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CmoCh17G006870 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G006870
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein of unknown function (DUF3511)
Genome locationCmo_Chr17:7021151..7022342
RNA-Seq ExpressionCmoCh17G006870
SyntenyCmoCh17G006870
Gene Ontology termsNA
InterPro domainsIPR021899 - Protein of unknown function DUF3511


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141806.1 uncharacterized protein LOC101209615 [Cucumis sativus]2.7e-5092.24Show/hide
Query:  MEDFRSKSCREGRMQIESYTENKAAPTNMQDLRSYSVSYAGSV-QNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKS
        MEDFRSKSCRE RMQIE Y EN+ APTNMQDLRSYSVSYA SV QNQSNKEVKMKKGKSN+GS+SKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKS
Subjt:  MEDFRSKSCREGRMQIESYTENKAAPTNMQDLRSYSVSYAGSV-QNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKS

Query:  FRWIKNTYTQVVYGWR
        FRWIKNTYTQVVYGWR
Subjt:  FRWIKNTYTQVVYGWR

XP_022953831.1 uncharacterized protein LOC111456246 [Cucurbita moschata]4.2e-56100Show/hide
Query:  MEDFRSKSCREGRMQIESYTENKAAPTNMQDLRSYSVSYAGSVQNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKSF
        MEDFRSKSCREGRMQIESYTENKAAPTNMQDLRSYSVSYAGSVQNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKSF
Subjt:  MEDFRSKSCREGRMQIESYTENKAAPTNMQDLRSYSVSYAGSVQNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKSF

Query:  RWIKNTYTQVVYGWR
        RWIKNTYTQVVYGWR
Subjt:  RWIKNTYTQVVYGWR

XP_022964102.1 uncharacterized protein LOC111464234 [Cucurbita moschata]7.7e-5089.83Show/hide
Query:  MEDFRSKSCREGRMQIESYTENKAAPTNMQDLRSYSVSYAGSV---QNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLR
        MEDFRSKSCREGRMQIESY ENKAAPTNMQDLRSYSVSYAGSV   QNQ +KE+KMKK KSN+GS+SKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLR
Subjt:  MEDFRSKSCREGRMQIESYTENKAAPTNMQDLRSYSVSYAGSV---QNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLR

Query:  KSFRWIKNTYTQVVYGWR
        KSFRWIKNTYT V+YGWR
Subjt:  KSFRWIKNTYTQVVYGWR

XP_022992449.1 uncharacterized protein LOC111488749 [Cucurbita maxima]1.2e-5599.13Show/hide
Query:  MEDFRSKSCREGRMQIESYTENKAAPTNMQDLRSYSVSYAGSVQNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKSF
        MEDFRSKSCREGRMQIESYTENKAAPTNMQDLRSYSVSY GSVQNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKSF
Subjt:  MEDFRSKSCREGRMQIESYTENKAAPTNMQDLRSYSVSYAGSVQNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKSF

Query:  RWIKNTYTQVVYGWR
        RWIKNTYTQVVYGWR
Subjt:  RWIKNTYTQVVYGWR

XP_023513621.1 uncharacterized protein LOC111778170 [Cucurbita pepo subsp. pepo]2.9e-4986.18Show/hide
Query:  MEDFRSKSCREGRMQIESYTENKAAPTNMQDLRSYSVSYAGSV--------QNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKM
        MEDFRSKSCREGRMQIESY ENKAAPTNMQDLRSYSVSYAGSV        QNQ +KE+KMKK KSN+GS+SKSWSFKDPELQRKTRVAGYKVYAVEGKM
Subjt:  MEDFRSKSCREGRMQIESYTENKAAPTNMQDLRSYSVSYAGSV--------QNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKM

Query:  KGSLRKSFRWIKNTYTQVVYGWR
        KGSLRKSFRWIKNTYT V+YGWR
Subjt:  KGSLRKSFRWIKNTYTQVVYGWR

TrEMBL top hitse value%identityAlignment
A0A0A0K758 Uncharacterized protein1.3e-5092.24Show/hide
Query:  MEDFRSKSCREGRMQIESYTENKAAPTNMQDLRSYSVSYAGSV-QNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKS
        MEDFRSKSCRE RMQIE Y EN+ APTNMQDLRSYSVSYA SV QNQSNKEVKMKKGKSN+GS+SKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKS
Subjt:  MEDFRSKSCREGRMQIESYTENKAAPTNMQDLRSYSVSYAGSV-QNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKS

Query:  FRWIKNTYTQVVYGWR
        FRWIKNTYTQVVYGWR
Subjt:  FRWIKNTYTQVVYGWR

A0A6J1DNJ8 uncharacterized protein LOC1110222821.9e-4990.6Show/hide
Query:  MEDFRSKSCREGRMQIESYTENKAAPTNMQDLRSYSVSYAGSV-QNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKS
        MEDFRSKSCREGRMQIESY ENKAAP++MQDLRSYSVSYA SV QNQ NKEVKMKK KS+IGS+SKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKS
Subjt:  MEDFRSKSCREGRMQIESYTENKAAPTNMQDLRSYSVSYAGSV-QNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKS

Query:  FRWIKNTYTQVVYGWRR
        FRWIKNTYTQ VYGW R
Subjt:  FRWIKNTYTQVVYGWRR

A0A6J1GP67 uncharacterized protein LOC1114562462.0e-56100Show/hide
Query:  MEDFRSKSCREGRMQIESYTENKAAPTNMQDLRSYSVSYAGSVQNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKSF
        MEDFRSKSCREGRMQIESYTENKAAPTNMQDLRSYSVSYAGSVQNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKSF
Subjt:  MEDFRSKSCREGRMQIESYTENKAAPTNMQDLRSYSVSYAGSVQNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKSF

Query:  RWIKNTYTQVVYGWR
        RWIKNTYTQVVYGWR
Subjt:  RWIKNTYTQVVYGWR

A0A6J1HGX0 uncharacterized protein LOC1114642343.7e-5089.83Show/hide
Query:  MEDFRSKSCREGRMQIESYTENKAAPTNMQDLRSYSVSYAGSV---QNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLR
        MEDFRSKSCREGRMQIESY ENKAAPTNMQDLRSYSVSYAGSV   QNQ +KE+KMKK KSN+GS+SKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLR
Subjt:  MEDFRSKSCREGRMQIESYTENKAAPTNMQDLRSYSVSYAGSV---QNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLR

Query:  KSFRWIKNTYTQVVYGWR
        KSFRWIKNTYT V+YGWR
Subjt:  KSFRWIKNTYTQVVYGWR

A0A6J1JXK5 uncharacterized protein LOC1114887496.0e-5699.13Show/hide
Query:  MEDFRSKSCREGRMQIESYTENKAAPTNMQDLRSYSVSYAGSVQNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKSF
        MEDFRSKSCREGRMQIESYTENKAAPTNMQDLRSYSVSY GSVQNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKSF
Subjt:  MEDFRSKSCREGRMQIESYTENKAAPTNMQDLRSYSVSYAGSVQNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKSF

Query:  RWIKNTYTQVVYGWR
        RWIKNTYTQVVYGWR
Subjt:  RWIKNTYTQVVYGWR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G72720.1 Protein of unknown function (DUF3511)1.4e-1239.52Show/hide
Query:  FRSKSCRE--------GRMQIESYTE-NKAAPTNMQD---LRSYSVSYAGSVQNQS--NKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVE
        FRSKSCRE         +    S+ E +++ PTN Q    +RSYS S   + QN +    +   K  +SN           + E+QRK RVA Y VY VE
Subjt:  FRSKSCRE--------GRMQIESYTE-NKAAPTNMQD---LRSYSVSYAGSVQNQS--NKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVE

Query:  GKMKGSLRKSFRWIKNTYTQVVYG
        G++KGS++KSF+W K T +  VYG
Subjt:  GKMKGSLRKSFRWIKNTYTQVVYG

AT2G19460.1 Protein of unknown function (DUF3511)6.4e-1846.9Show/hide
Query:  MEDFRSKSCREGR-MQIESYTENKAAP-------TNMQDLRSYSVSYAGSVQNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKM
        MED+RS+S  +GR   ++ Y+ ++ +          MQDLRSYS SY      +  ++   KKG+S   SSS SW F DP+LQRK RV  Y+ Y VEGK+
Subjt:  MEDFRSKSCREGR-MQIESYTENKAAP-------TNMQDLRSYSVSYAGSVQNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKM

Query:  KGSLRKSFRWIKN
        KGS RKSF+WIK+
Subjt:  KGSLRKSFRWIKN

AT2G47480.1 Protein of unknown function (DUF3511)4.9e-1047.54Show/hide
Query:  KMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKSFRWIKNTYTQVVY
        K+  G+SN  SS +     D E++RK R+A YK Y VEGK+K +L+  FRWIKN   Q+V+
Subjt:  KMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKSFRWIKNTYTQVVY

AT3G13910.1 Protein of unknown function (DUF3511)4.7e-1347.37Show/hide
Query:  SYTENKAAPTNMQDLRSY-SVSYAGSVQNQS---NKEVKMKKGKSNIG---SSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKSFRWIKN
        +Y E  A+      ++ Y S S+  S  +QS   + ++K+KK KS      ++S+SWSF DPE +RK RVAGYKVY+VE KMKGS+RKSF+W K+
Subjt:  SYTENKAAPTNMQDLRSY-SVSYAGSVQNQS---NKEVKMKKGKSNIG---SSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKSFRWIKN

AT5G11970.1 Protein of unknown function (DUF3511)9.5e-2253.04Show/hide
Query:  MEDF-RSKSCREGRMQIESYTENKAAPTNMQDLRSYSVSYAGSVQNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKS
        MEDF R +   +G MQI+ Y  N+       D RSYS SY      + N    +KK KS   + SKSW   DPELQRK RVA YK+Y VEGK+KGS R S
Subjt:  MEDF-RSKSCREGRMQIESYTENKAAPTNMQDLRSYSVSYAGSVQNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKS

Query:  FRWIKNTYTQVVYGW
        FRW+K  YTQVVYGW
Subjt:  FRWIKNTYTQVVYGW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATTTCAGATCCAAATCCTGCAGAGAAGGCAGAATGCAGATTGAAAGCTACACAGAGAACAAGGCTGCCCCAACAAATATGCAAGATCTGAGGTCTTACAGTGT
CAGCTATGCAGGTTCTGTGCAAAATCAATCGAACAAAGAGGTAAAGATGAAGAAAGGCAAAAGCAATATTGGGTCTTCTTCTAAAAGCTGGAGTTTCAAGGACCCAGAAT
TGCAGAGGAAAACGAGGGTCGCTGGTTATAAGGTTTATGCAGTGGAAGGGAAGATGAAAGGGTCTCTGAGAAAGAGTTTCAGATGGATCAAGAACACATACACTCAAGTA
GTGTACGGATGGAGGCGTGCGACCCATCACCTACTAGCAATGGGGGAGAAAAACACTACCGTCAGTACCAAAAACTTGCCCCTTAGTGCCCCAAGACGGGAGTGGGATGG
CCCTACATGCAGGCAACTGCTGCAGCACTAG
mRNA sequenceShow/hide mRNA sequence
CCTTTCCCTGATCTAAAACCACCATAAAAAGGAGACCCAGAAGGCCTTTTTCCTTCCCTTTCCCAATTTAGTCTCTTTGGAGTTTGGGTAATGGAGGATTTCAGATCCAA
ATCCTGCAGAGAAGGCAGAATGCAGATTGAAAGCTACACAGAGAACAAGGCTGCCCCAACAAATATGCAAGATCTGAGGTCTTACAGTGTCAGCTATGCAGGTTCTGTGC
AAAATCAATCGAACAAAGAGGTAAAGATGAAGAAAGGCAAAAGCAATATTGGGTCTTCTTCTAAAAGCTGGAGTTTCAAGGACCCAGAATTGCAGAGGAAAACGAGGGTC
GCTGGTTATAAGGTTTATGCAGTGGAAGGGAAGATGAAAGGGTCTCTGAGAAAGAGTTTCAGATGGATCAAGAACACATACACTCAAGTAGTGTACGGATGGAGGCGTGC
GACCCATCACCTACTAGCAATGGGGGAGAAAAACACTACCGTCAGTACCAAAAACTTGCCCCTTAGTGCCCCAAGACGGGAGTGGGATGGCCCTACATGCAGGCAACTGC
TGCAGCACTAGTTCTACAAAGACAGAACGAAATCTTTCGGTTGGCTTTTCCAACTCTTTCGTGAATCAGAATGAAAGGGATAGAAGCTCAGTATAGAAGGGGTAGAAGCT
CTAGCTTTTAACTACTTACGCCCGCTTATTATTATGACAGAAATGAGCGTGTTATTTTCAAATCGATTGATACATAACCTGATATATTCTAATCGAAAGGTCTCGAGACA
AAGGAAGAGTAAGAAGATGGAACGAATGATTTAGTCTAGAAATGAGAGACAGTTTCACATGGGC
Protein sequenceShow/hide protein sequence
MEDFRSKSCREGRMQIESYTENKAAPTNMQDLRSYSVSYAGSVQNQSNKEVKMKKGKSNIGSSSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKSFRWIKNTYTQV
VYGWRRATHHLLAMGEKNTTVSTKNLPLSAPRREWDGPTCRQLLQH