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CmoCh17G006440 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G006440
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptiondnaJ homolog subfamily B member 6-like
Genome locationCmo_Chr17:6703178..6705168
RNA-Seq ExpressionCmoCh17G006440
SyntenyCmoCh17G006440
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575423.1 hypothetical protein SDJN03_26062, partial [Cucurbita argyrosperma subsp. sororia]7.8e-4696.36Show/hide
Query:  DMGDFLTEMVAMMDQAKPSENGEESFEKLQELFQEMFDDDKEEDGLGPNSPTRYFSSSSSSSYSECSSSGNKRNSSDMNNVNSFQSFSMGS-GGGGGGGG
        DMGDFLTEMVAMMDQ KPSENGEESFEKLQELFQEMFDDD+EEDGLGPNSPTRYFSSSSSSSYSECSSSGNKRNSSDMNNVNSFQSFSMGS GGGGGGGG
Subjt:  DMGDFLTEMVAMMDQAKPSENGEESFEKLQELFQEMFDDDKEEDGLGPNSPTRYFSSSSSSSYSECSSSGNKRNSSDMNNVNSFQSFSMGS-GGGGGGGG

Query:  NKGKNWRRKR
        NKG+NWRRKR
Subjt:  NKGKNWRRKR

KAG7013964.1 DnaJ-like subfamily B member 6 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-4594.64Show/hide
Query:  DMGDFLTEMVAMMDQAKPSENGEESFEKLQELFQEMFDDDKEEDGLGPNSPTRYFSSSSSSSYSECSSSGNKRNSSDMNNVNSFQSFSMGS---GGGGGG
        DMGDFLTEMVAMMDQ KPSENGEESFEKLQELFQEMFDDD+EEDGLGPNSPTRYFSSSSSSSYSECSSSGNKRNSSDMNNVNSFQSFSMGS   GGGGGG
Subjt:  DMGDFLTEMVAMMDQAKPSENGEESFEKLQELFQEMFDDDKEEDGLGPNSPTRYFSSSSSSSYSECSSSGNKRNSSDMNNVNSFQSFSMGS---GGGGGG

Query:  GGNKGKNWRRKR
        GGNKG+NWRRKR
Subjt:  GGNKGKNWRRKR

XP_022953656.1 dnaJ homolog subfamily B member 6-like [Cucurbita moschata]1.7e-48100Show/hide
Query:  DMGDFLTEMVAMMDQAKPSENGEESFEKLQELFQEMFDDDKEEDGLGPNSPTRYFSSSSSSSYSECSSSGNKRNSSDMNNVNSFQSFSMGSGGGGGGGGN
        DMGDFLTEMVAMMDQAKPSENGEESFEKLQELFQEMFDDDKEEDGLGPNSPTRYFSSSSSSSYSECSSSGNKRNSSDMNNVNSFQSFSMGSGGGGGGGGN
Subjt:  DMGDFLTEMVAMMDQAKPSENGEESFEKLQELFQEMFDDDKEEDGLGPNSPTRYFSSSSSSSYSECSSSGNKRNSSDMNNVNSFQSFSMGSGGGGGGGGN

Query:  KGKNWRRKR
        KGKNWRRKR
Subjt:  KGKNWRRKR

XP_022992385.1 dnaJ homolog subfamily B member 6-like [Cucurbita maxima]2.9e-4089.47Show/hide
Query:  DMGDFLTEMVAMMDQAKPSENGEESFEKLQELFQEMF-DDDKEEDGLGPNSPTRYFSSSSSSSYSECSSSGNKRNSS--DMNNVNSFQSFSMGSGGGGG-
        D+GDFLTEMVAMMDQ KPSENGEESFEKLQELFQEMF DDD+EEDGLGPNSPTRYFSSSSSS +SECSSSGNK NSS  DMNNVNSFQSFSMGSGGGGG 
Subjt:  DMGDFLTEMVAMMDQAKPSENGEESFEKLQELFQEMF-DDDKEEDGLGPNSPTRYFSSSSSSSYSECSSSGNKRNSS--DMNNVNSFQSFSMGSGGGGG-

Query:  -GGGNKGKNWRRKR
         GGGNKG+NWRRKR
Subjt:  -GGGNKGKNWRRKR

XP_023548738.1 dnaJ homolog subfamily B member 6-like [Cucurbita pepo subsp. pepo]1.6e-4392.92Show/hide
Query:  DMGDFLTEMVAMMDQAKPSENGEESFEKLQELFQEMFDDDKEEDGLGPNSPTRYFSSSSSSSYSECSSSG-NKRNSSDMNNVNSFQSFSMGS---GGGGG
        DMGDFLTEMVAMMDQ KPSENGEESFEKLQELFQEMFDDD+EEDGLGPNSPTRYFSSS SSSYSECSSSG NKRNSSDMNNVNSFQSFSMGS   GGGGG
Subjt:  DMGDFLTEMVAMMDQAKPSENGEESFEKLQELFQEMFDDDKEEDGLGPNSPTRYFSSSSSSSYSECSSSG-NKRNSSDMNNVNSFQSFSMGS---GGGGG

