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CmoCh17G007900 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G007900
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionthionin-like protein 2
Genome locationCmo_Chr17:7592320..7592766
RNA-Seq ExpressionCmoCh17G007900
SyntenyCmoCh17G007900
Gene Ontology termsNA
InterPro domainsIPR038975 - Thionin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575558.1 hypothetical protein SDJN03_26197, partial [Cucurbita argyrosperma subsp. sororia]1.8e-5185.37Show/hide
Query:  MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN
        MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDD HRQQKNQFFCELGCAASSCTKFSTHQN
Subjt:  MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN

Query:  PA----EKKVG--SCVDSCSRTC
        P      + VG  +C   C  +C
Subjt:  PA----EKKVG--SCVDSCSRTC

KAG7014099.1 hypothetical protein SDJN02_24272, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-5297.14Show/hide
Query:  MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN
        MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN
Subjt:  MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN

Query:  PAEKK
        P   K
Subjt:  PAEKK

XP_022953260.1 thionin-like protein 2 [Cucurbita moschata]1.6e-63100Show/hide
Query:  MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN
        MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN
Subjt:  MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN

Query:  PAEKKVGSCVDSCSRTCSMD
        PAEKKVGSCVDSCSRTCSMD
Subjt:  PAEKKVGSCVDSCSRTCSMD

XP_022992447.1 thionin-like protein 2 [Cucurbita maxima]1.1e-5996.67Show/hide
Query:  MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN
        MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCF+ICAITPGVAFSDCPLRCLQACIIPSFPIHNAAA DDVHRQQKNQFFCELGCAASSCTKFST +N
Subjt:  MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN

Query:  PAEKKVGSCVDSCSRTCSMD
        PAEKKVGSCVDSCSRTCSMD
Subjt:  PAEKKVGSCVDSCSRTCSMD

XP_023547567.1 thionin-like protein 2 [Cucurbita pepo subsp. pepo]2.2e-6097.5Show/hide
Query:  MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN
        MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAA DDVHRQQKNQFFCELGCA SSCTKFSTHQN
Subjt:  MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN

Query:  PAEKKVGSCVDSCSRTCSMD
        PAE KVGSCVDSCSRTCSMD
Subjt:  PAEKKVGSCVDSCSRTCSMD

TrEMBL top hitse value%identityAlignment
A0A0A0K781 Uncharacterized protein2.8e-4580.87Show/hide
Query:  KLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHR-QQKNQFFCELGCAASSCTKFSTHQNPAEKK
        K  LMAWL+L+SL+TANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACI+PSFPI +A   D VHR QQ+N FFC+LGCAASSCTKFST QNP E+K
Subjt:  KLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHR-QQKNQFFCELGCAASSCTKFSTHQNPAEKK

Query:  VGSCVDSCSRTCSMD
        VG CVDSCS+TCSM+
Subjt:  VGSCVDSCSRTCSMD

A0A1S3CDU4 thionin-like protein 24.8e-4580.87Show/hide
Query:  KLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQ-QKNQFFCELGCAASSCTKFSTHQNPAEKK
        K  LMAWL+L+SL+TANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACI+PSFPI +   DD VHRQ Q+N FFC+LGCAASSCTKFST QNP E+K
Subjt:  KLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQ-QKNQFFCELGCAASSCTKFSTHQNPAEKK

Query:  VGSCVDSCSRTCSMD
        V  CVDSCS+TCSMD
Subjt:  VGSCVDSCSRTCSMD

A0A6J1CW29 thionin-like protein 21.8e-3969.05Show/hide
Query:  MESCKAKLGL---MAWLVL--SSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAAD-DDVHRQQKNQFFCELGCAASSCTK
        ME+ + K GL   M WLV+  S +TTA STSFQECYATCFVICAITPG +FS+CPL+CLQACIIPSFPI +AAA      R+  N FFC+LGCAA+ CT 
Subjt:  MESCKAKLGL---MAWLVL--SSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAAD-DDVHRQQKNQFFCELGCAASSCTK

Query:  FSTHQNPAEKKVGSCVDSCSRTCSMD
        F+T+ NPAEKKVG CVDSCSRTCSMD
Subjt:  FSTHQNPAEKKVGSCVDSCSRTCSMD

A0A6J1GMH5 thionin-like protein 27.8e-64100Show/hide
Query:  MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN
        MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN
Subjt:  MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN

Query:  PAEKKVGSCVDSCSRTCSMD
        PAEKKVGSCVDSCSRTCSMD
Subjt:  PAEKKVGSCVDSCSRTCSMD

A0A6J1JZ84 thionin-like protein 25.2e-6096.67Show/hide
Query:  MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN
        MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCF+ICAITPGVAFSDCPLRCLQACIIPSFPIHNAAA DDVHRQQKNQFFCELGCAASSCTKFST +N
Subjt:  MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQN

Query:  PAEKKVGSCVDSCSRTCSMD
        PAEKKVGSCVDSCSRTCSMD
Subjt:  PAEKKVGSCVDSCSRTCSMD

SwissProt top hitse value%identityAlignment
A8MRP4 Thionin-like protein 22.8e-1033.04Show/hide
Query:  LGLMAWLVLSSL---TTANSTSFQECYATCFVIC-AITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQNPAE
        + +M  +V+ +L   T A    F+ECY  C V C A +    +  CP  C + C+    P   ++ + D     ++ +FC+LGCA   C   S+ QNP  
Subjt:  LGLMAWLVLSSL---TTANSTSFQECYATCFVIC-AITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQNPAE

Query:  KKVGSCVDSCSRTCS
        ++V +CVDSCS  C+
Subjt:  KKVGSCVDSCSRTCS

Arabidopsis top hitse value%identityAlignment
AT1G12663.1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.2.0e-1133.04Show/hide
Query:  LGLMAWLVLSSL---TTANSTSFQECYATCFVIC-AITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQNPAE
        + +M  +V+ +L   T A    F+ECY  C V C A +    +  CP  C + C+    P   ++ + D     ++ +FC+LGCA   C   S+ QNP  
Subjt:  LGLMAWLVLSSL---TTANSTSFQECYATCFVIC-AITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQNPAE

Query:  KKVGSCVDSCSRTCS
        ++V +CVDSCS  C+
Subjt:  KKVGSCVDSCSRTCS

AT1G12672.1 unknown protein1.9e-0643.75Show/hide
Query:  DDVHRQQKNQFFCELGCAASSCTKFSTHQNPAEKKVGSCVDSCSRTCS
        D  +    N ++C+LGC+   C   S+ QNP   KV  CVDSCS  CS
Subjt:  DDVHRQQKNQFFCELGCAASSCTKFSTHQNPAEKKVGSCVDSCSRTCS

AT1G12672.2 unknown protein3.0e-0736.36Show/hide
Query:  CLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQNPAEKKVGSCVDSCSRTCS
        C++ C+ P      ++  D  +    N ++C+LGC+   C   S+ QNP   KV  CVDSCS  CS
Subjt:  CLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQNPAEKKVGSCVDSCSRTCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGCTGCAAGGCAAAACTGGGTTTAATGGCGTGGCTGGTGCTGAGCTCATTAACGACGGCGAATTCCACCTCTTTTCAAGAATGCTACGCCACCTGCTTCGTCAT
ATGCGCCATCACGCCCGGCGTCGCCTTCTCCGACTGCCCATTGAGATGCCTCCAAGCCTGCATTATCCCATCTTTTCCTATCCACAACGCCGCCGCCGACGACGACGTCC
ACCGGCAACAAAAGAACCAGTTCTTCTGCGAGCTCGGCTGCGCCGCCTCCTCGTGTACCAAGTTCAGCACCCACCAAAACCCAGCTGAAAAGAAAGTGGGAAGCTGTGTG
GATTCGTGCTCTCGGACATGCTCCATGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGCTGCAAGGCAAAACTGGGTTTAATGGCGTGGCTGGTGCTGAGCTCATTAACGACGGCGAATTCCACCTCTTTTCAAGAATGCTACGCCACCTGCTTCGTCAT
ATGCGCCATCACGCCCGGCGTCGCCTTCTCCGACTGCCCATTGAGATGCCTCCAAGCCTGCATTATCCCATCTTTTCCTATCCACAACGCCGCCGCCGACGACGACGTCC
ACCGGCAACAAAAGAACCAGTTCTTCTGCGAGCTCGGCTGCGCCGCCTCCTCGTGTACCAAGTTCAGCACCCACCAAAACCCAGCTGAAAAGAAAGTGGGAAGCTGTGTG
GATTCGTGCTCTCGGACATGCTCCATGGATTGA
Protein sequenceShow/hide protein sequence
MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQNPAEKKVGSCV
DSCSRTCSMD