; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh17G007570 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G007570
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein THYLAKOID ASSEMBLY 8, chloroplastic
Genome locationCmo_Chr17:7432643..7433326
RNA-Seq ExpressionCmoCh17G007570
SyntenyCmoCh17G007570
Gene Ontology termsGO:0000373 - Group II intron splicing (biological process)
GO:0009658 - chloroplast organization (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044190 - Protein THYLAKOID ASSEMBLY 8-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575527.1 Protein THYLAKOID ASSEMBLY 8, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.7e-10999.07Show/hide
Query:  MAFSLHSTFLKSQIPIPIPISAAATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRC
        MAFSLHSTFLKSQIPIPIPISAAATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRC
Subjt:  MAFSLHSTFLKSQIPIPIPISAAATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRC

Query:  ALALEVFAVVRSEYGADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVL
        ALALEVFAVVRSEYGADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDR IQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVL
Subjt:  ALALEVFAVVRSEYGADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVL

Query:  SKGLRRLGEMEMADEV
        SKGLRRLGEMEMADE+
Subjt:  SKGLRRLGEMEMADEV

KAG7014066.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]9.0e-11699.12Show/hide
Query:  MAFSLHSTFLKSQIPIPIPISAAATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRC
        MAFSLHSTFLKSQIPIPIPISA ATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRC
Subjt:  MAFSLHSTFLKSQIPIPIPISAAATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRC

Query:  ALALEVFAVVRSEYGADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVL
        ALALEVFAVVRSEYGADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDR IQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVL
Subjt:  ALALEVFAVVRSEYGADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVL

Query:  SKGLRRLGEMEMADEVNMQFQDLVGSF
        SKGLRRLGEMEMADEVNMQFQDLVGSF
Subjt:  SKGLRRLGEMEMADEVNMQFQDLVGSF

XP_022954347.1 protein THYLAKOID ASSEMBLY 8, chloroplastic [Cucurbita moschata]1.1e-116100Show/hide
Query:  MAFSLHSTFLKSQIPIPIPISAAATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRC
        MAFSLHSTFLKSQIPIPIPISAAATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRC
Subjt:  MAFSLHSTFLKSQIPIPIPISAAATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRC

Query:  ALALEVFAVVRSEYGADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVL
        ALALEVFAVVRSEYGADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVL
Subjt:  ALALEVFAVVRSEYGADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVL

Query:  SKGLRRLGEMEMADEVNMQFQDLVGSF
        SKGLRRLGEMEMADEVNMQFQDLVGSF
Subjt:  SKGLRRLGEMEMADEVNMQFQDLVGSF

XP_022992386.1 protein THYLAKOID ASSEMBLY 8, chloroplastic [Cucurbita maxima]5.9e-11598.24Show/hide
Query:  MAFSLHSTFLKSQIPIPIPISAAATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRC
        MAFSLHSTFLKSQIPIPIPISA ATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRC
Subjt:  MAFSLHSTFLKSQIPIPIPISAAATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRC

Query:  ALALEVFAVVRSEYGADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVL
        ALALEVFAVVRSEYG DLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDY VRVL
Subjt:  ALALEVFAVVRSEYGADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVL

Query:  SKGLRRLGEMEMADEVNMQFQDLVGSF
        SKGLRRLGEMEMADE+NMQFQDLVGSF
Subjt:  SKGLRRLGEMEMADEVNMQFQDLVGSF

XP_023522652.1 protein THYLAKOID ASSEMBLY 8, chloroplastic-like [Cucurbita pepo subsp. pepo]4.5e-11598.68Show/hide
Query:  MAFSLHSTFLKSQIPIPIPISAAATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRC
        MAFSLHSTFLKSQIPIPIPISA ATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRC
Subjt:  MAFSLHSTFLKSQIPIPIPISAAATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRC

Query:  ALALEVFAVVRSEYGADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVL
        ALALEVFAVVRSEYGADLGMYAEVAAALSRNGA EEIDRLVCDLEDEDR IQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVL
Subjt:  ALALEVFAVVRSEYGADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVL

Query:  SKGLRRLGEMEMADEVNMQFQDLVGSF
        SKGLRRLGEMEMADEVNMQFQDLVGSF
Subjt:  SKGLRRLGEMEMADEVNMQFQDLVGSF

TrEMBL top hitse value%identityAlignment
A0A0A0K6N6 Uncharacterized protein9.8e-9281.3Show/hide
Query:  MAFSLHSTFLKSQIPIPIPISAAAT-VVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDR
        MA SLHSTFLKSQI IPIP S A + V VS  VRCGPRDNRGPLVKGRTLS EAIQAIQSLKRAE+SDPTKL+QVLSTTLSRLLKADLVATLKELLRQ+R
Subjt:  MAFSLHSTFLKSQIPIPIPISAAAT-VVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDR

Query:  CALALEVFAVVRSEYGADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQC--DDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTV
        CALALEVFAV++SEY A+LG+YAEVAAALSRNGA EEIDRLV DL+  D VI+   DDKGLIKLIKAVI G+RRESTVRIYRMM+R GWGS IKADDY +
Subjt:  CALALEVFAVVRSEYGADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQC--DDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTV

Query:  RVLSKGLRRLGEMEMADEVNMQFQDLVGSF
        +VLSKGLRRLGE+E+ADE+N +F+DLVGSF
Subjt:  RVLSKGLRRLGEMEMADEVNMQFQDLVGSF

A0A1S3CGD3 uncharacterized protein LOC1035005971.5e-9281.66Show/hide
Query:  MAFSLHSTFLKSQIPIPIPIS-AAATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDR
        MA SLHSTFLKSQI IPIP S A A V VS  VRCGPRDNRGPLVKGRTLS EAIQAIQSLKRAE+SDPTKL+QVLSTTLSRLLKADLVATLKELLRQ+R
Subjt:  MAFSLHSTFLKSQIPIPIPIS-AAATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDR

Query:  CALALEVFAVVRSEYGADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQC--DDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTV
        CALALEVFAV+RSEY A+LG+YAEVAAALSRNGA EEIDRLVCDL+  D VI+   DDKGLIKLIKAVI G+RRESTVRIYRMM+R+GWGS IK DDY +
Subjt:  CALALEVFAVVRSEYGADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQC--DDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTV

Query:  RVLSKGLRRLGEMEMADEVNMQFQDLVGS
        +V+SKGLRR+GE+E+ADE+N +FQDLVGS
Subjt:  RVLSKGLRRLGEMEMADEVNMQFQDLVGS

A0A5A7V0E2 Uncharacterized protein9.8e-9281.22Show/hide
Query:  MAFSLHSTFLKSQIPIPIPIS-AAATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDR
        MA SL STFLKSQI IPIP S A A V VS  VRCGPRDNRGPLVKGRTLS EAIQAIQSLKRAE+SDPTKL+QVLSTTLSRLLKADLVATLKELLRQ+R
Subjt:  MAFSLHSTFLKSQIPIPIPIS-AAATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDR

Query:  CALALEVFAVVRSEYGADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQC--DDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTV
        CALALEVFAV+RSEY A+LG+YAEVAAALSRNGA EEIDRLVCDL+  D VI+   DDKGLIKLIKAVI G+RRESTVRIYRMM+R+GWGS IK DDY +
Subjt:  CALALEVFAVVRSEYGADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQC--DDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTV

Query:  RVLSKGLRRLGEMEMADEVNMQFQDLVGS
        +V+SKGLRR+GE+E+ADE+N +FQDLVGS
Subjt:  RVLSKGLRRLGEMEMADEVNMQFQDLVGS

A0A6J1GQS0 protein THYLAKOID ASSEMBLY 8, chloroplastic5.2e-117100Show/hide
Query:  MAFSLHSTFLKSQIPIPIPISAAATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRC
        MAFSLHSTFLKSQIPIPIPISAAATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRC
Subjt:  MAFSLHSTFLKSQIPIPIPISAAATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRC

Query:  ALALEVFAVVRSEYGADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVL
        ALALEVFAVVRSEYGADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVL
Subjt:  ALALEVFAVVRSEYGADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVL

Query:  SKGLRRLGEMEMADEVNMQFQDLVGSF
        SKGLRRLGEMEMADEVNMQFQDLVGSF
Subjt:  SKGLRRLGEMEMADEVNMQFQDLVGSF

A0A6J1JTE8 protein THYLAKOID ASSEMBLY 8, chloroplastic2.8e-11598.24Show/hide
Query:  MAFSLHSTFLKSQIPIPIPISAAATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRC
        MAFSLHSTFLKSQIPIPIPISA ATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRC
Subjt:  MAFSLHSTFLKSQIPIPIPISAAATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRC

Query:  ALALEVFAVVRSEYGADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVL
        ALALEVFAVVRSEYG DLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDY VRVL
Subjt:  ALALEVFAVVRSEYGADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVL

Query:  SKGLRRLGEMEMADEVNMQFQDLVGSF
        SKGLRRLGEMEMADE+NMQFQDLVGSF
Subjt:  SKGLRRLGEMEMADEVNMQFQDLVGSF

SwissProt top hitse value%identityAlignment
Q1PFH7 Pentatricopeptide repeat-containing protein At1g623502.5e-0727.68Show/hide
Query:  LSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRCALALEVFAVVRSE--YGADLGMYAEVAAALSRNGAMEEIDRLVCDLED
        +S E + A + LKR + +   +L++ + + +SRLLK+DLV+ L E  RQ++  L ++++ VVR E  Y  D+  Y ++   L+RN  ++E  ++  DL+ 
Subjt:  LSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRCALALEVFAVVRSE--YGADLGMYAEVAAALSRNGAMEEIDRLVCDLED

Query:  EDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVLSKGLRRLGEMEMADEVNMQFQDL
        E+  +  D      L++  +  +     +R+Y  M+     S  +      RV+ KGL  +   E+ ++V   F +L
Subjt:  EDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVLSKGLRRLGEMEMADEVNMQFQDL

Q9LVW6 Protein THYLAKOID ASSEMBLY 8, chloroplastic2.7e-4650.47Show/hide
Query:  PIPISAAATVVVSLP------VRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTT---LSRLLKADLVATLKELLRQDRCALALEVF
        P  +S + T+ V +P      +RCGPRDNRGPL+KGR LSTEAIQ+IQSLKRA ++  +     LS T   L RL+K+DL++ L+ELLRQD C LA+ V 
Subjt:  PIPISAAATVVVSLP------VRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTT---LSRLLKADLVATLKELLRQDRCALALEVF

Query:  AVVRSEY-GADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGS-TIKADDYTVRVLSKGLR
        + +R+EY   DL +YA++  AL+RN   +EIDRL+ +++  D+  + DDK L KLI+AV+G +RRES VR+Y +M+ SGWGS + +AD+Y   VLSKGL 
Subjt:  AVVRSEY-GADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGS-TIKADDYTVRVLSKGLR

Query:  RLGEMEMADEVNMQ
        RLGE ++A +V+++
Subjt:  RLGEMEMADEVNMQ

Q9STF9 Protein THYLAKOID ASSEMBLY 8-like, chloroplastic2.0e-0929.95Show/hide
Query:  RGPLVKGRTL-STEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRCALALEVFAVVRSE--YGADLGMYAEVAAALSRNGAMEE
        RGPL +G+ L   EA+  I  LKR  K D  KL++ + T + RLLK D++A + EL RQ+  ALA+++F V++ +  Y  D+ MY ++  +L+++  M+E
Subjt:  RGPLVKGRTL-STEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRCALALEVFAVVRSE--YGADLGMYAEVAAALSRNGAMEE

