; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh17G006120 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G006120
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionGolgin family A protein
Genome locationCmo_Chr17:6474238..6474969
RNA-Seq ExpressionCmoCh17G006120
SyntenyCmoCh17G006120
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575392.1 hypothetical protein SDJN03_26031, partial [Cucurbita argyrosperma subsp. sororia]1.5e-12993.17Show/hide
Query:  MSLCLQAKALPVCAWRSDGIRNRAAPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGG
        MSLCLQAKALPVCAWRSDG RNRA PSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFA NLLSGG
Subjt:  MSLCLQAKALPVCAWRSDGIRNRAAPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGG

Query:  DGRRGTGRDGVVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSPGGGG------GSGGGGKRSERRDRLRVKREKSKGVV
        DGRRGTGRDGVVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSPGGGG      G GGGG+RSERR+RLRVKREKSKGV 
Subjt:  DGRRGTGRDGVVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSPGGGG------GSGGGGKRSERRDRLRVKREKSKGVV

Query:  ERSETEVENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTTAKAHLLD
        ERSE + ENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTTAK+HLLD
Subjt:  ERSETEVENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTTAKAHLLD

KAG7013932.1 hypothetical protein SDJN02_24101, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-13094.33Show/hide
Query:  MSLCLQAKALPVCAWRSDGIRNRAAPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGG
        MSLCLQAKALPVCAWRSDG RNRA PSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGG
Subjt:  MSLCLQAKALPVCAWRSDGIRNRAAPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGG

Query:  DGRRGTGRDGVVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSPGGGG----GSGGGGKRSERRDRLRVKREKSKGVVER
        DGRRGTGRDGVVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSPGGGG    G GGGG+RSERR+RLRVKREKSKGV ER
Subjt:  DGRRGTGRDGVVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSPGGGG----GSGGGGKRSERRDRLRVKREKSKGVVER

Query:  SETEVENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTTAKAHLLD
        SE + ENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTTAK+HLLD
Subjt:  SETEVENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTTAKAHLLD

XP_022953699.1 uncharacterized protein LOC111456149 [Cucurbita moschata]2.0e-137100Show/hide
Query:  MSLCLQAKALPVCAWRSDGIRNRAAPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGG
        MSLCLQAKALPVCAWRSDGIRNRAAPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGG
Subjt:  MSLCLQAKALPVCAWRSDGIRNRAAPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGG

Query:  DGRRGTGRDGVVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSPGGGGGSGGGGKRSERRDRLRVKREKSKGVVERSETE
        DGRRGTGRDGVVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSPGGGGGSGGGGKRSERRDRLRVKREKSKGVVERSETE
Subjt:  DGRRGTGRDGVVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSPGGGGGSGGGGKRSERRDRLRVKREKSKGVVERSETE

Query:  VENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTTAKAHLLD
        VENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTTAKAHLLD
Subjt:  VENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTTAKAHLLD

XP_022992375.1 uncharacterized protein LOC111488702 [Cucurbita maxima]1.2e-12191.43Show/hide
Query:  MSLCLQAKALPVCAWRS--DGIRNRAAPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLS
        MSLCLQAKALPVCAWRS  DGIRNRA P+PNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLS
Subjt:  MSLCLQAKALPVCAWRS--DGIRNRAAPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLS

Query:  GGDGRRGTGRDGVVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSPGGGGGSGGGGKRSERRDRLRVKREKSKGVVERSE
        GG GR GT RDGVVSELLEISDRFGWDWDG    GGWRDVNFELLGTSKGGRIPRR +PTAQKVSPGGGG  GGGG+RSERR+RLRVKREKSKGVVERSE
Subjt:  GGDGRRGTGRDGVVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSPGGGGGSGGGGKRSERRDRLRVKREKSKGVVERSE

Query:  TEVENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTTAKAHLLD
         + ENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTTAK+HLLD
Subjt:  TEVENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTTAKAHLLD

XP_023548140.1 uncharacterized protein LOC111806868 [Cucurbita pepo subsp. pepo]5.5e-12792.31Show/hide
Query:  MSLCLQAKALPVCAWRS--DGIRNRAAPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLS
        MSLCLQAKALPVCAWRS  DGIRNRA P+PNPIPPRDRVIGFGRHKGKMLGAL SSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAH+L+S
Subjt:  MSLCLQAKALPVCAWRS--DGIRNRAAPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLS

Query:  GGDGRRGTGRDGVVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSPGGGGGS--GGGGKRSERRDRLRVKREKSKGVVER
        GGDGRRGTGRDGVVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRG+P  QKVSPGGGGGS  GGGG+RSERRDRLRVKREKSKGV ER
Subjt:  GGDGRRGTGRDGVVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSPGGGGGS--GGGGKRSERRDRLRVKREKSKGVVER

Query:  SETEVENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTTAKAHLLD
        SE + ENNPLPTPKAQPDNPVTGMNRRFPGR+TLLNRFTTAK+HLLD
Subjt:  SETEVENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTTAKAHLLD

TrEMBL top hitse value%identityAlignment
A0A0A0K7H6 Uncharacterized protein7.8e-7163.49Show/hide
Query:  SLCLQAKALP---VCAWRSDGIRNRA-APSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLL
        SLCL   AL    V   RS GI  R+ A   NP+P RDRVIGFG+HKGKMLG LPS+YLKWISKNLRAR+ EEWAILADQVLEDP+YQDR+QWEFAHN+L
Subjt:  SLCLQAKALP---VCAWRSDGIRNRA-APSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLL

Query:  SGGDGRRGTGRDGVVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDP-------TAQKVSPGGGGGSGGGGKRSERRDRLRVKREKS
        +G  GR  +GRD VVSEL EISDRFGWDWD   +  GWR V+FELLGTSKGGRIPRR +P       TAQ VS   GGG GGGG+R ERRDRLR KREKS
Subjt:  SGGDGRRGTGRDGVVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDP-------TAQKVSPGGGGGSGGGGKRSERRDRLRVKREKS

Query:  KGVVERSETEVENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTTAKAHLL
         G  E+SE           K + +NPV   N  FPGRQ LL R  T K+ LL
Subjt:  KGVVERSETEVENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTTAKAHLL

A0A1S3CGX9 uncharacterized protein LOC1035006173.5e-7163.56Show/hide
Query:  SLCLQAKA-LPVCAWRSDGIRN---RAAPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLL
        SLCL   A    C WR     N     A   NPIP RDRVIGFG+HKGKMLG LPS+YLKWISKNLRAR+ EEWAILADQVLEDPVYQDR+QWEFAHN+L
Subjt:  SLCLQAKA-LPVCAWRSDGIRN---RAAPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLL

Query:  SGGDGRRGTGRDGVVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPT--AQKVSPGGGGGSGGGGKRSERRDRLRVKREKSKGVVE
        +G  GR  +GRD VVSEL EISDRFGWDWD   +  GWRDV+FELLGTSKGGRIPRR +PT  ++  +     G GGGG+R ERRDRLR KREKSKG  E
Subjt:  SGGDGRRGTGRDGVVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPT--AQKVSPGGGGGSGGGGKRSERRDRLRVKREKSKGVVE

Query:  RSETEVENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTTAKAHLL
        +SE + EN          +NPV   N  FPGRQ LL R TT K+ LL
Subjt:  RSETEVENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTTAKAHLL

A0A5D3BWA7 Uncharacterized protein1.7e-7063.16Show/hide
Query:  SLCLQAKA-LPVCAWRSDGIRN---RAAPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLL
        SLCL   A    C WR     N     A   NPIP RDRVIGFG+HKGKMLG LPS+YLKWISKNLRAR+ EEWA LADQVLEDPVYQDR+QWEFAHN+L
Subjt:  SLCLQAKA-LPVCAWRSDGIRN---RAAPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLL

Query:  SGGDGRRGTGRDGVVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPT--AQKVSPGGGGGSGGGGKRSERRDRLRVKREKSKGVVE
        +G  GR  +GRD VVSEL EISDRFGWDWD   +  GWRDV+FELLGTSKGGRIPRR +PT  ++  +     G GGGG+R ERRDRLR KREKSKG  E
Subjt:  SGGDGRRGTGRDGVVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPT--AQKVSPGGGGGSGGGGKRSERRDRLRVKREKSKGVVE

Query:  RSETEVENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTTAKAHLL
        +SE + EN          +NPV   N  FPGRQ LL R TT K+ LL
Subjt:  RSETEVENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTTAKAHLL

A0A6J1GQE9 uncharacterized protein LOC1114561499.7e-138100Show/hide
Query:  MSLCLQAKALPVCAWRSDGIRNRAAPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGG
        MSLCLQAKALPVCAWRSDGIRNRAAPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGG
Subjt:  MSLCLQAKALPVCAWRSDGIRNRAAPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGG

Query:  DGRRGTGRDGVVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSPGGGGGSGGGGKRSERRDRLRVKREKSKGVVERSETE
        DGRRGTGRDGVVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSPGGGGGSGGGGKRSERRDRLRVKREKSKGVVERSETE
Subjt:  DGRRGTGRDGVVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSPGGGGGSGGGGKRSERRDRLRVKREKSKGVVERSETE

Query:  VENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTTAKAHLLD
        VENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTTAKAHLLD
Subjt:  VENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTTAKAHLLD

A0A6J1JVI9 uncharacterized protein LOC1114887025.7e-12291.43Show/hide
Query:  MSLCLQAKALPVCAWRS--DGIRNRAAPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLS
        MSLCLQAKALPVCAWRS  DGIRNRA P+PNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLS
Subjt:  MSLCLQAKALPVCAWRS--DGIRNRAAPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLS

Query:  GGDGRRGTGRDGVVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSPGGGGGSGGGGKRSERRDRLRVKREKSKGVVERSE
        GG GR GT RDGVVSELLEISDRFGWDWDG    GGWRDVNFELLGTSKGGRIPRR +PTAQKVSPGGGG  GGGG+RSERR+RLRVKREKSKGVVERSE
Subjt:  GGDGRRGTGRDGVVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSPGGGGGSGGGGKRSERRDRLRVKREKSKGVVERSE

