; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh17G009050 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G009050
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionbox C/D snoRNA protein 1-like
Genome locationCmo_Chr17:8176226..8179025
RNA-Seq ExpressionCmoCh17G009050
SyntenyCmoCh17G009050
Gene Ontology termsNA
InterPro domainsIPR007529 - Zinc finger, HIT-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014219.1 Box C/D snoRNA protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-16783.78Show/hide
Query:  MAEGDATVSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKL
        MAEGDATVSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKL
Subjt:  MAEGDATVSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKL

Query:  CPYTHAYFRLPFHLKSLRTAALSRRTKIMFLPTGMTKRENKRGKKQSSGQWNGGLTLQILVNENSKLSTILENHLQPSPWKNQPQKFCEQLDSLKFFVRT
        CPYTHAYFRLPFHLKSLRTAALSRRTKIMFLPTGMTKREN +                      ++    +++H+               +DS   F   
Subjt:  CPYTHAYFRLPFHLKSLRTAALSRRTKIMFLPTGMTKRENKRGKKQSSGQWNGGLTLQILVNENSKLSTILENHLQPSPWKNQPQKFCEQLDSLKFFVRT

Query:  YPKGATSPFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDDNSCNPQVLDLLKVSTS
          +GATSPF ELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDDNSCNPQVLDLLKVSTS
Subjt:  YPKGATSPFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDDNSCNPQVLDLLKVSTS

Query:  SPHGATLGNHEFGNGPNSSSQAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKGVEEPEEGEIME
        SPHGATLGNHEFGNGPNSSSQAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKGVEE EEGEIME
Subjt:  SPHGATLGNHEFGNGPNSSSQAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKGVEEPEEGEIME

XP_022959527.1 box C/D snoRNA protein 1-like [Cucurbita moschata]3.5e-15772.1Show/hide
Query:  MAEGD-----ATVSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQR
        MAEGD     A  +ASTS NREGSSLC+EC SNPSKYKCPACSLRSCSL+CV  HKR SGCTGKRK  Q VP+SQFNDS+LLSDYNLLEEVKRMAESAQR
Subjt:  MAEGD-----ATVSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQR

Query:  FRKKLCPYTHAYFRLPFHLKSLRTAALSRRTKIMFLPTGMTKRENKRGKKQS-------SGQWNGGLTLQIL----VNENSKLSTILENHLQPSPWKNQP
         RKKLCPYTH Y+RLPFHLKSLRTAA SRRTKIMFLPTGMTKRE  + +          + +W    T  +L    VNEN+ LST+LENHLQPSPWKNQ 
Subjt:  FRKKLCPYTHAYFRLPFHLKSLRTAALSRRTKIMFLPTGMTKRENKRGKKQS-------SGQWNGGLTLQIL----VNENSKLSTILENHLQPSPWKNQP

Query:  QKFCEQLDSLKFFVRTYPKGATSPFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDD
        QKFCEQLDSLKFFVRTYPKGA +PF ELDS++PIRQLF NLVFVEYPVIYV LPSQTPNF+VVKTANP+SHNPE  NTGKNDLAS EGV FRVEEIEDDD
Subjt:  QKFCEQLDSLKFFVRTYPKGATSPFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDD

Query:  NSCNPQVLDLLKVSTSSPH---------GAT-------LGNHEFGNGPNSSSQAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKGVE-
        NS N QVLDL+K S SSPH         GAT       +G HE GN PNSSSQA+EL V K LEFDFEQDL+DTYSNIMAQINPDDFLDW+ DFSKGVE 
Subjt:  NSCNPQVLDLLKVSTSSPH---------GAT-------LGNHEFGNGPNSSSQAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKGVE-

Query:  --------------EPEEGEIME
                      E EEGEIME
Subjt:  --------------EPEEGEIME

XP_023548329.1 box C/D snoRNA protein 1-like isoform X1 [Cucurbita pepo subsp. pepo]1.7e-18084.25Show/hide
Query:  MAEGDATVSASTSSNRE-GSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKK
        MAEGDAT+SASTSSNRE GSSLCEECKS PSKYKCPACSLRSCSLNCV AHKRHSGCTGKRKHIQLV LSQFNDSILLSDYNLLEEVKRMAESAQRFRKK
Subjt:  MAEGDATVSASTSSNRE-GSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKK

Query:  LCPYTHAYFRLPFHLKSLRTAALSRRTKIMFLPTGMTKRENKRGKKQS-------SGQWNGGLTLQIL----VNENSKLSTILENHLQPSPWKNQPQKFC
        LCPYTHAYFR PFHLKSLRTAA SRRTKIMFLPTGMTKREN + +          + +W    T  +L    VNENSKLSTILENHLQPSPWKNQ Q FC
Subjt:  LCPYTHAYFRLPFHLKSLRTAALSRRTKIMFLPTGMTKRENKRGKKQS-------SGQWNGGLTLQIL----VNENSKLSTILENHLQPSPWKNQPQKFC

Query:  EQLDSLKFFVRTYPKGATSPFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDDNSCN
        EQLDSLKFFVR YPKGATSPFHELDSRLPIR+LFYNLVFVEYPVIYVVLPSQTPNFQVVKTA P SHNPEDTNT KNDLASHEGVSFRVEEIEDDDNSCN
Subjt:  EQLDSLKFFVRTYPKGATSPFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDDNSCN

Query:  PQVLDLLKVSTSSPHGAT------------LGNHEFGNGPNSSSQAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKGVEEPEEGEIME
        P+VLDLLKVSTSSP                +G HEFGNGPNSSSQAEE+AVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKGVEE EEGEIME
Subjt:  PQVLDLLKVSTSSPHGAT------------LGNHEFGNGPNSSSQAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKGVEEPEEGEIME

XP_023548330.1 box C/D snoRNA protein 1-like isoform X2 [Cucurbita pepo subsp. pepo]3.0e-18085.86Show/hide
Query:  MAEGDATVSASTSSNRE-GSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKK
        MAEGDAT+SASTSSNRE GSSLCEECKS PSKYKCPACSLRSCSLNCV AHKRHSGCTGKRKHIQLV LSQFNDSILLSDYNLLEEVKRMAESAQRFRKK
Subjt:  MAEGDATVSASTSSNRE-GSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKK

Query:  LCPYTHAYFRLPFHLKSLRTAALSRRTKIMFLPTGMTKRENKRGKKQSSGQWNGGLTLQILVNENSKLSTILENHLQPSPWKNQPQKFCEQLDSLKFFVR
        LCPYTHAYFR PFHLKSLRTAA SRRTKIMFLPTGMTKREN + +                VNENSKLSTILENHLQPSPWKNQ Q FCEQLDSLKFFVR
Subjt:  LCPYTHAYFRLPFHLKSLRTAALSRRTKIMFLPTGMTKRENKRGKKQSSGQWNGGLTLQILVNENSKLSTILENHLQPSPWKNQPQKFCEQLDSLKFFVR

Query:  TYPKGATSPFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDDNSCNPQVLDLLKVST
         YPKGATSPFHELDSRLPIR+LFYNLVFVEYPVIYVVLPSQTPNFQVVKTA P SHNPEDTNT KNDLASHEGVSFRVEEIEDDDNSCNP+VLDLLKVST
Subjt:  TYPKGATSPFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDDNSCNPQVLDLLKVST

Query:  SSPHGAT------------LGNHEFGNGPNSSSQAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKGVEEPEEGEIME
        SSP                +G HEFGNGPNSSSQAEE+AVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKGVEE EEGEIME
Subjt:  SSPHGAT------------LGNHEFGNGPNSSSQAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKGVEEPEEGEIME

XP_038900096.1 box C/D snoRNA protein 1-like [Benincasa hispida]2.1e-16576.32Show/hide
Query:  MAEGDATVSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKL
        MAEGDAT +ASTSSNR+ SSLC+ECKSNPSKYKCPACS+RSCSLNCV AHKR SGCTGKRK  Q VPLSQFNDSILLSDYNLLEEVKRMAESAQR RKKL
Subjt:  MAEGDATVSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKL

Query:  CPYTHAYFRLPFHLKSLRTAALSRRTKIMFLPTGMTKRENKRGKKQS-------SGQWNGGLTLQIL----VNENSKLSTILENHLQPSPWKNQPQKFCE
        CPYTHAYFRLPFHLKSLRTAA SRRTKIMFLPTGMTKREN + +          + +W       +L    VNENSKLSTILENHLQPSPWKNQ +KFCE
Subjt:  CPYTHAYFRLPFHLKSLRTAALSRRTKIMFLPTGMTKRENKRGKKQS-------SGQWNGGLTLQIL----VNENSKLSTILENHLQPSPWKNQPQKFCE

