; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh17G006710 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G006710
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionHTH myb-type domain-containing protein
Genome locationCmo_Chr17:6896577..6897923
RNA-Seq ExpressionCmoCh17G006710
SyntenyCmoCh17G006710
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059406.1 uncharacterized protein E6C27_scaffold242G001320 [Cucumis melo var. makuwa]4.2e-0967.92Show/hide
Query:  DNTISSWKHPSISIPSSILSRVRELDEIHAQIPPPNHSQGMLGAGVSGRSMHE
        D  ISS KH SISIP+ IL RVREL E+HAQIPP +H QG LG G  G SMHE
Subjt:  DNTISSWKHPSISIPSSILSRVRELDEIHAQIPPPNHSQGMLGAGVSGRSMHE

KAG7013992.1 hypothetical protein SDJN02_24162, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-1583.93Show/hide
Query:  SDDNTISSWKHPSISIPSSILSRVRELDEIHAQIPPPNHSQGMLGAGVSGRSMHER
        SD++   S   PSISIPSSILSRVRELDEIHAQIPPPNHSQG LGAGVSGRSMHER
Subjt:  SDDNTISSWKHPSISIPSSILSRVRELDEIHAQIPPPNHSQGMLGAGVSGRSMHER

XP_008462318.2 PREDICTED: uncharacterized protein LOC103500701 isoform X1 [Cucumis melo]4.2e-0967.92Show/hide
Query:  DNTISSWKHPSISIPSSILSRVRELDEIHAQIPPPNHSQGMLGAGVSGRSMHE
        D  ISS KH SISIP+ IL RVREL E+HAQIPP +H QG LG G  G SMHE
Subjt:  DNTISSWKHPSISIPSSILSRVRELDEIHAQIPPPNHSQGMLGAGVSGRSMHE

XP_008462322.2 PREDICTED: uncharacterized protein LOC103500701 isoform X3 [Cucumis melo]4.2e-0967.92Show/hide
Query:  DNTISSWKHPSISIPSSILSRVRELDEIHAQIPPPNHSQGMLGAGVSGRSMHE
        D  ISS KH SISIP+ IL RVREL E+HAQIPP +H QG LG G  G SMHE
Subjt:  DNTISSWKHPSISIPSSILSRVRELDEIHAQIPPPNHSQGMLGAGVSGRSMHE

XP_016902835.1 PREDICTED: uncharacterized protein LOC103500701 isoform X4 [Cucumis melo]4.2e-0967.92Show/hide
Query:  DNTISSWKHPSISIPSSILSRVRELDEIHAQIPPPNHSQGMLGAGVSGRSMHE
        D  ISS KH SISIP+ IL RVREL E+HAQIPP +H QG LG G  G SMHE
Subjt:  DNTISSWKHPSISIPSSILSRVRELDEIHAQIPPPNHSQGMLGAGVSGRSMHE

TrEMBL top hitse value%identityAlignment
A0A1S3CGM9 uncharacterized protein LOC103500701 isoform X32.0e-0967.92Show/hide
Query:  DNTISSWKHPSISIPSSILSRVRELDEIHAQIPPPNHSQGMLGAGVSGRSMHE
        D  ISS KH SISIP+ IL RVREL E+HAQIPP +H QG LG G  G SMHE
Subjt:  DNTISSWKHPSISIPSSILSRVRELDEIHAQIPPPNHSQGMLGAGVSGRSMHE

A0A1S3CGR3 uncharacterized protein LOC103500701 isoform X22.0e-0967.92Show/hide
Query:  DNTISSWKHPSISIPSSILSRVRELDEIHAQIPPPNHSQGMLGAGVSGRSMHE
        D  ISS KH SISIP+ IL RVREL E+HAQIPP +H QG LG G  G SMHE
Subjt:  DNTISSWKHPSISIPSSILSRVRELDEIHAQIPPPNHSQGMLGAGVSGRSMHE

A0A1S3CI77 uncharacterized protein LOC103500701 isoform X12.0e-0967.92Show/hide
Query:  DNTISSWKHPSISIPSSILSRVRELDEIHAQIPPPNHSQGMLGAGVSGRSMHE
        D  ISS KH SISIP+ IL RVREL E+HAQIPP +H QG LG G  G SMHE
Subjt:  DNTISSWKHPSISIPSSILSRVRELDEIHAQIPPPNHSQGMLGAGVSGRSMHE

A0A1S4E4D2 uncharacterized protein LOC103500701 isoform X42.0e-0967.92Show/hide
Query:  DNTISSWKHPSISIPSSILSRVRELDEIHAQIPPPNHSQGMLGAGVSGRSMHE
        D  ISS KH SISIP+ IL RVREL E+HAQIPP +H QG LG G  G SMHE
Subjt:  DNTISSWKHPSISIPSSILSRVRELDEIHAQIPPPNHSQGMLGAGVSGRSMHE

A0A5D3BW39 HTH myb-type domain-containing protein2.0e-0967.92Show/hide
Query:  DNTISSWKHPSISIPSSILSRVRELDEIHAQIPPPNHSQGMLGAGVSGRSMHE
        D  ISS KH SISIP+ IL RVREL E+HAQIPP +H QG LG G  G SMHE
Subjt:  DNTISSWKHPSISIPSSILSRVRELDEIHAQIPPPNHSQGMLGAGVSGRSMHE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCAGATGAGGCAGAGAAGACTTTGGCGATGAAGCAAACAACTTTTGGGTGTGCGTCGGATGATAACACGATAAGTTCTTGGAAACATCCATCGATATCGATTCC
TTCATCGATCTTGTCACGGGTGAGGGAGCTTGATGAGATACATGCTCAAATTCCTCCTCCAAATCACAGCCAGGGGATGTTGGGTGCAGGAGTTAGTGGGAGAAGTATGC
ATGAGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCAGATGAGGCAGAGAAGACTTTGGCGATGAAGCAAACAACTTTTGGGTGTGCGTCGGATGATAACACGATAAGTTCTTGGAAACATCCATCGATATCGATTCC
TTCATCGATCTTGTCACGGGTGAGGGAGCTTGATGAGATACATGCTCAAATTCCTCCTCCAAATCACAGCCAGGGGATGTTGGGTGCAGGAGTTAGTGGGAGAAGTATGC
ATGAGAGATGA
Protein sequenceShow/hide protein sequence
MDADEAEKTLAMKQTTFGCASDDNTISSWKHPSISIPSSILSRVRELDEIHAQIPPPNHSQGMLGAGVSGRSMHER