Query:  TEVENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTTAKAHLLD
         + ENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTTAK+HLLD
Subjt:  TEVENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTTAKAHLLD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G51080.1 unknown protein2.8e-3644.55Show/hide
Query:  RDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGGDG--------RRGTGRDGVVSELLEISDRFGWD
        RD +I FG+HKGKMLG LPSSYLKW+SKNLRA   E WA LAD+VLED VY+DR +WEFA  +L G D         R+       VS LLEIS+RFGWD
Subjt:  RDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGGDG--------RRGTGRDGVVSELLEISDRFGWD

Query:  WDGGAHDGGWRDVNFELLGTSKGGRIPR----------RGDPTAQK-VSPGGGGGSGGGGKRSERRDRLRVKREKSKG-VVERSETEVENNPLPTPKAQP
         +      GW  +NFELLGTSKGGRIPR          RG+   ++ +          G +R +RR+R+R    +  G  V RSE +     L   + Q 
Subjt:  WDGGAHDGGWRDVNFELLGTSKGGRIPR----------RGDPTAQK-VSPGGGGGSGGGGKRSERRDRLRVKREKSKG-VVERSETEVENNPLPTPKAQP

Query:  DNPVTGMNRRFPGRQTLLNR
        +  +      FPGR++LL +
Subjt:  DNPVTGMNRRFPGRQTLLNR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTGTGTTTGCAGGCGAAGGCGTTGCCGGTGTGTGCGTGGAGAAGCGATGGGATAAGAAACAGGGCAGCTCCCAGCCCTAACCCTATTCCACCCAGAGACCGCGT
GATAGGGTTCGGGCGGCACAAGGGCAAGATGCTGGGAGCCCTGCCTTCATCCTACCTCAAATGGATCTCCAAAAATCTCAGAGCTAGGGACACGGAAGAGTGGGCCATTT
TGGCAGACCAGGTTCTGGAGGACCCGGTTTACCAAGACCGCATCCAGTGGGAGTTCGCCCACAACCTTCTGAGCGGCGGGGATGGGAGAAGGGGAACTGGCCGCGACGGC
GTCGTTTCTGAGCTGTTGGAGATCAGTGATAGGTTTGGCTGGGATTGGGACGGTGGCGCCCACGACGGCGGTTGGAGAGACGTTAACTTCGAGCTCTTGGGGACCTCTAA
AGGTGGAAGAATCCCTCGGCGAGGCGATCCGACGGCGCAGAAGGTGTCGCCGGGCGGAGGCGGAGGCAGTGGCGGTGGCGGAAAAAGGAGCGAGAGAAGAGATCGGCTGA
GGGTGAAGCGAGAGAAATCGAAGGGAGTGGTGGAGAGAAGTGAAACGGAAGTGGAGAACAATCCTCTACCCACTCCCAAAGCTCAACCGGATAATCCGGTTACCGGGATG
AACCGTCGCTTCCCTGGTCGTCAAACTCTGCTAAACCGGTTTACCACAGCCAAAGCACATTTATTGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTGTGTTTGCAGGCGAAGGCGTTGCCGGTGTGTGCGTGGAGAAGCGATGGGATAAGAAACAGGGCAGCTCCCAGCCCTAACCCTATTCCACCCAGAGACCGCGT
GATAGGGTTCGGGCGGCACAAGGGCAAGATGCTGGGAGCCCTGCCTTCATCCTACCTCAAATGGATCTCCAAAAATCTCAGAGCTAGGGACACGGAAGAGTGGGCCATTT
TGGCAGACCAGGTTCTGGAGGACCCGGTTTACCAAGACCGCATCCAGTGGGAGTTCGCCCACAACCTTCTGAGCGGCGGGGATGGGAGAAGGGGAACTGGCCGCGACGGC
GTCGTTTCTGAGCTGTTGGAGATCAGTGATAGGTTTGGCTGGGATTGGGACGGTGGCGCCCACGACGGCGGTTGGAGAGACGTTAACTTCGAGCTCTTGGGGACCTCTAA
AGGTGGAAGAATCCCTCGGCGAGGCGATCCGACGGCGCAGAAGGTGTCGCCGGGCGGAGGCGGAGGCAGTGGCGGTGGCGGAAAAAGGAGCGAGAGAAGAGATCGGCTGA
GGGTGAAGCGAGAGAAATCGAAGGGAGTGGTGGAGAGAAGTGAAACGGAAGTGGAGAACAATCCTCTACCCACTCCCAAAGCTCAACCGGATAATCCGGTTACCGGGATG
AACCGTCGCTTCCCTGGTCGTCAAACTCTGCTAAACCGGTTTACCACAGCCAAAGCACATTTATTGGATTAA
Protein sequenceShow/hide protein sequence
MSLCLQAKALPVCAWRSDGIRNRAAPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGGDGRRGTGRDG
VVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSPGGGGGSGGGGKRSERRDRLRVKREKSKGVVERSETEVENNPLPTPKAQPDNPVTGM
NRRFPGRQTLLNRFTTAKAHLLD