; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh17G007100 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G007100
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRWD domain-containing protein 1-like
Genome locationCmo_Chr17:7168498..7174570
RNA-Seq ExpressionCmoCh17G007100
SyntenyCmoCh17G007100
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0005844 - polysome (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR006575 - RWD domain
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like
IPR040213 - GIR2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059445.1 RWD domain-containing protein 1 isoform X1 [Cucumis melo var. makuwa]2.3e-4870.91Show/hide
Query:  GVSVKS---DKECDARKRSTSNPITAAMTDYAQEQEMEIDALEAILMDEFKEIHS------------------------------IQLGLIFSHTEKYPD
        GVS+ S       +ARKR   NPITAAMTDYAQEQEMEI+ALEAILMDEFKEIHS                              +QLGLIFSHTEKYPD
Subjt:  GVSVKS---DKECDARKRSTSNPITAAMTDYAQEQEMEIDALEAILMDEFKEIHS------------------------------IQLGLIFSHTEKYPD

Query:  EPPLLNVKSIRGIPVEDLKILREKLQQEASENLGMAMVYTLVTPSKEWLSERFGQESSLEIAEAE
        EPPLLNVKSIRGIP EDLKIL+EKLQQEASENLGMAMVYTLVT SKEWLSERFGQESSLEIAEAE
Subjt:  EPPLLNVKSIRGIPVEDLKILREKLQQEASENLGMAMVYTLVTPSKEWLSERFGQESSLEIAEAE

XP_022992365.1 RWD domain-containing protein 1-like isoform X2 [Cucurbita maxima]7.1e-4576.81Show/hide
Query:  MTDYAQEQEMEIDALEAILMDEFKEIHS------------------------------IQLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQ
        MTDYAQEQEMEIDALEAILMDEFKEIHS                              +QLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQ
Subjt:  MTDYAQEQEMEIDALEAILMDEFKEIHS------------------------------IQLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQ

Query:  EASENLGMAMVYTLVTPSKEWLSERFGQESSLEIAEAE
        EASENLGMAMVYTLVT SKEWLSERFGQESSLEIAEAE
Subjt:  EASENLGMAMVYTLVTPSKEWLSERFGQESSLEIAEAE

XP_022992367.1 RWD domain-containing protein 1-like isoform X3 [Cucurbita maxima]2.3e-4380.47Show/hide
Query:  MTDYAQEQEMEIDALEAILMDEFKEIHSI--------------------QLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQEASENLGMAM
        MTDYAQEQEMEIDALEAILMDEFK   S+                    QLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQEASENLGMAM
Subjt:  MTDYAQEQEMEIDALEAILMDEFKEIHSI--------------------QLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQEASENLGMAM

Query:  VYTLVTPSKEWLSERFGQESSLEIAEAE
        VYTLVT SKEWLSERFGQESSLEIAEAE
Subjt:  VYTLVTPSKEWLSERFGQESSLEIAEAE

XP_023547866.1 RWD domain-containing protein 1-like isoform X1 [Cucurbita pepo subsp. pepo]3.5e-4476.09Show/hide
Query:  MTDYAQEQEMEIDALEAILMDEFKEIHS------------------------------IQLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQ
        MTDYAQEQEMEIDALEAIL DEFKEIHS                              +QLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQ
Subjt:  MTDYAQEQEMEIDALEAILMDEFKEIHS------------------------------IQLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQ

Query:  EASENLGMAMVYTLVTPSKEWLSERFGQESSLEIAEAE
        EASENLGMAMVYTLVT SKEWLSERFGQESSLEIAEAE
Subjt:  EASENLGMAMVYTLVTPSKEWLSERFGQESSLEIAEAE

XP_038898320.1 RWD domain-containing protein 1 isoform X1 [Benincasa hispida]7.8e-4474.64Show/hide
Query:  MTDYAQEQEMEIDALEAILMDEFKEIHS------------------------------IQLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQ
        MTDY QEQEMEI+ALEAILMDEFKEIHS                              +QLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQ
Subjt:  MTDYAQEQEMEIDALEAILMDEFKEIHS------------------------------IQLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQ

Query:  EASENLGMAMVYTLVTPSKEWLSERFGQESSLEIAEAE
        EASENLGMAMVYTLVT SKEWLSERFGQESSLE+AEAE
Subjt:  EASENLGMAMVYTLVTPSKEWLSERFGQESSLEIAEAE

TrEMBL top hitse value%identityAlignment
A0A0A0K775 RWD domain-containing protein1.4e-4374.64Show/hide
Query:  MTDYAQEQEMEIDALEAILMDEFKEIHS------------------------------IQLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQ
        MTDYAQEQEMEI+ALEAILMDEFKEIHS                              +QLGLIFSHTEKYPDEPPLLNVKSIRGIP EDLKIL+EKLQQ
Subjt:  MTDYAQEQEMEIDALEAILMDEFKEIHS------------------------------IQLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQ

Query:  EASENLGMAMVYTLVTPSKEWLSERFGQESSLEIAEAE
        EASENLGMAMVYTLVT SKEWLSERFGQESSLEIAEAE
Subjt:  EASENLGMAMVYTLVTPSKEWLSERFGQESSLEIAEAE

A0A1S3CGU4 RWD domain-containing protein 1 isoform X11.4e-4374.64Show/hide
Query:  MTDYAQEQEMEIDALEAILMDEFKEIHS------------------------------IQLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQ
        MTDYAQEQEMEI+ALEAILMDEFKEIHS                              +QLGLIFSHTEKYPDEPPLLNVKSIRGIP EDLKIL+EKLQQ
Subjt:  MTDYAQEQEMEIDALEAILMDEFKEIHS------------------------------IQLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQ

Query:  EASENLGMAMVYTLVTPSKEWLSERFGQESSLEIAEAE
        EASENLGMAMVYTLVT SKEWLSERFGQESSLEIAEAE
Subjt:  EASENLGMAMVYTLVTPSKEWLSERFGQESSLEIAEAE

A0A5A7V0T4 RWD domain-containing protein 1 isoform X11.1e-4870.91Show/hide
Query:  GVSVKS---DKECDARKRSTSNPITAAMTDYAQEQEMEIDALEAILMDEFKEIHS------------------------------IQLGLIFSHTEKYPD
        GVS+ S       +ARKR   NPITAAMTDYAQEQEMEI+ALEAILMDEFKEIHS                              +QLGLIFSHTEKYPD
Subjt:  GVSVKS---DKECDARKRSTSNPITAAMTDYAQEQEMEIDALEAILMDEFKEIHS------------------------------IQLGLIFSHTEKYPD

Query:  EPPLLNVKSIRGIPVEDLKILREKLQQEASENLGMAMVYTLVTPSKEWLSERFGQESSLEIAEAE
        EPPLLNVKSIRGIP EDLKIL+EKLQQEASENLGMAMVYTLVT SKEWLSERFGQESSLEIAEAE
Subjt:  EPPLLNVKSIRGIPVEDLKILREKLQQEASENLGMAMVYTLVTPSKEWLSERFGQESSLEIAEAE

A0A6J1JPL9 RWD domain-containing protein 1-like isoform X31.1e-4380.47Show/hide
Query:  MTDYAQEQEMEIDALEAILMDEFKEIHSI--------------------QLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQEASENLGMAM
        MTDYAQEQEMEIDALEAILMDEFK   S+                    QLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQEASENLGMAM
Subjt:  MTDYAQEQEMEIDALEAILMDEFKEIHSI--------------------QLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQEASENLGMAM

Query:  VYTLVTPSKEWLSERFGQESSLEIAEAE
        VYTLVT SKEWLSERFGQESSLEIAEAE
Subjt:  VYTLVTPSKEWLSERFGQESSLEIAEAE

A0A6J1JVI2 RWD domain-containing protein 1-like isoform X23.4e-4576.81Show/hide
Query:  MTDYAQEQEMEIDALEAILMDEFKEIHS------------------------------IQLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQ
        MTDYAQEQEMEIDALEAILMDEFKEIHS                              +QLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQ
Subjt:  MTDYAQEQEMEIDALEAILMDEFKEIHS------------------------------IQLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQ

Query:  EASENLGMAMVYTLVTPSKEWLSERFGQESSLEIAEAE
        EASENLGMAMVYTLVT SKEWLSERFGQESSLEIAEAE
Subjt:  EASENLGMAMVYTLVTPSKEWLSERFGQESSLEIAEAE

SwissProt top hitse value%identityAlignment
Q99ND9 RWD domain-containing protein 13.1e-1136.28Show/hide
Query:  MTDYAQEQEMEIDALEAILMDEFKEI-------------------HSIQLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQEASENLGMAMV
        MTDY +EQ  E++ALE+I  D F  +                    ++Q  L F+++EKYPDE PL  + S   +   D+  + + L  +A ENLGM M+
Subjt:  MTDYAQEQEMEIDALEAILMDEFKEI-------------------HSIQLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQEASENLGMAMV

Query:  YTLVTPSKEWLSE
        +TLVT  +E L+E
Subjt:  YTLVTPSKEWLSE

Q9CQK7 RWD domain-containing protein 13.1e-1136.28Show/hide
Query:  MTDYAQEQEMEIDALEAILMDEFKEI-------------------HSIQLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQEASENLGMAMV
        MTDY +EQ  E++ALE+I  D F  +                    ++Q  L F+++EKYPDE PL  + S   +   D+  + + L  +A ENLGM M+
Subjt:  MTDYAQEQEMEIDALEAILMDEFKEI-------------------HSIQLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQEASENLGMAMV

Query:  YTLVTPSKEWLSE
        +TLVT  +E L+E
Subjt:  YTLVTPSKEWLSE

Q9H446 RWD domain-containing protein 13.1e-1136.28Show/hide
Query:  MTDYAQEQEMEIDALEAILMDEFKEI-------------------HSIQLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQEASENLGMAMV
        MTDY +EQ  E++ALE+I  D F  +                    ++Q  L F+++EKYPDE PL  + S   +   D+  + + L  +A ENLGM M+
Subjt:  MTDYAQEQEMEIDALEAILMDEFKEI-------------------HSIQLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQEASENLGMAMV

Query:  YTLVTPSKEWLSE
        +TLVT  +E L+E
Subjt:  YTLVTPSKEWLSE

Arabidopsis top hitse value%identityAlignment
AT1G51730.1 Ubiquitin-conjugating enzyme family protein1.3e-3658.7Show/hide
Query:  MTDYAQEQEMEIDALEAILMDEFKEIHS------------------------------IQLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQ
        MT+Y QEQEMEI+ALEAILMDEFKEIHS                              +QL L+FSHTE YPDE PLL+VKSIRGI V DL IL+EKL+Q
Subjt:  MTDYAQEQEMEIDALEAILMDEFKEIHS------------------------------IQLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQ

Query:  EASENLGMAMVYTLVTPSKEWLSERFGQESSLEIAEAE
        EASENLGMAM+YTLV+ +K+WLSE +GQ+ + E AE E
Subjt:  EASENLGMAMVYTLVTPSKEWLSERFGQESSLEIAEAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCACGGATCAAAAACCAACCTTTTGGTGGGCGAAGAGAGGGGGTTTCTGTGAAGAGCGATAAAGAGTGCGACGCCAGGAAGAGGAGTACGTCGAATCCAATTAC
AGCAGCCATGACTGACTATGCACAGGAGCAGGAGATGGAAATTGACGCATTGGAAGCTATACTTATGGATGAGTTCAAAGAAATTCACTCAATTCAGCTGGGTTTGATTT
TCTCGCATACAGAGAAATATCCTGATGAACCTCCACTTTTGAATGTGAAAAGTATTAGAGGAATCCCGGTAGAAGACCTAAAGATTTTGAGAGAAAAGCTTCAGCAAGAG
GCATCTGAAAATCTTGGTATGGCTATGGTCTACACACTTGTGACACCATCTAAAGAGTGGCTATCTGAGCGATTTGGTCAAGAAAGTAGCCTCGAGATTGCTGAAGCAGA
ATAA
mRNA sequenceShow/hide mRNA sequence
CGGCGTACCGGATCTCGGAGAAACCAAACAACTCTCCGACAATTCATCGAGGCCCAAAATCTTGCCTGGCCACCACGACCCATTTCGGCGGCGGACCCAAACCAACCCTC
CAACCGATGAATCGATACCCTTGGCCTCGCTAGAACTCCCCATCTCCAAAACCCCCAGAACCCAAAAACCAGGGGAAAATTCCTCGAATGAACCCTTAGCTGTTCATCTT
GAAGCCCAATCAACAGTAATTAAAACCGTCAAAAACCTCCCTCTCACCGAGAAATGCATACAACACTAACACAAAACAACCCCTGGCAGTAACGAGATTAAAGAGAAATG
CATACTTGCATGCGCCAGATAGAAATAATCCGAAATTTAAGCTTCAAAGAAAAGGGTAGAGCAGTTGGAAGATGAGGATTAAAGGGTTTAAGGGAAAAACAAAGATCTAC
AACGAGCTCCAAAATTTAGGACTCTTTTTCAACATTACAACGAAATATTTCGGTGTTCTTTATATGATTTTTCTGTTGATATCATATGTTTATGGGGTTTTCTCTGAAGA
AGCTTGTATGTGGTGTGAAGGGTGTCTAAGCCAGGCGTAAGAGAGATGGGAGCACGGATCAAAAACCAACCTTTTGGTGGGCGAAGAGAGGGGGTTTCTGTGAAGAGCGA
TAAAGAGTGCGACGCCAGGAAGAGGAGTACGTCGAATCCAATTACAGCAGCCATGACTGACTATGCACAGGAGCAGGAGATGGAAATTGACGCATTGGAAGCTATACTTA
TGGATGAGTTCAAAGAAATTCACTCAATTCAGCTGGGTTTGATTTTCTCGCATACAGAGAAATATCCTGATGAACCTCCACTTTTGAATGTGAAAAGTATTAGAGGAATC
CCGGTAGAAGACCTAAAGATTTTGAGAGAAAAGCTTCAGCAAGAGGCATCTGAAAATCTTGGTATGGCTATGGTCTACACACTTGTGACACCATCTAAAGAGTGGCTATC
TGAGCGATTTGGTCAAGAAAGTAGCCTCGAGATTGCTGAAGCAGAATAA
Protein sequenceShow/hide protein sequence
MGARIKNQPFGGRREGVSVKSDKECDARKRSTSNPITAAMTDYAQEQEMEIDALEAILMDEFKEIHSIQLGLIFSHTEKYPDEPPLLNVKSIRGIPVEDLKILREKLQQE
ASENLGMAMVYTLVTPSKEWLSERFGQESSLEIAEAE