Query:  QLDSLKFFVRTYPKGATSPFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDDNSCNP
        QLDSLKFFVRTYPKGATSPF ELDSRLPIRQLF NLVFVEYPVIYV LPSQTPNF+VVKTANPMS NPE TN GKN+LASHEGVSFRVEEIEDDDNS NP
Subjt:  QLDSLKFFVRTYPKGATSPFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDDNSCNP

Query:  QVLDLLKVSTSSP---------HGAT-------LGNHEFGNGPNSSSQAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKG--------
        QVLDL++VST SP         H AT       +G  EFGN PNSSSQA+EL V K  EFDFEQDLID YSNIMAQINPDDFLDWEGDFSKG        
Subjt:  QVLDLLKVSTSSP---------HGAT-------LGNHEFGNGPNSSSQAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKG--------

Query:  -------VEEPEEGEIME
               VEE EEGEIME
Subjt:  -------VEEPEEGEIME

TrEMBL top hitse value%identityAlignment
A0A0A0K6N1 HIT-type domain-containing protein1.6e-15573.21Show/hide
Query:  MAEGDATVSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKL
        MAE DATV+ STSSN++GSSLCEECKSNPSKYKCPACS+RSCSLNCV AHKR SGCTGKRK  Q VPLSQFNDSILLSDYNLLEEVKRMAESAQR RKKL
Subjt:  MAEGDATVSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKL

Query:  CPYTHAYFRLPFHLKSLRTAALSRRTKIMFLPTGMTKRENKRGKKQS-------SGQWNGGLTLQIL----VNENSKLSTILENHLQPSPWKNQPQKFCE
        CPYTHAYFRLPFHLKSLR AA +RRTKIMFLPTGMTKREN + +          + +W    T  +L    VNENSKLSTILENHL+P PWK Q QKF E
Subjt:  CPYTHAYFRLPFHLKSLRTAALSRRTKIMFLPTGMTKRENKRGKKQS-------SGQWNGGLTLQIL----VNENSKLSTILENHLQPSPWKNQPQKFCE

Query:  QLDSLKFFVRTYPKGATSPFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDDNSCNP
        QLD LKFFVRTYPKGATS F ELDS LPIRQLF NL FVEYPVIYVVLPSQTPNF+VVKTANP+S N E  N  KNDLASHEGV FRVEEIE+D+NSCNP
Subjt:  QLDSLKFFVRTYPKGATSPFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDDNSCNP

Query:  QVLDLLKVSTSSP---------HGAT-------LGNHEFGNGPNSSSQAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSK---------
        QVLDL+KVSTSSP         HGAT       +G  E GN P SSSQA E  V K LEFDFEQDLID YSNIMAQINPDDFLDW+GDFSK         
Subjt:  QVLDLLKVSTSSP---------HGAT-------LGNHEFGNGPNSSSQAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSK---------

Query:  ------GVEEPEEGEIME
               VEE EEGEIME
Subjt:  ------GVEEPEEGEIME

A0A1S3CEQ2 box C/D snoRNA protein 1-like9.4e-15674.2Show/hide
Query:  MAEGDATVSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKL
        MAE DAT++ STSSN +GSSLCEECKSNPSKYKCPACS+RSCSLNCV AHKR SGCTGKRK  Q VPLSQFNDSILLSDYNLLEEVKRMAESAQR RKKL
Subjt:  MAEGDATVSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKL

Query:  CPYTHAYFRLPFHLKSLRTAALSRRTKIMFLPTGMTKRENKRGKKQS-------SGQWNGGLTLQIL----VNENSKLSTILENHLQPSPWKNQPQKFCE
        CPYTHAYFRLPFHLKSLR AA +RRTKIMFLPTGMTKREN + +          + +W    T  +L    VNENSKLSTIL NHL+PSPWK Q QKF E
Subjt:  CPYTHAYFRLPFHLKSLRTAALSRRTKIMFLPTGMTKRENKRGKKQS-------SGQWNGGLTLQIL----VNENSKLSTILENHLQPSPWKNQPQKFCE

