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CmoCh17G008780 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G008780
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr17:7998302..7998589
RNA-Seq ExpressionCmoCh17G008780
SyntenyCmoCh17G008780
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575637.1 hypothetical protein SDJN03_26276, partial [Cucurbita argyrosperma subsp. sororia]8.1e-4297.87Show/hide
Query:  HMVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL
        +MVLDSALSSPHRRSPSFCKSFT+ELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL
Subjt:  HMVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL
XP_011659492.1 uncharacterized protein LOC101216292 [Cucumis sativus]6.2e-3487.1Show/hide
Query:  MVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL
        MVLDS LSSPHRRSPSF KSF +EL  WSTLVQRHRFLLTALVLLT LCTIYLYFAVTLGSSSSCFGLTG QKA+C  EL KTSMAKGKLKIL
Subjt:  MVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL
XP_022953174.1 uncharacterized protein LOC111455793 [Cucurbita moschata]1.1e-43100Show/hide
Query:  MHMVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL
        MHMVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL
Subjt:  MHMVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL
XP_022991821.1 uncharacterized protein LOC111488353 [Cucurbita maxima]3.6e-42100Show/hide
Query:  MVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL
        MVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL
Subjt:  MVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL
XP_023547592.1 uncharacterized protein LOC111806485 [Cucurbita pepo subsp. pepo]1.1e-4198.92Show/hide
Query:  MVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL
        MVLDSALSSPHRRSPSFCKSFTDELDGWSTLV+RHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL
Subjt:  MVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL
TrEMBL top hitse value%identityAlignment
A0A0A0K6S1 Uncharacterized protein3.0e-3487.1Show/hide
Query:  MVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL
        MVLDS LSSPHRRSPSF KSF +EL  WSTLVQRHRFLLTALVLLT LCTIYLYFAVTLGSSSSCFGLTG QKA+C  EL KTSMAKGKLKIL
Subjt:  MVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL
A0A1S4E387 uncharacterized protein LOC1034998513.3e-3383.87Show/hide
Query:  MVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL
        MVLDS LSSPHRRSPSF KSF +EL  WSTL+QRHRFLLTALVLLT LCTIYLYFAVTLGSSSSC+GLTG QKA+C  EL KTS+AKGKLKIL
Subjt:  MVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL
A0A5D3CG60 Uncharacterized protein1.1e-3384.04Show/hide
Query:  HMVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL
        +MVLDS LSSPHRRSPSF KSF +EL  WSTL+QRHRFLLTALVLLT LCTIYLYFAVTLGSSSSCFGLTG QKA+C  EL KTS+AKGKLKIL
Subjt:  HMVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL
A0A6J1GNW1 uncharacterized protein LOC1114557935.4e-44100Show/hide
Query:  MHMVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL
        MHMVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL
Subjt:  MHMVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL
A0A6J1JRU9 uncharacterized protein LOC1114883531.8e-42100Show/hide
Query:  MVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL
        MVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL
Subjt:  MVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16170.1 unknown protein1.3e-2160.87Show/hide
Query:  MVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGS-SSSCFGLTGAQKAECLQELVKTSMAKGKLK
        MVLD  +SSP RR     K + DEL  WSTL+QRH++LLTAL LL  LCT+YLYFAVTLG+  SSC+GLTG  KA C  +LV+ +++KGKLK
Subjt:  MVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGS-SSSCFGLTGAQKAECLQELVKTSMAKGKLK
AT1G79660.1 unknown protein1.3e-1856.52Show/hide
Query:  MVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSS-SCFGLTGAQKAECLQELVKTSMAKGKLK
        MVLD  +SSP RR P   K   D+L   ST+VQRHRFLLTA++LL  LCTIY+YFAVTLG+    C G+TG  KA C  E ++ S + GKLK
Subjt:  MVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSS-SCFGLTGAQKAECLQELVKTSMAKGKLK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACATGGTTCTTGACAGTGCACTGTCTTCTCCTCACAGGAGGTCTCCATCATTCTGTAAGTCCTTTACGGATGAGTTGGATGGTTGGTCGACTCTCGTTCAGCGACA
TCGCTTCCTCCTGACGGCACTTGTCCTCCTGACTGCTCTTTGCACAATTTACCTTTACTTTGCTGTCACCTTAGGCTCTTCCTCCTCTTGCTTTGGATTGACTGGGGCGC
AAAAAGCTGAGTGTCTACAGGAGCTTGTAAAGACTTCCATGGCTAAAGGGAAGCTGAAAATTCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCACATGGTTCTTGACAGTGCACTGTCTTCTCCTCACAGGAGGTCTCCATCATTCTGTAAGTCCTTTACGGATGAGTTGGATGGTTGGTCGACTCTCGTTCAGCGACA
TCGCTTCCTCCTGACGGCACTTGTCCTCCTGACTGCTCTTTGCACAATTTACCTTTACTTTGCTGTCACCTTAGGCTCTTCCTCCTCTTGCTTTGGATTGACTGGGGCGC
AAAAAGCTGAGTGTCTACAGGAGCTTGTAAAGACTTCCATGGCTAAAGGGAAGCTGAAAATTCTGTGA
Protein sequenceShow/hide protein sequence
MHMVLDSALSSPHRRSPSFCKSFTDELDGWSTLVQRHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL