSVQPNH

AT4G31320.1 SAUR-like auxin-responsive protein family6.0e-3149.65Show/hide
Query:  KKSNKIRDIVRLQQILKRWKRLANGEK------------------------SGGGGGGGGNDKLLKTTGGFV-TEDVPKGYLAVCVGEEHKRFVIPTHYL
        KKSNKIR+IV+LQQILK+W+++A+  K                          G G G  + K LK T  F  T  +PKGYLAV VG+E KR+ IPT YL
Subjt:  KKSNKIRDIVRLQQILKRWKRLANGEK------------------------SGGGGGGGGNDKLLKTTGGFV-TEDVPKGYLAVCVGEEHKRFVIPTHYL

Query:  THQAFRILLREAEEEFGFHQQGVLQIPCHVSVFQDILNSVQPN
        +HQAF +LLREAEEEFGF Q G+L+IPC V+VF+ IL  ++ N
Subjt:  THQAFRILLREAEEEFGFHQQGVLQIPCHVSVFQDILNSVQPN

AT5G20810.1 SAUR-like auxin-responsive protein family5.6e-2141.1Show/hide
Query:  KSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGG-----------NDKLLKTTGGFVTE----------DVPKGYLAVCVGEEHKRFVIPTHYLTHQAF
        K   IR IVRL++IL++W+ +  G KS       G           N +LL    G   E          DVPKG LAV VG E +RF+IPT YL+H  F
Subjt:  KSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGG-----------NDKLLKTTGGFVTE----------DVPKGYLAVCVGEEHKRFVIPTHYLTHQAF

Query:  RILLREAEEEFGFHQQGVLQIPCHVSVFQDILNSVQPNHHQFSPDN
        ++LL +AEEEFGF Q G L IPC V  F+ +L  ++ N     PD+
Subjt:  RILLREAEEEFGFHQQGVLQIPCHVSVFQDILNSVQPNHHQFSPDN

AT5G20810.2 SAUR-like auxin-responsive protein family5.6e-2141.1Show/hide
Query:  KSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGG-----------NDKLLKTTGGFVTE----------DVPKGYLAVCVGEEHKRFVIPTHYLTHQAF
        K   IR IVRL++IL++W+ +  G KS       G           N +LL    G   E          DVPKG LAV VG E +RF+IPT YL+H  F
Subjt:  KSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGG-----------NDKLLKTTGGFVTE----------DVPKGYLAVCVGEEHKRFVIPTHYLTHQAF

Query:  RILLREAEEEFGFHQQGVLQIPCHVSVFQDILNSVQPNHHQFSPDN
        ++LL +AEEEFGF Q G L IPC V  F+ +L  ++ N     PD+
Subjt:  RILLREAEEEFGFHQQGVLQIPCHVSVFQDILNSVQPNHHQFSPDN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGAAACAATGAGGAGCCGATGGATTGTGGAAAGAAGTCGAACAAAATCAGAGACATTGTGAGGCTTCAACAAATCCTGAAGAGGTGGAAGAGGTTAGCAAATGG
GGAGAAGAGCGGCGGCGGCGGCGGCGGCGGCGGCAATGATAAGTTGTTGAAGACAACCGGAGGTTTTGTTACCGAGGATGTTCCAAAAGGGTATCTGGCAGTGTGCGTGG
GGGAAGAGCATAAGAGATTTGTAATCCCAACACATTACCTGACCCACCAAGCATTTAGGATATTGCTGCGGGAAGCTGAGGAGGAATTTGGGTTTCACCAACAGGGTGTT
CTTCAGATCCCATGCCATGTCTCTGTCTTTCAAGATATCCTCAACTCTGTCCAACCAAACCACCACCAATTTTCTCCTGATAATGAAATCATGTTATCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGGAAACAATGAGGAGCCGATGGATTGTGGAAAGAAGTCGAACAAAATCAGAGACATTGTGAGGCTTCAACAAATCCTGAAGAGGTGGAAGAGGTTAGCAAATGG
GGAGAAGAGCGGCGGCGGCGGCGGCGGCGGCGGCAATGATAAGTTGTTGAAGACAACCGGAGGTTTTGTTACCGAGGATGTTCCAAAAGGGTATCTGGCAGTGTGCGTGG
GGGAAGAGCATAAGAGATTTGTAATCCCAACACATTACCTGACCCACCAAGCATTTAGGATATTGCTGCGGGAAGCTGAGGAGGAATTTGGGTTTCACCAACAGGGTGTT
CTTCAGATCCCATGCCATGTCTCTGTCTTTCAAGATATCCTCAACTCTGTCCAACCAAACCACCACCAATTTTCTCCTGATAATGAAATCATGTTATCCTGA
Protein sequenceShow/hide protein sequence
MAGNNEEPMDCGKKSNKIRDIVRLQQILKRWKRLANGEKSGGGGGGGGNDKLLKTTGGFVTEDVPKGYLAVCVGEEHKRFVIPTHYLTHQAFRILLREAEEEFGFHQQGV
LQIPCHVSVFQDILNSVQPNHHQFSPDNEIMLS