Query:  QLDSLKFFVRTYPKGATSPFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDDNSCNP
        QLD LK FVRTYPKGA SPFHELDS LPIRQLF NL FVEYPVIYVVLP QTPNF+VVKTANP S N E +N  +NDLASH GV FRVEEIEDD+NSCNP
Subjt:  QLDSLKFFVRTYPKGATSPFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDDNSCNP

Query:  QVLDLLKVSTSSPHGAT-----LGNHEFGNGPNSSSQAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKGV---------------EEP
        QVLDL+KVSTSSPH        +G  E GN P SSSQA EL V K LEFDFEQDLID YSNIMAQINPDDFLDWEGDFSK V               EE 
Subjt:  QVLDLLKVSTSSPHGAT-----LGNHEFGNGPNSSSQAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKGV---------------EEP

Query:  EEGEIME
        EEGEIME
Subjt:  EEGEIME

A0A5D3CJA8 Box C/D snoRNA protein 1-like7.4e-15374Show/hide
Query:  VSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAY
        ++ STSSN +GSSLCEECKSNPSKYKCPACS+RSCSLNCV AHKR SGCTGKRK  Q VPLSQFNDSILLSDYNLLEEVKRMAESAQR RKKLCPYTHAY
Subjt:  VSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAY

Query:  FRLPFHLKSLRTAALSRRTKIMFLPTGMTKRENKRGKKQS-------SGQWNGGLTLQIL----VNENSKLSTILENHLQPSPWKNQPQKFCEQLDSLKF
        FRLPFHLKSLR AA +RRTKIMFLPTGMTKREN + +          + +W    T  +L    VNENSKLSTIL NHL+PSPWK Q QKF EQLD LK 
Subjt:  FRLPFHLKSLRTAALSRRTKIMFLPTGMTKRENKRGKKQS-------SGQWNGGLTLQIL----VNENSKLSTILENHLQPSPWKNQPQKFCEQLDSLKF

Query:  FVRTYPKGATSPFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDDNSCNPQVLDLLK
        FVRTYPKGA SPFHELDS LPIRQLF NL FVEYPVIYVVLP QTPNF+VVKTANP S N E +N  +NDLASH GV FRVEEIEDD+NSCNPQVLDL+K
Subjt:  FVRTYPKGATSPFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDDNSCNPQVLDLLK

Query:  VSTSSPHGAT-----LGNHEFGNGPNSSSQAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKGV---------------EEPEEGEIME
        VSTSSPH        +G  E GN P SSSQA EL V K LEFDFEQDLID YSNIMAQINPDDFLDWEGDFSK V               EE EEGEIME
Subjt:  VSTSSPHGAT-----LGNHEFGNGPNSSSQAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKGV---------------EEPEEGEIME

A0A6J1H4S8 box C/D snoRNA protein 1-like1.7e-15772.1Show/hide
Query:  MAEGD-----ATVSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQR
        MAEGD     A  +ASTS NREGSSLC+EC SNPSKYKCPACSLRSCSL+CV  HKR SGCTGKRK  Q VP+SQFNDS+LLSDYNLLEEVKRMAESAQR
Subjt:  MAEGD-----ATVSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQR

Query:  FRKKLCPYTHAYFRLPFHLKSLRTAALSRRTKIMFLPTGMTKRENKRGKKQS-------SGQWNGGLTLQIL----VNENSKLSTILENHLQPSPWKNQP
         RKKLCPYTH Y+RLPFHLKSLRTAA SRRTKIMFLPTGMTKRE  + +          + +W    T  +L    VNEN+ LST+LENHLQPSPWKNQ 
Subjt:  FRKKLCPYTHAYFRLPFHLKSLRTAALSRRTKIMFLPTGMTKRENKRGKKQS-------SGQWNGGLTLQIL----VNENSKLSTILENHLQPSPWKNQP

Query:  QKFCEQLDSLKFFVRTYPKGATSPFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDD
        QKFCEQLDSLKFFVRTYPKGA +PF ELDS++PIRQLF NLVFVEYPVIYV LPSQTPNF+VVKTANP+SHNPE  NTGKNDLAS EGV FRVEEIEDDD
Subjt:  QKFCEQLDSLKFFVRTYPKGATSPFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDD

Query:  NSCNPQVLDLLKVSTSSPH---------GAT-------LGNHEFGNGPNSSSQAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKGVE-
        NS N QVLDL+K S SSPH         GAT       +G HE GN PNSSSQA+EL V K LEFDFEQDL+DTYSNIMAQINPDDFLDW+ DFSKGVE 
Subjt:  NSCNPQVLDLLKVSTSSPH---------GAT-------LGNHEFGNGPNSSSQAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKGVE-

Query:  --------------EPEEGEIME
                      E EEGEIME
Subjt:  --------------EPEEGEIME

A0A6J1KUW8 box C/D snoRNA protein 17.2e-15671.63Show/hide
Query:  MAEGD-----ATVSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQR
        MAEGD     A  +ASTS NREGSSLCEEC SNPSKYKCPACSLRSCSL+CV  HKR SGCTGKRK  Q VP+SQFNDS+LLSDYNLLEEVKRMAESAQR
Subjt:  MAEGD-----ATVSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQR

Query:  FRKKLCPYTHAYFRLPFHLKSLRTAALSRRTKIMFLPTGMTKRENKRGKKQS-------SGQWNGGLTLQIL----VNENSKLSTILENHLQPSPWKNQP
         RKKLCPYTH Y+RLPFHLKSLRTAA SRRTKIMFLPTGMTKRE  + +          + +W    T  +L    VNEN+ LST+LENHLQPSPWKNQ 
Subjt:  FRKKLCPYTHAYFRLPFHLKSLRTAALSRRTKIMFLPTGMTKRENKRGKKQS-------SGQWNGGLTLQIL----VNENSKLSTILENHLQPSPWKNQP

Query:  QKFCEQLDSLKFFVRTYPKGATSPFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDD
        QKFCEQLDSLKFFVRTYPKGA  PF ELDS++PIRQLF NLVFVEYPVIYV LPSQTPNF+V+KTANP+SHNPE  NTGKNDL S EGV FRVEEIEDDD
Subjt:  QKFCEQLDSLKFFVRTYPKGATSPFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDD

Query:  NSCNPQVLDLLKVSTSSPH---------GAT-------LGNHEFGNGPNSSSQAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKGVE-
        NS N QVLDL+K S SSP+         GAT       +G HE GN PNSSSQA+EL V K LEFDFEQDL+DTYSNIMAQINPDDFLDW+ DFSKGVE 
Subjt:  NSCNPQVLDLLKVSTSSPH---------GAT-------LGNHEFGNGPNSSSQAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKGVE-

Query:  --------------EPEEGEIME
                      E EEGEIME
Subjt:  --------------EPEEGEIME

SwissProt top hitse value%identityAlignment
O74906 Putative box C/D snoRNA protein SPCC613.071.1e-0730.32Show/hide
Query:  SSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPF
        S NR G  +C  C+ N SKY+CP C  R C L C   HKR + C+G+R     VP S+  +  L SD+N L  V+R+    +    ++   ++   R   
Subjt:  SSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPF

Query:  HLK-SLRTAALSRRTKIMFLPTGMTKRENKR---GKKQSSGQW------NGGLTLQILVNENSKLSTILENHLQPSPWKNQPQKFCEQ
         LK SL  A ++    I F P    KR   R    KK    +W      +   T + L +E S+ + I  +H +  P +   +K  E+
Subjt:  HLK-SLRTAALSRRTKIMFLPTGMTKRENKR---GKKQSSGQW------NGGLTLQILVNENSKLSTILENHLQPSPWKNQPQKFCEQ

P38772 Box C/D snoRNA protein 11.3e-0536.71Show/hide
Query:  LCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGK----RKHIQLVPLSQFND------SILLSDYNLLEEVKRM
        LC  C     KYKCP C +++CSL C K HK    C+G+    +++I    L Q +D      + +  DYN L ++KRM
Subjt:  LCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGK----RKHIQLVPLSQFND------SILLSDYNLLEEVKRM

Q3UFB2 Box C/D snoRNA protein 15.9e-1426.77Show/hide
Query:  SSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQR--FRKKLCPYTHAYFRL
        S  +   S CE C +  +KY+CP C   SCSL CVK HK    C+G R     V L QF +  LLSDY  LE+V R A+   R  F K+     + +F  
Subjt:  SSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQR--FRKKLCPYTHAYFRL

