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CmoCh17G008150 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G008150
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionlate embryogenesis abundant protein 1-like
Genome locationCmo_Chr17:7727882..7728176
RNA-Seq ExpressionCmoCh17G008150
SyntenyCmoCh17G008150
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575581.1 hypothetical protein SDJN03_26220, partial [Cucurbita argyrosperma subsp. sororia]5.0e-17100Show/hide
Query:  MASQQDLSFKAGETVGQAQVKKDEVMSQATSTQDAQSAAQTATDLKDQAASFLQQ
        MASQQDLSFKAGETVGQAQVKKDEVMSQATSTQDAQSAAQTATDLKDQAASFLQQ
Subjt:  MASQQDLSFKAGETVGQAQVKKDEVMSQATSTQDAQSAAQTATDLKDQAASFLQQ

XP_004136082.1 late embryogenesis abundant protein 2 [Cucumis sativus]1.3e-0980Show/hide
Query:  MASQQDLSFKAGETVGQAQVKKDEVMSQATSTQDAQSAAQTATDLKDQAASFLQQ
        MAS QDLS KA E VGQAQVK+DE+M+Q T TQD  SAAQTATDLKDQAASFLQQ
Subjt:  MASQQDLSFKAGETVGQAQVKKDEVMSQATSTQDAQSAAQTATDLKDQAASFLQQ

XP_022954121.1 late embryogenesis abundant protein 1-like [Cucurbita moschata]5.0e-17100Show/hide
Query:  MASQQDLSFKAGETVGQAQVKKDEVMSQATSTQDAQSAAQTATDLKDQAASFLQQ
        MASQQDLSFKAGETVGQAQVKKDEVMSQATSTQDAQSAAQTATDLKDQAASFLQQ
Subjt:  MASQQDLSFKAGETVGQAQVKKDEVMSQATSTQDAQSAAQTATDLKDQAASFLQQ

XP_022991676.1 late embryogenesis abundant protein 1-like [Cucurbita maxima]3.0e-1487.27Show/hide
Query:  MASQQDLSFKAGETVGQAQVKKDEVMSQATSTQDAQSAAQTATDLKDQAASFLQQ
        MASQQDLS+KAGETVGQAQ  KD++MSQ TSTQDAQSAAQTATDLKDQAA+FLQQ
Subjt:  MASQQDLSFKAGETVGQAQVKKDEVMSQATSTQDAQSAAQTATDLKDQAASFLQQ

XP_023548702.1 late embryogenesis abundant protein 1-like [Cucurbita pepo subsp. pepo]4.2e-1698.18Show/hide
Query:  MASQQDLSFKAGETVGQAQVKKDEVMSQATSTQDAQSAAQTATDLKDQAASFLQQ
        MASQQDLS KAGETVGQAQVKKDEVMSQATSTQDAQSAAQTATDLKDQAASFLQQ
Subjt:  MASQQDLSFKAGETVGQAQVKKDEVMSQATSTQDAQSAAQTATDLKDQAASFLQQ

TrEMBL top hitse value%identityAlignment
A0A0A0K8V2 Uncharacterized protein6.4e-1080Show/hide
Query:  MASQQDLSFKAGETVGQAQVKKDEVMSQATSTQDAQSAAQTATDLKDQAASFLQQ
        MAS QDLS KA E VGQAQVK+DE+M+Q T TQD  SAAQTATDLKDQAASFLQQ
Subjt:  MASQQDLSFKAGETVGQAQVKKDEVMSQATSTQDAQSAAQTATDLKDQAASFLQQ

A0A5D3CF20 Late embryogenesis abundant protein 11.0e-0775Show/hide
Query:  MASQQD-LSFKAGETVGQAQVKKDEVMSQATSTQDAQSAAQTATDLKDQAASFLQQ
        MAS QD LS KAGETVGQAQVKKDE+M+Q T+    QSA QTA+DLKDQAA+FLQQ
Subjt:  MASQQD-LSFKAGETVGQAQVKKDEVMSQATSTQDAQSAAQTATDLKDQAASFLQQ

A0A6J1GQ03 late embryogenesis abundant protein 1-like2.4e-17100Show/hide
Query:  MASQQDLSFKAGETVGQAQVKKDEVMSQATSTQDAQSAAQTATDLKDQAASFLQQ
        MASQQDLSFKAGETVGQAQVKKDEVMSQATSTQDAQSAAQTATDLKDQAASFLQQ
Subjt:  MASQQDLSFKAGETVGQAQVKKDEVMSQATSTQDAQSAAQTATDLKDQAASFLQQ

A0A6J1JRF1 late embryogenesis abundant protein 1-like1.5e-1487.27Show/hide
Query:  MASQQDLSFKAGETVGQAQVKKDEVMSQATSTQDAQSAAQTATDLKDQAASFLQQ
        MASQQDLS+KAGETVGQAQ  KD++MSQ TSTQDAQSAAQTATDLKDQAA+FLQQ
Subjt:  MASQQDLSFKAGETVGQAQVKKDEVMSQATSTQDAQSAAQTATDLKDQAASFLQQ

A0A6J1KJU5 late embryogenesis abundant protein 13.5e-0863.64Show/hide
Query:  MASQQDLSFKAGETVGQAQVKKDEVMSQ-----------ATSTQDAQSAAQTATDLKDQAASFLQQ
        MASQQD+S   GE VGQAQVKKDEVM+Q           A++T D  SAAQTA+DLKDQAA+FLQQ
Subjt:  MASQQDLSFKAGETVGQAQVKKDEVMSQ-----------ATSTQDAQSAAQTATDLKDQAASFLQQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGCCAACAGGATTTGAGCTTCAAGGCTGGGGAGACTGTTGGGCAAGCTCAGGTCAAGAAGGATGAGGTTATGAGCCAAGCAACATCCACCCAGGATGCC
CAATCCGCCGCCCAAACTGCCACCGACCTGAAGGACCAAGCTGCCAGCTTCCTCCAACAGGCAAACTGGAGAGCAAGTGAAGAGCATGGCTCAAGGAGCAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGCCAACAGGATTTGAGCTTCAAGGCTGGGGAGACTGTTGGGCAAGCTCAGGTCAAGAAGGATGAGGTTATGAGCCAAGCAACATCCACCCAGGATGCC
CAATCCGCCGCCCAAACTGCCACCGACCTGAAGGACCAAGCTGCCAGCTTCCTCCAACAGGCAAACTGGAGAGCAAGTGAAGAGCATGGCTCAAGGAGCAGCTGA
Protein sequenceShow/hide protein sequence
MASQQDLSFKAGETVGQAQVKKDEVMSQATSTQDAQSAAQTATDLKDQAASFLQQANWRASEEHGSRSS