Query:  GGGNKGKNWRRKR
        GGGNKG+NWRRKR
Subjt:  GGGNKGKNWRRKR

TrEMBL top hitse value%identityAlignment
A0A0A0K7N3 J domain-containing protein2.2e-3378.15Show/hide
Query:  MGDFLTEMVAMMDQAKPSENGEESFEKLQELFQEMFDDDKEEDGLGPNSPTRYF----SSSSSSSYSECSSSGNKRNSSDMNNVNSFQ-----SFSMGSG
        MGDFLTEMVAMMDQ KP+ENGEESFEKLQELFQEMF+DD   DGLG NSPT YF    SSSSSSSYSECS+S NKRNSSDMNN NSFQ     +FSMG G
Subjt:  MGDFLTEMVAMMDQAKPSENGEESFEKLQELFQEMFDDDKEEDGLGPNSPTRYF----SSSSSSSYSECSSSGNKRNSSDMNNVNSFQ-----SFSMGSG

Query:  GGGGGG--GNKGKNWRRKR
        GGGGGG  G+KG+NWRRKR
Subjt:  GGGGGG--GNKGKNWRRKR

A0A1S3CGJ6 dnaJ homolog subfamily B member 6-like7.7e-3175.42Show/hide
Query:  MGDFLTEMVAMMDQAKPSENGEESFEKLQELFQEMFDDDKEEDGLGPNSPTRYF-----SSSSSSSYSECSSSGNKRNSSDMNNVNSFQ-----SFSMGS
        MGDFLTEMVAMMDQ  P+ENGEESFEKLQELFQEMF+DD   DGLGPNSP  YF     SSSSSSSYS CS+S NKRNSSDMNN NSFQ     +FSMG 
Subjt:  MGDFLTEMVAMMDQAKPSENGEESFEKLQELFQEMFDDDKEEDGLGPNSPTRYF-----SSSSSSSYSECSSSGNKRNSSDMNNVNSFQ-----SFSMGS

Query:  GGGGGGGGNKGKNWRRKR
         GGGGG G+KG+NWRRKR
Subjt:  GGGGGGGGNKGKNWRRKR

A0A6J1DGZ0 dnaJ homolog subfamily B member 6 isoform X34.8e-2567.54Show/hide
Query:  MGDFLTEMVAMMDQAKPSENGEESFEKLQELFQEMFDDDKEEDGLGPNSPTRYFSSSSSSSYSECSSSGNKRNSSDMNNVNSFQSFSMG------SGGGG
        MGDFLTEMVAMMDQ KP+ENGEE+FEKLQELFQEMF+ D E     P+SPT YF+S SSS  SECSSS NKRNSS+MNNVNS QS+         S G G
Subjt:  MGDFLTEMVAMMDQAKPSENGEESFEKLQELFQEMFDDDKEEDGLGPNSPTRYFSSSSSSSYSECSSSGNKRNSSDMNNVNSFQSFSMG------SGGGG

Query:  GGGGNKGKNWRRKR
        GGGG+  ++WRRKR
Subjt:  GGGGNKGKNWRRKR

A0A6J1GNM3 dnaJ homolog subfamily B member 6-like8.2e-49100Show/hide
Query:  DMGDFLTEMVAMMDQAKPSENGEESFEKLQELFQEMFDDDKEEDGLGPNSPTRYFSSSSSSSYSECSSSGNKRNSSDMNNVNSFQSFSMGSGGGGGGGGN
        DMGDFLTEMVAMMDQAKPSENGEESFEKLQELFQEMFDDDKEEDGLGPNSPTRYFSSSSSSSYSECSSSGNKRNSSDMNNVNSFQSFSMGSGGGGGGGGN
Subjt:  DMGDFLTEMVAMMDQAKPSENGEESFEKLQELFQEMFDDDKEEDGLGPNSPTRYFSSSSSSSYSECSSSGNKRNSSDMNNVNSFQSFSMGSGGGGGGGGN

