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CmoCh17G007880 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G007880
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionthionin-like protein 2
Genome locationCmo_Chr17:7584254..7584973
RNA-Seq ExpressionCmoCh17G007880
SyntenyCmoCh17G007880
Gene Ontology termsNA
InterPro domainsIPR038975 - Thionin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575552.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]1.6e-4696.77Show/hide
Query:  GRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASVPMNFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDSCAGTCIKA
        GRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIAS PM+FNHM+THYFCKLGCATSMCTKFSTKNDPSEKKVERCVDSCAGTCIKA
Subjt:  GRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASVPMNFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDSCAGTCIKA

KAG6593441.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]2.4e-4275.93Show/hide
Query:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASVPMNFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS
        MKS+V+ICFILSL+AGRSTASF KCYAKCFI CAITPG+ +GTCG  CLA CLF AS P + NH++THYFCKLGCATS+CTKFSTK DP+EKKVE CV+S
Subjt:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASVPMNFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS

Query:  CAGTCIKA
        C+ TC+KA
Subjt:  CAGTCIKA

KAG7014098.1 Thionin-like protein 2 [Cucurbita argyrosperma subsp. argyrosperma]1.6e-5498.15Show/hide
Query:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASVPMNFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS
        MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIAS PM+FNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS
Subjt:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASVPMNFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS

Query:  CAGTCIKA
        CAGTCIKA
Subjt:  CAGTCIKA

XP_023000407.1 thionin-like protein 2 [Cucurbita maxima]4.9e-4376.85Show/hide
Query:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASVPMNFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS
        MKSVV+ICFILSL+AGRSTASF KCYAKCFI CAITPG+ +GTCG  CLA CLF+AS P + NH++THYFCKLGCATS+CTKFSTK DP+EKKVE CV+S
Subjt:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASVPMNFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS

Query:  CAGTCIKA
        C+ TC+KA
Subjt:  CAGTCIKA

XP_038899787.1 thionin-like protein 2 [Benincasa hispida]2.8e-4376.85Show/hide
Query:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASVPMNFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS
        MKSV++ICFI+SL+ GRSTASF KCYAKCF+ CAITPGI +GTCGA CL  CLFIAS P++FNH++THYFCKLGCATS+CTKFSTK DP+EKKVE CV+S
Subjt:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASVPMNFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS

Query:  CAGTCIKA
        C  TCIKA
Subjt:  CAGTCIKA

TrEMBL top hitse value%identityAlignment
A0A0A0KC18 Uncharacterized protein8.1e-3681.52Show/hide
Query:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASVPMNFNHMNTHYFCKLGCATSMCTKFSTKNDPSEK
        MKSVV+ICFILSL+AGRSTASF KCYAKCFI CAITPGI +GTCGA CLA CLFIAS PM+ N+M+THYFCKLGCATS CTKFSTK DP +K
Subjt:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASVPMNFNHMNTHYFCKLGCATSMCTKFSTKNDPSEK

A0A1Q3BXG2 Uncharacterized protein2.1e-2349.53Show/hide
Query:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASVPMNFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS
        +KS++++C +L L+ G+STASF++CY  CFI C I    ++ +C A CL  C+F +S  ++    +T Y+CKLGCATS+CT  STK DP E+KVE CVDS
Subjt:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASVPMNFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS

Query:  CAGTCIK
        C+  CI+
Subjt:  CAGTCIK

A0A6J1DDL8 thionin-like protein 22.7e-3164.49Show/hide
Query:  VVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLF-IASVPMNFN-HMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDSC
        ++++  +LSL+AG+STASF KCYAKCF+ CAITPGI +GTC A CL  CLF  AS   +FN  ++T YFCKLGCATS+CTKFSTK DP+EKKV  CVDSC
Subjt:  VVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLF-IASVPMNFN-HMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDSC

Query:  AGTCIKA
        +  CI A
Subjt:  AGTCIKA

A0A6J1KDK0 thionin-like protein 22.4e-4376.85Show/hide
Query:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASVPMNFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS
        MKSVV+ICFILSL+AGRSTASF KCYAKCFI CAITPG+ +GTCG  CLA CLF+AS P + NH++THYFCKLGCATS+CTKFSTK DP+EKKVE CV+S
Subjt:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASVPMNFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS

Query:  CAGTCIKA
        C+ TC+KA
Subjt:  CAGTCIKA

A0A6P5XB41 thionin-like protein 23.0e-2252.38Show/hide
Query:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASVPMNFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS
        M SV+++C +L L+ G+STASF+ CY  CF+ C  TPG +  +C   CL KC    + P   N  +T YFCKLGC+TSMCT  S+K DP E KVE CVDS
Subjt:  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASVPMNFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDS

Query:  CAGTC
        C+ TC
Subjt:  CAGTC

SwissProt top hitse value%identityAlignment
A8MRP4 Thionin-like protein 24.8e-0935.45Show/hide
Query:  SVVIICFILSLMAGRSTAS--FRKCYAKCFIAC-AITPGITLGTCGATCLAKCLFIASVP-MNFNHMN-THYFCKLGCATSMCTKFSTKNDPSEKKVERC
        +V+I+  I +L+A  +     F++CY  C + C A +       C  TC  +CL   S P ++ N+++ + YFCKLGCAT  C   S+  +P+ ++V  C
Subjt:  SVVIICFILSLMAGRSTAS--FRKCYAKCFIAC-AITPGITLGTCGATCLAKCLFIASVP-MNFNHMN-THYFCKLGCATSMCTKFSTKNDPSEKKVERC

Query:  VDSCAGTCIK
        VDSC+  C K
Subjt:  VDSCAGTCIK

Arabidopsis top hitse value%identityAlignment
AT1G12663.1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.3.4e-1035.45Show/hide
Query:  SVVIICFILSLMAGRSTAS--FRKCYAKCFIAC-AITPGITLGTCGATCLAKCLFIASVP-MNFNHMN-THYFCKLGCATSMCTKFSTKNDPSEKKVERC
        +V+I+  I +L+A  +     F++CY  C + C A +       C  TC  +CL   S P ++ N+++ + YFCKLGCAT  C   S+  +P+ ++V  C
Subjt:  SVVIICFILSLMAGRSTAS--FRKCYAKCFIAC-AITPGITLGTCGATCLAKCLFIASVP-MNFNHMN-THYFCKLGCATSMCTKFSTKNDPSEKKVERC

Query:  VDSCAGTCIK
        VDSC+  C K
Subjt:  VDSCAGTCIK

AT1G12672.1 unknown protein3.3e-0548.65Show/hide
Query:  YFCKLGCATSMCTKFSTKNDPSEKKVERCVDSCAGTC
        Y+CKLGC+T  C   S+  +P+  KV  CVDSC+  C
Subjt:  YFCKLGCATSMCTKFSTKNDPSEKKVERCVDSCAGTC

AT1G12672.2 unknown protein1.7e-0639.34Show/hide
Query:  TCLAKCLFIASVPMNFNHMNTH--YFCKLGCATSMCTKFSTKNDPSEKKVERCVDSCAGTC
        +C+  CL   S  M+  +   H  Y+CKLGC+T  C   S+  +P+  KV  CVDSC+  C
Subjt:  TCLAKCLFIASVPMNFNHMNTH--YFCKLGCATSMCTKFSTKNDPSEKKVERCVDSCAGTC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTCAGTTGTTATAATTTGCTTCATTCTGAGCTTAATGGCAGGAAGGTCCACAGCGTCCTTTAGGAAGTGCTACGCCAAGTGCTTCATAGCGTGTGCTATCACACC
AGGCATCACCCTTGGCACCTGCGGTGCAACGTGCTTGGCGAAGTGCCTGTTCATTGCATCAGTCCCAATGAATTTCAACCATATGAACACTCATTACTTCTGCAAACTTG
GGTGTGCCACTTCCATGTGCACCAAATTCAGCACCAAGAACGACCCATCTGAGAAGAAAGTGGAAAGGTGTGTGGACTCGTGCGCTGGAACATGCATCAAAGCTTAG
mRNA sequenceShow/hide mRNA sequence
TTTTCCTACTGCTTATTTTCCACAAGCCAAGTGGTTATTTAAGAACAACCACTCTTCCCCAAAGCTTCACATTGAAGAGTGAGTGAAAATGAAGTCAGTTGTTATAATTT
GCTTCATTCTGAGCTTAATGGCAGGAAGGTCCACAGCGTCCTTTAGGAAGTGCTACGCCAAGTGCTTCATAGCGTGTGCTATCACACCAGGCATCACCCTTGGCACCTGC
GGTGCAACGTGCTTGGCGAAGTGCCTGTTCATTGCATCAGTCCCAATGAATTTCAACCATATGAACACTCATTACTTCTGCAAACTTGGGTGTGCCACTTCCATGTGCAC
CAAATTCAGCACCAAGAACGACCCATCTGAGAAGAAAGTGGAAAGGTGTGTGGACTCGTGCGCTGGAACATGCATCAAAGCTTAGAATGCAGAAACATGAAGAAGGGAGG
AGAAGGAGCTGGGATTGGCCTTAACACCATCAATAAATAAACATAATTTGGTGTATGCATGGTTTCATGGTTTCAAGTTTGTGCATGATATATGAGAATGATGTGTTACC
TGGAACCATAAAAACTTATTAGATACAAAATTAAAAGTTTTAAAAATCTATTAAAATTTGATCTCAACGTTGAGAGACTAAACAAAGC
Protein sequenceShow/hide protein sequence
MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASVPMNFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDSCAGTCIKA