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CmoCh17G008290 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G008290
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationCmo_Chr17:7781020..7781395
RNA-Seq ExpressionCmoCh17G008290
SyntenyCmoCh17G008290
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575594.1 hypothetical protein SDJN03_26233, partial [Cucurbita argyrosperma subsp. sororia]4.5e-3596.47Show/hide
Query:  MAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAA--VVPVHKMKGKAFNAIASSREEEGS
        MAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAA  VVPVHKMKGKAFNAIASSREEEG+
Subjt:  MAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAA--VVPVHKMKGKAFNAIASSREEEGS
KAG7014136.1 hypothetical protein SDJN02_24309, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-3497.59Show/hide
Query:  MAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAA--VVPVHKMKGKAFNAIASSREEE
        MAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAA  VVPVHKMKGKAFNAIASSREEE
Subjt:  MAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAA--VVPVHKMKGKAFNAIASSREEE
XP_022953925.1 EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucurbita moschata]2.5e-49100Show/hide
Query:  MAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAVVPVHKMKGKAFNAIASSREEEGSYYLLSWKCQCGNKIYQP
        MAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAVVPVHKMKGKAFNAIASSREEEGSYYLLSWKCQCGNKIYQP
Subjt:  MAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAVVPVHKMKGKAFNAIASSREEEGSYYLLSWKCQCGNKIYQP
XP_022991788.1 EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucurbita maxima]1.9e-4696Show/hide
Query:  MAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAVVPVHKMKGKAFNAIASSREEEGSYYLLSWKCQCGNKIYQP
        MAMPFLKLAIVLAVFFFFFS VPPKSVGLVLEANMKIGSRPPGC +KCMSCRPCMAAAAVVPVHKMKGKAFNAIASSREEE SYYLLSWKCQCGNKIYQP
Subjt:  MAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAVVPVHKMKGKAFNAIASSREEEGSYYLLSWKCQCGNKIYQP
XP_023548448.1 EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucurbita pepo subsp. pepo]2.6e-4391.35Show/hide
Query:  MAMPFLKLAIVLAVF---FFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCM-AAAAVVPVHKMKGKAFNAIASSREEEGSYYLLSWKCQCGNK
        MAMPFLKL IVLAVF   FFFFS VPPKSVGL+LE NMKIGSRPPGCVNKCMSCRPCM AAAAVVPVHKMKGKAFNAIASSREE GSYYLLSWKCQCGNK
Subjt:  MAMPFLKLAIVLAVF---FFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCM-AAAAVVPVHKMKGKAFNAIASSREEEGSYYLLSWKCQCGNK

Query:  IYQP
        IYQP
Subjt:  IYQP
TrEMBL top hitse value%identityAlignment
A0A0A0K6C2 Epidermal patterning factor-like protein3.4e-2861.29Show/hide
Query:  MAMPF-----LKLAIVLAVFFFFFSPVPPKSVGLV-------------------LEANMKIGSRPPGCVNKCMSCRPCMAAAAVVPVHKMKGKAFNAIAS
        MA+P      LKLA+ LA FF F   +PP SVGLV                   LE  M IGSRPPGC NKCM+CRPCM AAAVVPVH+MKGKAF + +S
Subjt:  MAMPF-----LKLAIVLAVFFFFFSPVPPKSVGLV-------------------LEANMKIGSRPPGCVNKCMSCRPCMAAAAVVPVHKMKGKAFNAIAS

Query:  SREEEGSYYLLSWKCQCGNKIYQP
        SREEE SYYLLSWKC+CGNKIYQP
Subjt:  SREEEGSYYLLSWKCQCGNKIYQP
A0A1S3CDZ4 Epidermal patterning factor-like protein2.6e-2861.29Show/hide
Query:  MAMPF-----LKLAIVLAVFFFFFSPVPPKSVGLVL-------------------EANMKIGSRPPGCVNKCMSCRPCMAAAAVVPVHKMKGKAFNAIAS
        MA+P      LKLA+ LA FF F   +PP SVGLVL                   +  M IGSRPPGC NKCM+CRPCM AAAVVPVH+MKGKAF + +S
Subjt:  MAMPF-----LKLAIVLAVFFFFFSPVPPKSVGLVL-------------------EANMKIGSRPPGCVNKCMSCRPCMAAAAVVPVHKMKGKAFNAIAS

Query:  SREEEGSYYLLSWKCQCGNKIYQP
        SREEE SYYLLSWKCQCGNKIYQP
Subjt:  SREEEGSYYLLSWKCQCGNKIYQP
A0A5D3CGR2 Epidermal patterning factor-like protein4.4e-2861.29Show/hide
Query:  MAMPF-----LKLAIVLAVFFFFFSPVPPKSVGLVLEAN-------------------MKIGSRPPGCVNKCMSCRPCMAAAAVVPVHKMKGKAFNAIAS
        MA+P      LKLA+ LA FF F   +PP SVGLVL  +                   M IGSRPPGC NKCM+CRPCM AAAVVPVH+MKGKAF + +S
Subjt:  MAMPF-----LKLAIVLAVFFFFFSPVPPKSVGLVLEAN-------------------MKIGSRPPGCVNKCMSCRPCMAAAAVVPVHKMKGKAFNAIAS