Query:  IDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVLSKGLRRLGEMEMADEVNMQFQDL
           L   ++ E+  +  D +   ++I+  +        + +Y  M +    S    ++   RVL KGL  L    + ++V   F++L
Subjt:  IDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVLSKGLRRLGEMEMADEVNMQFQDL

Arabidopsis top hitse value%identityAlignment
AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein1.8e-0827.68Show/hide
Query:  LSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRCALALEVFAVVRSE--YGADLGMYAEVAAALSRNGAMEEIDRLVCDLED
        +S E + A + LKR + +   +L++ + + +SRLLK+DLV+ L E  RQ++  L ++++ VVR E  Y  D+  Y ++   L+RN  ++E  ++  DL+ 
Subjt:  LSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRCALALEVFAVVRSE--YGADLGMYAEVAAALSRNGAMEEIDRLVCDLED

Query:  EDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVLSKGLRRLGEMEMADEVNMQFQDL
        E+  +  D      L++  +  +     +R+Y  M+     S  +      RV+ KGL  +   E+ ++V   F +L
Subjt:  EDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVLSKGLRRLGEMEMADEVNMQFQDL

AT3G27750.1 FUNCTIONS IN: molecular_function unknown1.9e-4750.47Show/hide
Query:  PIPISAAATVVVSLP------VRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTT---LSRLLKADLVATLKELLRQDRCALALEVF
        P  +S + T+ V +P      +RCGPRDNRGPL+KGR LSTEAIQ+IQSLKRA ++  +     LS T   L RL+K+DL++ L+ELLRQD C LA+ V 
Subjt:  PIPISAAATVVVSLP------VRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTT---LSRLLKADLVATLKELLRQDRCALALEVF

Query:  AVVRSEY-GADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGS-TIKADDYTVRVLSKGLR
        + +R+EY   DL +YA++  AL+RN   +EIDRL+ +++  D+  + DDK L KLI+AV+G +RRES VR+Y +M+ SGWGS + +AD+Y   VLSKGL 
Subjt:  AVVRSEY-GADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGS-TIKADDYTVRVLSKGLR

Query:  RLGEMEMADEVNMQ
        RLGE ++A +V+++
Subjt:  RLGEMEMADEVNMQ

AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein1.4e-1029.95Show/hide
Query:  RGPLVKGRTL-STEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRCALALEVFAVVRSE--YGADLGMYAEVAAALSRNGAMEE
        RGPL +G+ L   EA+  I  LKR  K D  KL++ + T + RLLK D++A + EL RQ+  ALA+++F V++ +  Y  D+ MY ++  +L+++  M+E
Subjt:  RGPLVKGRTL-STEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRCALALEVFAVVRSE--YGADLGMYAEVAAALSRNGAMEE

Query:  IDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVLSKGLRRLGEMEMADEVNMQFQDL
           L   ++ E+  +  D +   ++I+  +        + +Y  M +    S    ++   RVL KGL  L    + ++V   F++L
Subjt:  IDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVLSKGLRRLGEMEMADEVNMQFQDL

AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain7.1e-1832.51Show/hide
Query:  NRGPLVKGRTLSTEAIQAIQSLKRAE--------------KSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRCALALEVFAVVRSE--YGADLGMYA
        NR PL +GR LS EAIQA+Q+LKRA                S    L++V+ +   RLLK D+VA L+ELLRQ+ C+LAL+VF  +R E  Y   + MY 
Subjt:  NRGPLVKGRTLSTEAIQAIQSLKRAE--------------KSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRCALALEVFAVVRSE--YGADLGMYA

Query:  EVAAALSRNGAMEEIDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVLSKGLRRLGEMEMADEVNMQFQD
        ++   ++ N  MEE++ L   ++ E + +  + +    L+  ++     +  +  Y  M+  G+    + D  + RVL  GL   GEM ++  V     +
Subjt:  EVAAALSRNGAMEEIDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVLSKGLRRLGEMEMADEVNMQFQD

Query:  LVG
          G
Subjt:  LVG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTCTCTCTTCACTCCACGTTTCTCAAATCTCAAATCCCGATTCCGATTCCGATCTCCGCCGCCGCCACCGTCGTCGTTTCCCTTCCGGTACGCTGCGGTCCTCG
GGACAACCGAGGACCGCTAGTCAAAGGCAGAACCCTAAGCACCGAAGCAATCCAAGCCATTCAATCTCTAAAACGGGCCGAGAAATCCGACCCGACGAAGCTCGAACAAG
TCCTCTCCACTACGCTCTCCCGATTGCTCAAAGCCGACCTCGTCGCCACCTTAAAGGAGCTCCTCCGGCAGGACCGGTGCGCCCTCGCTTTGGAGGTTTTCGCCGTCGTA
CGATCGGAGTACGGCGCCGATTTAGGGATGTACGCAGAGGTGGCGGCGGCGTTATCGAGGAACGGAGCGATGGAGGAAATCGACCGGTTGGTTTGCGATTTGGAAGATGA
AGATAGGGTGATCCAGTGCGATGATAAGGGTTTGATTAAGTTGATCAAGGCGGTGATTGGTGGGGATAGAAGGGAATCGACGGTGAGGATTTATAGGATGATGAAGAGGA
GCGGTTGGGGATCCACCATTAAAGCCGATGATTATACGGTTAGGGTTTTGAGCAAGGGCTTAAGGAGGCTCGGGGAAATGGAGATGGCCGATGAGGTCAATATGCAATTT
CAAGATTTAGTGGGCAGTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTCTCTCTTCACTCCACGTTTCTCAAATCTCAAATCCCGATTCCGATTCCGATCTCCGCCGCCGCCACCGTCGTCGTTTCCCTTCCGGTACGCTGCGGTCCTCG
GGACAACCGAGGACCGCTAGTCAAAGGCAGAACCCTAAGCACCGAAGCAATCCAAGCCATTCAATCTCTAAAACGGGCCGAGAAATCCGACCCGACGAAGCTCGAACAAG
TCCTCTCCACTACGCTCTCCCGATTGCTCAAAGCCGACCTCGTCGCCACCTTAAAGGAGCTCCTCCGGCAGGACCGGTGCGCCCTCGCTTTGGAGGTTTTCGCCGTCGTA
CGATCGGAGTACGGCGCCGATTTAGGGATGTACGCAGAGGTGGCGGCGGCGTTATCGAGGAACGGAGCGATGGAGGAAATCGACCGGTTGGTTTGCGATTTGGAAGATGA
AGATAGGGTGATCCAGTGCGATGATAAGGGTTTGATTAAGTTGATCAAGGCGGTGATTGGTGGGGATAGAAGGGAATCGACGGTGAGGATTTATAGGATGATGAAGAGGA
GCGGTTGGGGATCCACCATTAAAGCCGATGATTATACGGTTAGGGTTTTGAGCAAGGGCTTAAGGAGGCTCGGGGAAATGGAGATGGCCGATGAGGTCAATATGCAATTT
CAAGATTTAGTGGGCAGTTTTTGA
Protein sequenceShow/hide protein sequence
MAFSLHSTFLKSQIPIPIPISAAATVVVSLPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAEKSDPTKLEQVLSTTLSRLLKADLVATLKELLRQDRCALALEVFAVV
RSEYGADLGMYAEVAAALSRNGAMEEIDRLVCDLEDEDRVIQCDDKGLIKLIKAVIGGDRRESTVRIYRMMKRSGWGSTIKADDYTVRVLSKGLRRLGEMEMADEVNMQF
QDLVGSF