; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh17G006390 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G006390
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionLEA_2 domain-containing protein
Genome locationCmo_Chr17:6665149..6667244
RNA-Seq ExpressionCmoCh17G006390
SyntenyCmoCh17G006390
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575419.1 hypothetical protein SDJN03_26058, partial [Cucurbita argyrosperma subsp. sororia]2.0e-11896.97Show/hide
Query:  MDVLASGTRFSHRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLNSRNPNKIGI
        MDVLASGTRFS+RFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTL S+NPNKIGI
Subjt:  MDVLASGTRFSHRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLNSRNPNKIGI

Query:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATSEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQL
        KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDAT EFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNF+E+L
Subjt:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATSEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQL

Query:  LGNGATVAKALDSFPSNSNTTATNCGVAFYL
        LGNGATVAKALDSFPSNSNTTAT CGVAFYL
Subjt:  LGNGATVAKALDSFPSNSNTTATNCGVAFYL

KAG7013960.1 hypothetical protein SDJN02_24129 [Cucurbita argyrosperma subsp. argyrosperma]7.5e-11896.54Show/hide
Query:  MDVLASGTRFSHRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLNSRNPNKIGI
        MDVLASGTRFS+RFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTL S+NPNKIGI
Subjt:  MDVLASGTRFSHRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLNSRNPNKIGI

Query:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATSEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQL
        KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLF+AT EFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNF+E+L
Subjt:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATSEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQL

Query:  LGNGATVAKALDSFPSNSNTTATNCGVAFYL
        LGNGATVAKALDSFPSNSNTTAT CGVAFYL
Subjt:  LGNGATVAKALDSFPSNSNTTATNCGVAFYL

XP_022953801.1 uncharacterized protein LOC111456218 isoform X1 [Cucurbita moschata]2.3e-122100Show/hide
Query:  MDVLASGTRFSHRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLNSRNPNKIGI
        MDVLASGTRFSHRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLNSRNPNKIGI
Subjt:  MDVLASGTRFSHRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLNSRNPNKIGI

Query:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATSEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQL
        KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATSEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQL
Subjt:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATSEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQL

Query:  LGNGATVAKALDSFPSNSNTTATNCGVAFYL
        LGNGATVAKALDSFPSNSNTTATNCGVAFYL
Subjt:  LGNGATVAKALDSFPSNSNTTATNCGVAFYL

XP_022992383.1 uncharacterized protein LOC111488707 isoform X1 [Cucurbita maxima]8.9e-11996.97Show/hide
Query:  MDVLASGTRFSHRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLNSRNPNKIGI
        MDVLASGTRFS+RFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNS SPFISSVFTLTL S+NPNKIGI
Subjt:  MDVLASGTRFSHRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLNSRNPNKIGI

Query:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATSEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQL
        KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDAT EFVEMKIIGD+GVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQL
Subjt:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATSEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQL

Query:  LGNGATVAKALDSFPSNSNTTATNCGVAFYL
        LGNGATV KALDSFPSNSNTTATNCGVAFYL
Subjt:  LGNGATVAKALDSFPSNSNTTATNCGVAFYL

XP_023548218.1 uncharacterized protein LOC111806923 [Cucurbita pepo subsp. pepo]1.2e-12098.7Show/hide
Query:  MDVLASGTRFSHRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLNSRNPNKIGI
        MDVLASGTRFS+RFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLNSRNPNKIGI
Subjt:  MDVLASGTRFSHRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLNSRNPNKIGI

Query:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATSEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQL
        KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDAT EFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQL
Subjt:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATSEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQL

Query:  LGNGATVAKALDSFPSNSNTTATNCGVAFYL
        LGNGATVAKALDSFPSN+NTTATNCGVAFYL
Subjt:  LGNGATVAKALDSFPSNSNTTATNCGVAFYL

TrEMBL top hitse value%identityAlignment
A0A6J1CZI3 uncharacterized protein LOC111015690 isoform X23.3e-9578.02Show/hide
Query:  MDVLASGTRFSHRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLNSRNPNKIGI
        MDVLAS T+FS+ FCC QICT+YTLKRFC+FLLFIA+FS+IA+ IAALPVI LLKPR+PIFSL+SLRLDWYNIS+ S S F+SSVFTLTLNS+NPN+I I
Subjt:  MDVLASGTRFSHRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLNSRNPNKIGI

Query:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATSEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQL
        KYSPSRLL+I+DGNA+IGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDAT E  E+K++GDVGVEL VLHMAV+KMKVALNC+V V+YR LNFR ++
Subjt:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATSEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQL

Query:  LGNGA-TVAKALDSFPSNSNTTATNCGVAFYL
        L NG+ T+ KAL SF SNS T +TNCG+AFYL
Subjt:  LGNGA-TVAKALDSFPSNSNTTATNCGVAFYL

A0A6J1GP37 uncharacterized protein LOC111456218 isoform X11.1e-122100Show/hide
Query:  MDVLASGTRFSHRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLNSRNPNKIGI
        MDVLASGTRFSHRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLNSRNPNKIGI
Subjt:  MDVLASGTRFSHRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLNSRNPNKIGI

Query:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATSEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQL
        KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATSEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQL
Subjt:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATSEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQL

Query:  LGNGATVAKALDSFPSNSNTTATNCGVAFYL
        LGNGATVAKALDSFPSNSNTTATNCGVAFYL
Subjt:  LGNGATVAKALDSFPSNSNTTATNCGVAFYL

A0A6J1GP89 uncharacterized protein LOC111456218 isoform X22.7e-9785.28Show/hide
Query:  MDVLASGTRFSHRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLNSRNPNKIGI
        MDVLASGTRFSHRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLD                               
Subjt:  MDVLASGTRFSHRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLNSRNPNKIGI

Query:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATSEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQL
           PSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATSEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQL
Subjt:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATSEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQL

Query:  LGNGATVAKALDSFPSNSNTTATNCGVAFYL
        LGNGATVAKALDSFPSNSNTTATNCGVAFYL
Subjt:  LGNGATVAKALDSFPSNSNTTATNCGVAFYL

A0A6J1JXE4 uncharacterized protein LOC111488707 isoform X22.5e-9583.55Show/hide
Query:  MDVLASGTRFSHRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLNSRNPNKIGI
        MDVLASGTRFS+RFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLD                               
Subjt:  MDVLASGTRFSHRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLNSRNPNKIGI

Query:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATSEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQL
           PSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDAT EFVEMKIIGD+GVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQL
Subjt:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATSEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQL

Query:  LGNGATVAKALDSFPSNSNTTATNCGVAFYL
        LGNGATV KALDSFPSNSNTTATNCGVAFYL
Subjt:  LGNGATVAKALDSFPSNSNTTATNCGVAFYL

A0A6J1JZ17 uncharacterized protein LOC111488707 isoform X14.3e-11996.97Show/hide
Query:  MDVLASGTRFSHRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLNSRNPNKIGI
        MDVLASGTRFS+RFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNS SPFISSVFTLTL S+NPNKIGI
Subjt:  MDVLASGTRFSHRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLNSRNPNKIGI

Query:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATSEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQL
        KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDAT EFVEMKIIGD+GVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQL
Subjt:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATSEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQL

Query:  LGNGATVAKALDSFPSNSNTTATNCGVAFYL
        LGNGATV KALDSFPSNSNTTATNCGVAFYL
Subjt:  LGNGATVAKALDSFPSNSNTTATNCGVAFYL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTTCTCGCATCTGGAACTCGATTTTCCCATCGCTTTTGCTGCCACCAGATCTGTACGCTTTATACTCTGAAACGATTCTGCCTTTTCCTCCTCTTCATCGCTCT
CTTCTCGATCATCGCCATCGCCATCGCCGCATTGCCTGTAATCTTCCTATTAAAGCCTCGACAGCCGATCTTTTCTCTCGAATCACTGCGATTGGATTGGTACAACATTA
GCCTCAACTCTGCCTCTCCATTTATTTCTTCGGTTTTCACCTTGACTCTCAACTCTCGAAACCCTAACAAAATCGGCATTAAGTATAGTCCGTCGAGGCTTCTCCTGATC
CACGATGGAAACGCCATGATCGGAACCATACGAGTCCCCGAAGTGTTCCAGCCCGCTCGTAGTGACGATCGGAGTGTTCGAACTCGTCTTCTGCTGCATCGATTCAATGT
CGATTTGTTCGATGCGACGTCAGAGTTTGTTGAGATGAAAATCATTGGCGATGTTGGTGTAGAGCTGTTTGTGCTTCATATGGCTGTGATCAAGATGAAGGTTGCTCTGA
ACTGCAATGTGGATGTTCATTACAGAGGGCTTAATTTCAGAGAACAATTACTCGGCAATGGAGCAACCGTTGCAAAAGCTTTGGATTCATTTCCTTCCAACTCCAACACA
ACGGCCACAAACTGTGGCGTCGCTTTTTACTTATGA
mRNA sequenceShow/hide mRNA sequence
GTTGCTATTATTCTTGATTTAATCCGTGTTCTTCGTGTCTCCAAAATGGCCGTCAATGGATGTTCTCGCATCTGGAACTCGATTTTCCCATCGCTTTTGCTGCCACCAGA
TCTGTACGCTTTATACTCTGAAACGATTCTGCCTTTTCCTCCTCTTCATCGCTCTCTTCTCGATCATCGCCATCGCCATCGCCGCATTGCCTGTAATCTTCCTATTAAAG
CCTCGACAGCCGATCTTTTCTCTCGAATCACTGCGATTGGATTGGTACAACATTAGCCTCAACTCTGCCTCTCCATTTATTTCTTCGGTTTTCACCTTGACTCTCAACTC
TCGAAACCCTAACAAAATCGGCATTAAGTATAGTCCGTCGAGGCTTCTCCTGATCCACGATGGAAACGCCATGATCGGAACCATACGAGTCCCCGAAGTGTTCCAGCCCG
CTCGTAGTGACGATCGGAGTGTTCGAACTCGTCTTCTGCTGCATCGATTCAATGTCGATTTGTTCGATGCGACGTCAGAGTTTGTTGAGATGAAAATCATTGGCGATGTT
GGTGTAGAGCTGTTTGTGCTTCATATGGCTGTGATCAAGATGAAGGTTGCTCTGAACTGCAATGTGGATGTTCATTACAGAGGGCTTAATTTCAGAGAACAATTACTCGG
CAATGGAGCAACCGTTGCAAAAGCTTTGGATTCATTTCCTTCCAACTCCAACACAACGGCCACAAACTGTGGCGTCGCTTTTTACTTATGAAGATGCTTAACTCACTAAT
TAAGTAATTAATGGTTAAATGTTTTGTTTAATCTCTTTTTGGATTTGTTTGTTTTATTTATTAATTTCTTCATGACCCAATTATTTGGATTTTTCTTTTTCTAATGTATA
ATCCATTTTTTTAAACAACCTGCCAATCAAATCATCC
Protein sequenceShow/hide protein sequence
MDVLASGTRFSHRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLNSRNPNKIGIKYSPSRLLLI
HDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATSEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFREQLLGNGATVAKALDSFPSNSNT
TATNCGVAFYL