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CmoCh17G006450 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G006450
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiondormancy-associated protein homolog 4-like
Genome locationCmo_Chr17:6707168..6709161
RNA-Seq ExpressionCmoCh17G006450
SyntenyCmoCh17G006450
Gene Ontology termsNA
InterPro domainsIPR008406 - Dormancy/auxin associated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059373.1 dormancy-associated protein-like protein 4 isoform X2 [Cucumis melo var. makuwa]3.1e-1550.47Show/hide
Query:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKIFGDIPVTRSIFILR----------------------------TVTPEGDLTRFPWKR-S
        MT  LHK+WD TLAGP  D G G LRK+D  S SESP VKI GD+PVTRSI ILR                            T  P+GDL RFPWKR S
Subjt:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKIFGDIPVTRSIFILR----------------------------TVTPEGDLTRFPWKR-S

Query:  AE-LEQD
        AE  +QD
Subjt:  AE-LEQD

KAG6575424.1 Trihelix transcription factor ASIL2, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2192.98Show/hide
Query:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKIFGDIPVTRSIFILRTV
        MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKI GDIPVTRS+FILR +
Subjt:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKIFGDIPVTRSIFILRTV

KAG7013965.1 Dormancy-associated protein-like 4, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-2194.64Show/hide
Query:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKIFGDIPVTRSIFILRT
        MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKI GDIPVTRS+FILR+
Subjt:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKIFGDIPVTRSIFILRT

XP_022964293.1 dormancy-associated protein homolog 4-like [Cucurbita moschata]7.6e-1448.57Show/hide
Query:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKIFGDIPVTRSIFILRT-------------------------VTPEGDLTRFPWKRSA--E
        M   LHKLWD TLAGP  DTG G LRK+DS SV+ESP VKI  DIPVTRSI ILR+                          TPEG   R  W++S+   
Subjt:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKIFGDIPVTRSIFILRT-------------------------VTPEGDLTRFPWKRSA--E

Query:  LEQDG
        +EQDG
Subjt:  LEQDG

XP_038896212.1 dormancy-associated protein homolog 4-like [Benincasa hispida]8.1e-1653.21Show/hide
Query:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKIFGDIPVTRSIFIL--------------------------RTV----TPEGDLTRFPWKR
        MT  LHKLWD TLAGP  DTG G LRK+D  S SESP VKI GDIPVTRSI IL                          RT     TPE DL RFPWKR
Subjt:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKIFGDIPVTRSIFIL--------------------------RTV----TPEGDLTRFPWKR

Query:  SA--ELEQD
        S+   LEQD
Subjt:  SA--ELEQD

TrEMBL top hitse value%identityAlignment
A0A0A0K9D5 Uncharacterized protein7.0e-1349.02Show/hide
Query:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKIFGDIPVTRSIFILR-----------------------TVTP-----EGDLTRFPWKR-S
        M++ LHKLWD TLAGP  D G G LRK+D  S SES  VKI GD+PVTRSI ILR                        +TP     +GDL R PWKR S
Subjt:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKIFGDIPVTRSIFILR-----------------------TVTP-----EGDLTRFPWKR-S

Query:  AE
        AE
Subjt:  AE

A0A5A7UTX0 Dormancy-associated protein-like protein 4 isoform X21.5e-1550.47Show/hide
Query:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKIFGDIPVTRSIFILR----------------------------TVTPEGDLTRFPWKR-S
        MT  LHK+WD TLAGP  D G G LRK+D  S SESP VKI GD+PVTRSI ILR                            T  P+GDL RFPWKR S
Subjt:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKIFGDIPVTRSIFILR----------------------------TVTPEGDLTRFPWKR-S

Query:  AE-LEQD
        AE  +QD
Subjt:  AE-LEQD

A0A6J1DF61 dormancy-associated protein homolog 4-like2.0e-1244.14Show/hide
Query:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKIFGDIPVTRSIFILR-------------------------------TVTPEGDLTRFPWK
        MT+ LHKLWD T+AGP  DTG G LRK+DS S SE P +KI  +IPVTRSI ILR                                 TPE DL RF W+
Subjt:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKIFGDIPVTRSIFILR-------------------------------TVTPEGDLTRFPWK

Query:  RSA--ELEQDG
        +S+    E DG
Subjt:  RSA--ELEQDG

A0A6J1HKD6 dormancy-associated protein homolog 4-like3.7e-1448.57Show/hide
Query:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKIFGDIPVTRSIFILRT-------------------------VTPEGDLTRFPWKRSA--E
        M   LHKLWD TLAGP  DTG G LRK+DS SV+ESP VKI  DIPVTRSI ILR+                          TPEG   R  W++S+   
Subjt:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKIFGDIPVTRSIFILRT-------------------------VTPEGDLTRFPWKRSA--E

Query:  LEQDG
        +EQDG
Subjt:  LEQDG

A0A6J1KIP1 dormancy-associated protein homolog 4-like1.4e-1345.95Show/hide
Query:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKIFGDIPVTRSIFILRT-------------------------------VTPEGDLTRFPWK
        M   LHKLWD TLAGP  DTG G LRK+DS S +ESP VKI  DIPVTRSI ILR+                                TPEG+  R  W+
Subjt:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKIFGDIPVTRSIFILRT-------------------------------VTPEGDLTRFPWK

Query:  RSA--ELEQDG
        +S+   LEQDG
Subjt:  RSA--ELEQDG

SwissProt top hitse value%identityAlignment
F4HV65 Dormancy-associated protein homolog 47.2e-0752.94Show/hide
Query:  LHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKIFGDIPVTRSIFILR
        LHKLWD T+AGP  D G G LRKHDS S   S    +  D  VTRSI + +
Subjt:  LHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKIFGDIPVTRSIFILR

Q8LD26 Dormancy-associated protein homolog 35.7e-0437.31Show/hide
Query:  VLHKLWDGTLAGPMSDTGFGMLRKHDSFSV--------SESPLVKIFGD-------IPVTRSIFILR
        +L  LWD T+AGP  + G G LRKH +FS         SE+   + +G+       + VTRSI I++
Subjt:  VLHKLWDGTLAGPMSDTGFGMLRKHDSFSV--------SESPLVKIFGD-------IPVTRSIFILR

Arabidopsis top hitse value%identityAlignment
AT1G54070.1 Dormancy/auxin associated family protein5.1e-0852.94Show/hide
Query:  LHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKIFGDIPVTRSIFILR
        LHKLWD T+AGP  D G G LRKHDS S   S    +  D  VTRSI + +
Subjt:  LHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKIFGDIPVTRSIFILR

AT1G56220.1 Dormancy/auxin associated family protein4.0e-0537.31Show/hide
Query:  VLHKLWDGTLAGPMSDTGFGMLRKHDSFSV--------SESPLVKIFGD-------IPVTRSIFILR
        +L  LWD T+AGP  + G G LRKH +FS         SE+   + +G+       + VTRSI I++
Subjt:  VLHKLWDGTLAGPMSDTGFGMLRKHDSFSV--------SESPLVKIFGD-------IPVTRSIFILR

AT1G56220.2 Dormancy/auxin associated family protein4.0e-0537.31Show/hide
Query:  VLHKLWDGTLAGPMSDTGFGMLRKHDSFSV--------SESPLVKIFGD-------IPVTRSIFILR
        +L  LWD T+AGP  + G G LRKH +FS         SE+   + +G+       + VTRSI I++
Subjt:  VLHKLWDGTLAGPMSDTGFGMLRKHDSFSV--------SESPLVKIFGD-------IPVTRSIFILR

AT1G56220.3 Dormancy/auxin associated family protein4.0e-0537.31Show/hide
Query:  VLHKLWDGTLAGPMSDTGFGMLRKHDSFSV--------SESPLVKIFGD-------IPVTRSIFILR
        +L  LWD T+AGP  + G G LRKH +FS         SE+   + +G+       + VTRSI I++
Subjt:  VLHKLWDGTLAGPMSDTGFGMLRKHDSFSV--------SESPLVKIFGD-------IPVTRSIFILR

AT1G56220.4 Dormancy/auxin associated family protein4.0e-0537.31Show/hide
Query:  VLHKLWDGTLAGPMSDTGFGMLRKHDSFSV--------SESPLVKIFGD-------IPVTRSIFILR
        +L  LWD T+AGP  + G G LRKH +FS         SE+   + +G+       + VTRSI I++
Subjt:  VLHKLWDGTLAGPMSDTGFGMLRKHDSFSV--------SESPLVKIFGD-------IPVTRSIFILR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGCTGTTCTTCACAAGCTATGGGACGGAACGCTTGCAGGCCCTATGTCAGACACCGGCTTCGGAATGCTTCGCAAGCATGATTCCTTTTCGGTGTCGGAATCGCC
TCTGGTTAAGATTTTCGGTGACATTCCTGTAACTCGGAGCATCTTCATTCTCAGGACGGTGACGCCTGAAGGTGATCTGACGAGATTCCCATGGAAAAGATCGGCTGAAT
TGGAACAAGACGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTGCTGTTCTTCACAAGCTATGGGACGGAACGCTTGCAGGCCCTATGTCAGACACCGGCTTCGGAATGCTTCGCAAGCATGATTCCTTTTCGGTGTCGGAATCGCC
TCTGGTTAAGATTTTCGGTGACATTCCTGTAACTCGGAGCATCTTCATTCTCAGGACGGTGACGCCTGAAGGTGATCTGACGAGATTCCCATGGAAAAGATCGGCTGAAT
TGGAACAAGACGGTTAGAAAGGTTGCCTTGAGTTTCTCGATCAGATCGGCGGTGCCCTCAGCTCCACCTTCTCGGACGGACACTCCAATCTTCTCTTCCATAGCCATCAG
GATCTTAACCTGGGGACCTTCGCATTTCAGATCGC
Protein sequenceShow/hide protein sequence
MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKIFGDIPVTRSIFILRTVTPEGDLTRFPWKRSAELEQDG