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CmoCh17G008140 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G008140
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionlate embryogenesis abundant protein 7
Genome locationCmo_Chr17:7726303..7726968
RNA-Seq ExpressionCmoCh17G008140
SyntenyCmoCh17G008140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575580.1 Geranylgeranyl transferase type-2 subunit beta 1, partial [Cucurbita argyrosperma subsp. sororia]5.2e-4697.17Show/hide
Query:  MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGM
        MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWA+ESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAA+AVKSTFGM
Subjt:  MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGM

Query:  AHDDDV
        AHDDD+
Subjt:  AHDDDV

KAG7014121.1 Late embryogenesis abundant protein 7 [Cucurbita argyrosperma subsp. argyrosperma]8.2e-5296.69Show/hide
Query:  MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGM
        MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAA+AVKSTFGM
Subjt:  MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGM

Query:  AHDDDVGKE--GSDTTTYRRG
        AHDDDVGKE  GSDTTT RRG
Subjt:  AHDDDVGKE--GSDTTTYRRG

XP_022953941.1 late embryogenesis abundant protein 7 [Cucurbita moschata]8.0e-55100Show/hide
Query:  MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGM
        MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGM
Subjt:  MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGM

Query:  AHDDDVGKEGSDTTTYRRG
        AHDDDVGKEGSDTTTYRRG
Subjt:  AHDDDVGKEGSDTTTYRRG

XP_022991581.1 late embryogenesis abundant protein 7-like [Cucurbita maxima]3.7e-4485.71Show/hide
Query:  MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGM
        MASHN+ YK GE+KGRAEEKTSQAMG MGDKAHGAAES KEWA+E KDQTGSYMSD       KAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGM
Subjt:  MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGM

Query:  AHDDDVGKEGSDTTTYRRG
        AHDDDVGKEG+D TTYRRG
Subjt:  AHDDDVGKEGSDTTTYRRG

XP_023548700.1 late embryogenesis abundant protein 7 [Cucurbita pepo subsp. pepo]1.7e-4984.89Show/hide
Query:  MASHNQSYKAGETKGRAEEKTSQAMGTMG------------------DKAHGAAESTKEWAKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEK
        MASHNQSYKAGETKGRAEEKTSQAMGTMG                  DKAHGAAESTKEWAKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEK
Subjt:  MASHNQSYKAGETKGRAEEKTSQAMGTMG------------------DKAHGAAESTKEWAKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEK

Query:  VKSMAQGAADAVKSTFGMAHDDDVGKE--GSDTTTYRRG
        VKSMAQGAA+AVKSTFGMAHDDDVGKE  GSDTTTYRRG
Subjt:  VKSMAQGAADAVKSTFGMAHDDDVGKE--GSDTTTYRRG

TrEMBL top hitse value%identityAlignment
A0A1S3CEC9 late embryogenesis abundant protein D-71.1e-3368.12Show/hide
Query:  MASHNQSYKAGETKGRAEEKTSQAMGTMG------------------DKAHGAAESTKEWAKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEK
        MASHNQSY+AGETKGRAEEKT+QAMGTMG                  DKAHGAA+STKEWA           SD AQA REKAQ+GKETTGGILEQTGEK
Subjt:  MASHNQSYKAGETKGRAEEKTSQAMGTMG------------------DKAHGAAESTKEWAKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEK

Query:  VKSMAQGAADAVKSTFGMA--HDDDVGKEGSDTTTYRR
        VKSMAQGAA+AVKSTFGMA  +DDDV K  +D TTYRR
Subjt:  VKSMAQGAADAVKSTFGMA--HDDDVGKEGSDTTTYRR

A0A5A7UUB6 Late embryogenesis abundant protein D-71.1e-3368.12Show/hide
Query:  MASHNQSYKAGETKGRAEEKTSQAMGTMG------------------DKAHGAAESTKEWAKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEK
        MASHNQSY+AGETKGRAEEKT+QAMGTMG                  DKAHGAA+STKEWA           SD AQA REKAQ+GKETTGGILEQTGEK
Subjt:  MASHNQSYKAGETKGRAEEKTSQAMGTMG------------------DKAHGAAESTKEWAKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEK

Query:  VKSMAQGAADAVKSTFGMA--HDDDVGKEGSDTTTYRR
        VKSMAQGAA+AVKSTFGMA  +DDDV K  +D TTYRR
Subjt:  VKSMAQGAADAVKSTFGMA--HDDDVGKEGSDTTTYRR

A0A6J1D7P2 late embryogenesis abundant protein Dc3-like5.1e-3163.97Show/hide
Query:  MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAEST-------KEWAKESKDQTGSYMSDK-----------AQAAREKAQSGKETTGGILEQTGEK
        MA+H+Q ++AGETKGRAEEKT+Q M TMG+KA    + T       ++ A+ESK+Q+GSY+S+K           AQAAREKAQSGKE TGGILEQTGEK
Subjt:  MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAEST-------KEWAKESKDQTGSYMSDK-----------AQAAREKAQSGKETTGGILEQTGEK