Query:  SREEEGSYYLLSWKCQCGNKIYQP
        SREEE SYYLLSWKCQCGNKIYQP
Subjt:  SREEEGSYYLLSWKCQCGNKIYQP
A0A6J1GR07 Epidermal patterning factor-like protein1.2e-49100Show/hide
Query:  MAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAVVPVHKMKGKAFNAIASSREEEGSYYLLSWKCQCGNKIYQP
        MAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAVVPVHKMKGKAFNAIASSREEEGSYYLLSWKCQCGNKIYQP
Subjt:  MAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAVVPVHKMKGKAFNAIASSREEEGSYYLLSWKCQCGNKIYQP
A0A6J1JXA0 Epidermal patterning factor-like protein9.4e-4796Show/hide
Query:  MAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAVVPVHKMKGKAFNAIASSREEEGSYYLLSWKCQCGNKIYQP
        MAMPFLKLAIVLAVFFFFFS VPPKSVGLVLEANMKIGSRPPGC +KCMSCRPCMAAAAVVPVHKMKGKAFNAIASSREEE SYYLLSWKCQCGNKIYQP
Subjt:  MAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAVVPVHKMKGKAFNAIASSREEEGSYYLLSWKCQCGNKIYQP
SwissProt top hitse value%identityAlignment
P43212 Polygalacturonase7.3e-0437.5Show/hide
Query:  IGSRPPGCVNKCMSCRPCMAAAAVVPVHKMKGKAFNAIASSREEEGSYYLLSWKCQCGNKIYQP
        +GSRPP C NKC  C PC   A +V VH++  +              YY   W C    KIY P
Subjt:  IGSRPPGCVNKCMSCRPCMAAAAVVPVHKMKGKAFNAIASSREEEGSYYLLSWKCQCGNKIYQP
Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 11.1e-0425.66Show/hide
Query:  MAMPFLKLAIVLAVFFFFFSPV-PPKSVGLVL-EANMKIGSRPPGCVNKCMSCRPCMA--------AAAVVPVHKMKG---KAFNAIASSREEEGSYYLL
        + +P + + ++      F  P+ PP S  + L E   ++GS PP C N+C +C PCMA         +    V+   G   +  +++ +  ++  +Y  +
Subjt:  MAMPFLKLAIVLAVFFFFFSPV-PPKSVGLVL-EANMKIGSRPPGCVNKCMSCRPCMA--------AAAVVPVHKMKG---KAFNAIASSREEEGSYYLL

Query:  SWKCQCGNKIYQP
         WKC C    Y P
Subjt:  SWKCQCGNKIYQP
Q9T068 EPIDERMAL PATTERNING FACTOR-like protein 24.3e-0436.84Show/hide
Query:  IGSRPPGCVN-KCMSCRPCMAAAAVV-PVHKMKGKAFNAIASSRE----------EEGSYYLLSWKCQCGNKIYQP
        IGSRPP C   +C SC  C A      P  K+      + +SS E          +  +Y  +SWKC+CGN IY P
Subjt:  IGSRPPGCVN-KCMSCRPCMAAAAVV-PVHKMKGKAFNAIASSRE----------EEGSYYLLSWKCQCGNKIYQP
Arabidopsis top hitse value%identityAlignment
AT4G37810.1 unknown protein3.0e-0536.84Show/hide
Query:  IGSRPPGCVN-KCMSCRPCMAAAAVV-PVHKMKGKAFNAIASSRE----------EEGSYYLLSWKCQCGNKIYQP
        IGSRPP C   +C SC  C A      P  K+      + +SS E          +  +Y  +SWKC+CGN IY P
Subjt:  IGSRPPGCVN-KCMSCRPCMAAAAVV-PVHKMKGKAFNAIASSRE----------EEGSYYLLSWKCQCGNKIYQP
AT5G10310.1 unknown protein8.0e-0625.66Show/hide
Query:  MAMPFLKLAIVLAVFFFFFSPV-PPKSVGLVL-EANMKIGSRPPGCVNKCMSCRPCMA--------AAAVVPVHKMKG---KAFNAIASSREEEGSYYLL
        + +P + + ++      F  P+ PP S  + L E   ++GS PP C N+C +C PCMA         +    V+   G   +  +++ +  ++  +Y  +
Subjt:  MAMPFLKLAIVLAVFFFFFSPV-PPKSVGLVL-EANMKIGSRPPGCVNKCMSCRPCMA--------AAAVVPVHKMKG---KAFNAIASSREEEGSYYLL

Query:  SWKCQCGNKIYQP
         WKC C    Y P
Subjt:  SWKCQCGNKIYQP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGCCATTCCTCAAACTGGCTATTGTTCTTGCTGTGTTCTTCTTCTTCTTCTCACCTGTTCCTCCTAAGTCAGTTGGGTTGGTTTTGGAGGCAAACATGAAGAT
TGGTTCACGGCCGCCGGGATGTGTGAATAAATGCATGAGTTGTAGGCCGTGCATGGCGGCGGCGGCGGTGGTGCCGGTGCATAAGATGAAGGGGAAGGCCTTCAATGCCA
TTGCTTCCTCTCGGGAGGAAGAGGGTAGCTATTATCTTCTCTCGTGGAAATGCCAATGTGGGAATAAGATCTATCAACCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTATGCCATTCCTCAAACTGGCTATTGTTCTTGCTGTGTTCTTCTTCTTCTTCTCACCTGTTCCTCCTAAGTCAGTTGGGTTGGTTTTGGAGGCAAACATGAAGAT
TGGTTCACGGCCGCCGGGATGTGTGAATAAATGCATGAGTTGTAGGCCGTGCATGGCGGCGGCGGCGGTGGTGCCGGTGCATAAGATGAAGGGGAAGGCCTTCAATGCCA
TTGCTTCCTCTCGGGAGGAAGAGGGTAGCTATTATCTTCTCTCGTGGAAATGCCAATGTGGGAATAAGATCTATCAACCCTAG
Protein sequenceShow/hide protein sequence
MAMPFLKLAIVLAVFFFFFSPVPPKSVGLVLEANMKIGSRPPGCVNKCMSCRPCMAAAAVVPVHKMKGKAFNAIASSREEEGSYYLLSWKCQCGNKIYQP