Query:  PFHLKSLRTAALSRRTKIMFLPTGMTKR-ENKRGKKQSSGQWNGGLTLQI----------LVNENSKLSTILENHLQPSP----WKNQPQKFCEQLDSLK
              ++  A  +   +  LP G +KR EN         Q+   + LQ            V ++  ++ IL+ ++ P       + + + + +    ++
Subjt:  PFHLKSLRTAALSRRTKIMFLPTGMTKR-ENKRGKKQSSGQWNGGLTLQI----------LVNENSKLSTILENHLQPSP----WKNQPQKFCEQLDSLK

Query:  FFVRTYPKGATS-PFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVK
          +R          +HELD    +     + V +EYP ++VVL   + + Q+++
Subjt:  FFVRTYPKGATS-PFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVK

Q5RF97 Box C/D snoRNA protein 14.4e-1727.71Show/hide
Query:  SLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQR--FRKKLCPYTHAYFRLPFHLKSL
        S CE C +  +KY+CP C   SCSL CVK HK    C G R     + + QF +  LLSDY  LE+V R A+   R  F K+     H YF        +
Subjt:  SLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQR--FRKKLCPYTHAYFRLPFHLKSL

Query:  RTAALSRRTKIMFLPTGMTKRENKR---GKKQSSGQWNGGLT--------LQILVNENSKLSTILENHLQPSPWKNQP------QKFCEQLDSLKFFVR-
        +  A  +   +  LP G TKR+       KK+    W+  L         ++  V ++  ++ IL+ ++ P   K+ P      + +      ++  ++ 
Subjt:  RTAALSRRTKIMFLPTGMTKRENKR---GKKQSSGQWNGGLT--------LQILVNENSKLSTILENHLQPSPWKNQP------QKFCEQLDSLKFFVR-

Query:  TYPKGATSPFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVK
         Y +     ++ELD    +     N V +EYP ++VVL     + +V++
Subjt:  TYPKGATSPFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVK

Q9NWK9 Box C/D snoRNA protein 13.7e-1627.42Show/hide
Query:  SLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQR--FRKKLCPYTHAYFRLPFHLKSL
        S CE C +  +KY+CP C   SCSL CVK HK    C G R     + + QF +  LLSDY  LE+V R A+   R  F K+     + YF        +
Subjt:  SLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQR--FRKKLCPYTHAYFRLPFHLKSL

Query:  RTAALSRRTKIMFLPTGMTKRENKR---GKKQSSGQWNGGLT--------LQILVNENSKLSTILENHLQPSPWKNQP------QKFCEQLDSLKFFVR-
        +  A  +   +  LP G TKR+       KK+    W+  L         ++  V ++  ++ IL+ ++ P   K+ P      + +      ++  ++ 
Subjt:  RTAALSRRTKIMFLPTGMTKRENKR---GKKQSSGQWNGGLT--------LQILVNENSKLSTILENHLQPSPWKNQP------QKFCEQLDSLKFFVR-

Query:  TYPKGATSPFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVV
         Y +     ++ELD    +     N V +EYP ++VVL     + +V+
Subjt:  TYPKGATSPFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVV

Arabidopsis top hitse value%identityAlignment
AT1G04945.1 HIT-type Zinc finger family protein8.3e-8046.52Show/hide
Query:  SLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLRT
        S+CEECK NP KYKCP CS+RSC+L CVKAHK+ +GCTGKRK   +VPLS+F+D++LLSDYN+LEE KR+AESA R R +LC   H  ++LP+ LKSL++
Subjt:  SLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLRT

Query:  AALSRRTKIMFLPTGMTKRENKRGKKQSSG-------QWNGGLTLQILVN----ENSKLSTILENHLQPSPWKNQPQKFCE-QLDSLKFFVRTYPKGATS
        AA SRRTK+ +LP+GM KREN + +  +         +W    T  ILV+    E+  L ++++NHL+P PW ++ + FC+  LDSLK F+R YPKGA +
Subjt:  AALSRRTKIMFLPTGMTKRENKRGKKQSSG-------QWNGGLTLQILVN----ENSKLSTILENHLQPSPWKNQPQKFCE-QLDSLKFFVRTYPKGATS