Query:  VKSMAQGAADAVKSTFGMA-HDDDVGKEGSDTTTYR
        VKSMAQGAADAVKSTFGMA HDDDV K+   TT YR
Subjt:  VKSMAQGAADAVKSTFGMA-HDDDVGKEGSDTTTYR

A0A6J1GPH8 late embryogenesis abundant protein 73.9e-55100Show/hide
Query:  MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGM
        MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGM
Subjt:  MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGM

Query:  AHDDDVGKEGSDTTTYRRG
        AHDDDVGKEGSDTTTYRRG
Subjt:  AHDDDVGKEGSDTTTYRRG

A0A6J1JR52 late embryogenesis abundant protein 7-like1.8e-4485.71Show/hide
Query:  MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGM
        MASHN+ YK GE+KGRAEEKTSQAMG MGDKAHGAAES KEWA+E KDQTGSYMSD       KAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGM
Subjt:  MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGM

Query:  AHDDDVGKEGSDTTTYRRG
        AHDDDVGKEG+D TTYRRG
Subjt:  AHDDDVGKEGSDTTTYRRG

SwissProt top hitse value%identityAlignment
O49816 Late embryogenesis abundant protein 12.6e-1640.36Show/hide
Query:  MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKD---QTGSYMSDK----AQAAREK-----------------------------
        MASH+QSYKAGET GR EEKT+Q +G + DKA  A E  ++ A+ +KD   QT     +K    AQAA+EK                             
Subjt:  MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKD---QTGSYMSDK----AQAAREK-----------------------------

Query:  --------------------------AQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGMAHDD
                                  AQSGK+ + G L+QTGEKVK MAQGA DAVK TFGMA+DD
Subjt:  --------------------------AQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGMAHDD

O49817 Late embryogenesis abundant protein 24.0e-1740.28Show/hide
Query:  MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYM----------------------------------------SDKAQA
        M SH+QSY+AGE KGR EEKT+Q +G + DKA  A E  ++ A+ +KD+T                                            S+  Q+
Subjt:  MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYM----------------------------------------SDKAQA

Query:  AREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGMAHDD
         +E AQSGK+ + G L+QTGEK K MAQGA DAVK TFGM +DD
Subjt:  AREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGMAHDD

P13939 Late embryogenesis abundant protein D-77.6e-1647.97Show/hide
Query:  MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQT--------------GSYMSDK----AQAAREKAQSGKETTGGILEQTGEK
        MASH QSYKAG  +GRA EK  Q   +M +KA  A + T E A+ +K +T                  +DK    A AAR KA+  KET+GGIL+Q GEK
Subjt:  MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQT--------------GSYMSDK----AQAAREKAQSGKETTGGILEQTGEK

Query:  VKSMAQGAADAVKSTFGMAHDDD
        V++ AQGA DAVK TFGMA  D+
Subjt:  VKSMAQGAADAVKSTFGMAHDDD

P83442 Late embryogenesis abundant protein Dc31.1e-1746.2Show/hide
Query:  MASH-NQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWA-------KESKDQTGSYMSDK-----------AQAAREK-----------------
        MASH +QSYKAGE KG A+EKT Q   TM DKA  A +   E A        ESKDQTGSY+SDK           AQAA+EK                 
Subjt:  MASH-NQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWA-------KESKDQTGSYMSDK-----------AQAAREK-----------------

Query:  -----AQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGMAHDDDVGKEGSDTTTYR
             A +GKE TGG++    E+VK MAQGA +AVK+TFGMA  D+  K    TTT R
Subjt:  -----AQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGMAHDDDVGKEGSDTTTYR

Q96270 Late embryogenesis abundant protein 76.6e-2045.62Show/hide
Query:  MASH-NQSYKAGETKGRAEEKTSQAMGTMGDKAHG-----------------------------AAESTKEWAKESKDQTGSYMS-----------DKAQ
        MASH  QSYKAGET+G+A+EKT +AMGTMGDK                                AA++T+E A+ESKD+TGSYMS           D A+
Subjt:  MASH-NQSYKAGETKGRAEEKTSQAMGTMGDKAHG-----------------------------AAESTKEWAKESKDQTGSYMS-----------DKAQ

Query:  AAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGMAHD----DDVGKEGSDTTT
          +E A++GKE T GIL QTGE+VK MA GA DAVK T G+  D    + V    S TTT
Subjt:  AAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGMAHD----DDVGKEGSDTTT

Arabidopsis top hitse value%identityAlignment
AT1G52690.1 Late embryogenesis abundant protein (LEA) family protein4.7e-2145.62Show/hide
Query:  MASH-NQSYKAGETKGRAEEKTSQAMGTMGDKAHG-----------------------------AAESTKEWAKESKDQTGSYMS-----------DKAQ
        MASH  QSYKAGET+G+A+EKT +AMGTMGDK                                AA++T+E A+ESKD+TGSYMS           D A+
Subjt:  MASH-NQSYKAGETKGRAEEKTSQAMGTMGDKAHG-----------------------------AAESTKEWAKESKDQTGSYMS-----------DKAQ

Query:  AAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGMAHD----DDVGKEGSDTTT
          +E A++GKE T GIL QTGE+VK MA GA DAVK T G+  D    + V    S TTT
Subjt:  AAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGMAHD----DDVGKEGSDTTT

AT1G52690.2 Late embryogenesis abundant protein (LEA) family protein4.7e-2145.62Show/hide
Query:  MASH-NQSYKAGETKGRAEEKTSQAMGTMGDKAHG-----------------------------AAESTKEWAKESKDQTGSYMS-----------DKAQ
        MASH  QSYKAGET+G+A+EKT +AMGTMGDK                                AA++T+E A+ESKD+TGSYMS           D A+
Subjt:  MASH-NQSYKAGETKGRAEEKTSQAMGTMGDKAHG-----------------------------AAESTKEWAKESKDQTGSYMS-----------DKAQ

Query:  AAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGMAHD----DDVGKEGSDTTT
          +E A++GKE T GIL QTGE+VK MA GA DAVK T G+  D    + V    S TTT
Subjt:  AAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGMAHD----DDVGKEGSDTTT

AT3G15670.1 Late embryogenesis abundant protein (LEA) family protein2.5e-1442.75Show/hide
Query:  KAGETKGRAEEKTSQAMGTMGDKAHGAAESTKE-------WAKESKDQTGSYMSDKAQAAREKAQ----------------------SGKETTGGILEQT
        KA ET   A+EKTSQ   T   KAH   ++ KE        A+E+KD+ GSY+S+  +A + KAQ                      +G++ TGG L QT
Subjt:  KAGETKGRAEEKTSQAMGTMGDKAHGAAESTKE-------WAKESKDQTGSYMSDKAQAAREKAQ----------------------SGKETTGGILEQT

Query:  GEKVKSMAQGAADAVKSTFGMA--HDDDVGKEGSDTTT
        GE VK MA GAADAVK TFGMA   +D     GS TTT
Subjt:  GEKVKSMAQGAADAVKSTFGMA--HDDDVGKEGSDTTT

AT4G13560.1 Late embryogenesis abundant protein (LEA) family protein1.7e-0733.33Show/hide
Query:  QSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSY-------MSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTF
        Q + AG+ +G+A+EK  Q   +    A  A + T +  + ++D+            +D + +A + AQ  +E   G+  QTGE VK+MAQGA D VK++ 
Subjt:  QSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSY-------MSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTF

Query:  GM
        GM
Subjt:  GM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCCCACAATCAGAGCTACAAAGCTGGTGAAACCAAGGGCCGAGCTGAGGAGAAGACTAGTCAGGCGATGGGTACAATGGGGGACAAGGCCCATGGAGCAGCGGA
GTCCACGAAAGAATGGGCCAAGGAGTCCAAAGATCAGACAGGAAGCTATATGTCGGATAAGGCCCAAGCGGCCCGAGAGAAGGCCCAATCTGGGAAGGAGACGACCGGAG
GGATACTGGAGCAGACGGGCGAGAAAGTGAAGAGTATGGCCCAAGGAGCGGCGGATGCTGTGAAAAGCACTTTTGGTATGGCCCACGATGATGACGTGGGCAAGGAGGGG
AGTGACACCACCACTTATCGCAGGGGCTGA
mRNA sequenceShow/hide mRNA sequence
AAAGAAACAAATCTATTTCTAAACAATGGCATCCCACAATCAGAGCTACAAAGCTGGTGAAACCAAGGGCCGAGCTGAGGAGAAGACTAGTCAGGCGATGGGTACAATGG
GGGACAAGGCCCATGGAGCAGCGGAGTCCACGAAAGAATGGGCCAAGGAGTCCAAAGATCAGACAGGAAGCTATATGTCGGATAAGGCCCAAGCGGCCCGAGAGAAGGCC
CAATCTGGGAAGGAGACGACCGGAGGGATACTGGAGCAGACGGGCGAGAAAGTGAAGAGTATGGCCCAAGGAGCGGCGGATGCTGTGAAAAGCACTTTTGGTATGGCCCA
CGATGATGACGTGGGCAAGGAGGGGAGTGACACCACCACTTATCGCAGGGGCTGATTCGTAATTATGTTGTTACTGTTCTGGTTTTTGTTTTTTCTGCATGGTTTGTTGG
TGTTGTGTCGTGTAACATTTCCCTCCCTTTTTGTTGGAGGTGGTGTTTGGTGGTCTGTATTCCAATAAGAACATCCTTTGTCTTTGCTTAGCTCGTATTTTGCTTAGCTC
GTATTATCCAACTCAGATAGAATGAACTTAAGTATTTTAATAATAAATGCAAG
Protein sequenceShow/hide protein sequence
MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGMAHDDDVGKEG
SDTTTYRRG