Query:  KGKNWRRKR
        KGKNWRRKR
Subjt:  KGKNWRRKR

A0A6J1JVK2 dnaJ homolog subfamily B member 6-like1.4e-4089.47Show/hide
Query:  DMGDFLTEMVAMMDQAKPSENGEESFEKLQELFQEMF-DDDKEEDGLGPNSPTRYFSSSSSSSYSECSSSGNKRNSS--DMNNVNSFQSFSMGSGGGGG-
        D+GDFLTEMVAMMDQ KPSENGEESFEKLQELFQEMF DDD+EEDGLGPNSPTRYFSSSSSS +SECSSSGNK NSS  DMNNVNSFQSFSMGSGGGGG 
Subjt:  DMGDFLTEMVAMMDQAKPSENGEESFEKLQELFQEMF-DDDKEEDGLGPNSPTRYFSSSSSSSYSECSSSGNKRNSS--DMNNVNSFQSFSMGSGGGGG-

Query:  -GGGNKGKNWRRKR
         GGGNKG+NWRRKR
Subjt:  -GGGNKGKNWRRKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGTGATGATGATGATAACGGAAATTGGTGGGGCCATCATCCCTCAAATGTTAAGACTCTGTTTGGTTCACTTTCATTTGCAGGATATGGGTGACTTCTTGACCGA
AATGGTTGCCATGATGGACCAAGCCAAGCCTAGCGAAAACGGAGAAGAAAGCTTCGAGAAACTGCAAGAACTATTCCAAGAAATGTTCGACGATGACAAGGAGGAGGACG
GTTTGGGACCGAATTCACCGACAAGATATTTCTCGTCCTCATCGTCCTCGTCGTACTCCGAATGTTCCAGTTCCGGCAACAAGCGAAACTCGTCGGATATGAACAACGTG
AACTCATTCCAAAGCTTCTCGATGGGGAGTGGAGGAGGCGGCGGCGGCGGCGGCAACAAGGGCAAGAATTGGCGGAGGAAACGGTAG
mRNA sequenceShow/hide mRNA sequence
CCAAAAAACATTTTTTTTTTAAAAAAAAAAAAAAAAAAAACTATAAAAGGGCCATGGTTCTGGAGTGTTCTTGAGCTGAGCCTCTGAGCCAATGGCCTTTCATCGCCTAC
GATTCTTCTCCTGAGAGCTACGATTTCGACATGTCGTTCTCCGCCATCACCATGAATGATCGTTCCGATTCGTCGTTTAACAGGTTTGGATTTCTGTAAACCGAACCAAC
CTGAGCTCTGTTTTGAAGGAAGAGATATGGCTGGTGAGAATCACAAAAACGACGATCTGTATGCCGTTTTGGGGCTGAAGAAGGAATGCACCGAAGCGGAGCTTCGGAAT
GCGTATAAGAAACTTGCTATGATATGGCATCCGGATCGGTGTTCGGCGTTGAGAGATTCGAAGTTCGTGGAAGAAGCTAAGAAGAAATTCCAAGCTATACAGCAAGCCTA
TTCTGTTTTATCGGACGCGAACAAGCGGCTGTTGTACGACGTTGGAGTTTATGACAGTGATGATGATGATAACGGAAATTGGTGGGGCCATCATCCCTCAAATGTTAAGA
CTCTGTTTGGTTCACTTTCATTTGCAGGATATGGGTGACTTCTTGACCGAAATGGTTGCCATGATGGACCAAGCCAAGCCTAGCGAAAACGGAGAAGAAAGCTTCGAGAA
ACTGCAAGAACTATTCCAAGAAATGTTCGACGATGACAAGGAGGAGGACGGTTTGGGACCGAATTCACCGACAAGATATTTCTCGTCCTCATCGTCCTCGTCGTACTCCG
AATGTTCCAGTTCCGGCAACAAGCGAAACTCGTCGGATATGAACAACGTGAACTCATTCCAAAGCTTCTCGATGGGGAGTGGAGGAGGCGGCGGCGGCGGCGGCAACAAG
GGCAAGAATTGGCGGAGGAAACGGTAGAAGAAGAAAAAACACGGCGAAGGAAGACGACATAGGAAGTTGTCGTTTTGAATCAGCGAAGCGGCGCTGATGGTAAAATCTAG
TGTCGTTGCCGAAGCCAAAAGGCAACAACATGGGCGGGACAATGATATGACGATGACGTAATCGTCATATTTACTGTTTTTTTTTTTTAATATTTATATTTCCTTTTTAT
GTAATTGTAAACTTACATTTAATTTCATTTTAGAACTTTTATTTTTATCTCCAAAATTTTATTAACGTC
Protein sequenceShow/hide protein sequence
MTVMMMITEIGGAIIPQMLRLCLVHFHLQDMGDFLTEMVAMMDQAKPSENGEESFEKLQELFQEMFDDDKEEDGLGPNSPTRYFSSSSSSSYSECSSSGNKRNSSDMNNV
NSFQSFSMGSGGGGGGGGNKGKNWRRKR