Query:  PFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDD-NSCNPQVLDLLKVSTSSP-HGA
        PF ELD + P+R+    +V +EYPVI+V LPSQ+  F+V+K  N  + NP D+    +   +  G++FR EEIE+DD +S  P+VL L+K    +P    
Subjt:  PFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDD-NSCNPQVLDLLKVSTSSP-HGA

Query:  TLGNHEFGNGPNSSS---QAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKGVEEPEEGEIME
        +  +   G G N+S+      E   +  +E +FEQ LIDTYS++ A++NPD       DF     + EEGEI+E
Subjt:  TLGNHEFGNGPNSSS---QAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKGVEEPEEGEIME

AT1G04945.2 HIT-type Zinc finger family protein6.8e-8246.2Show/hide
Query:  SLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLRT
        S+CEECK NP KYKCP CS+RSC+L CVKAHK+ +GCTGKRK   +VPLS+F+D++LLSDYN+LEE KR+AESA R R +LC   H  ++LP+ LKSL++
Subjt:  SLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLRT

Query:  AALSRRTKIMFLPTGMTKRENKRGKKQSSG-------QWNGGLTLQILVN----ENSKLSTILENHLQPSPWKNQPQKFCE-QLDSLKFFVRTYPKGATS
        AA SRRTK+ +LP+GM KREN + +  +         +W    T  ILV+    E+  L ++++NHL+P PW ++ + FC+  LDSLK F+R YPKGA +
Subjt:  AALSRRTKIMFLPTGMTKRENKRGKKQSSG-------QWNGGLTLQILVN----ENSKLSTILENHLQPSPWKNQPQKFCE-QLDSLKFFVRTYPKGATS

Query:  PFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDD-NSCNPQVLDLLKVSTSSP-HGA
        PF ELD + P+R+    +V +EYPVI+V LPSQ+  F+V+K  N  + NP D+    +   +  G++FR EEIE+DD +S  P+VL L+K    +P    
Subjt:  PFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDD-NSCNPQVLDLLKVSTSSP-HGA

Query:  TLGNHEFGNGPNSSS---QAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKGVEEPE
        +  +   G G N+S+      E   +  +E +FEQ LIDTYS++ A++NP D+ ++E +F+KG++  +
Subjt:  TLGNHEFGNGPNSSS---QAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKGVEEPE

AT1G04945.3 HIT-type Zinc finger family protein6.8e-8246.2Show/hide
Query:  SLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLRT
        S+CEECK NP KYKCP CS+RSC+L CVKAHK+ +GCTGKRK   +VPLS+F+D++LLSDYN+LEE KR+AESA R R +LC   H  ++LP+ LKSL++
Subjt:  SLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLRT

Query:  AALSRRTKIMFLPTGMTKRENKRGKKQSSG-------QWNGGLTLQILVN----ENSKLSTILENHLQPSPWKNQPQKFCE-QLDSLKFFVRTYPKGATS
        AA SRRTK+ +LP+GM KREN + +  +         +W    T  ILV+    E+  L ++++NHL+P PW ++ + FC+  LDSLK F+R YPKGA +
Subjt:  AALSRRTKIMFLPTGMTKRENKRGKKQSSG-------QWNGGLTLQILVN----ENSKLSTILENHLQPSPWKNQPQKFCE-QLDSLKFFVRTYPKGATS

Query:  PFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDD-NSCNPQVLDLLKVSTSSP-HGA
        PF ELD + P+R+    +V +EYPVI+V LPSQ+  F+V+K  N  + NP D+    +   +  G++FR EEIE+DD +S  P+VL L+K    +P    
Subjt:  PFHELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDD-NSCNPQVLDLLKVSTSSP-HGA

Query:  TLGNHEFGNGPNSSS---QAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKGVEEPE
        +  +   G G N+S+      E   +  +E +FEQ LIDTYS++ A++NP D+ ++E +F+KG++  +
Subjt:  TLGNHEFGNGPNSSS---QAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKGVEEPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAAGGAGATGCAACTGTGTCAGCTTCCACAAGCTCCAACCGCGAAGGATCATCACTTTGCGAAGAGTGTAAATCGAACCCATCCAAGTACAAGTGCCCCGCTTG
TTCTTTGCGCTCTTGTAGCCTCAACTGCGTCAAGGCTCACAAGAGGCACAGTGGCTGTACTGGCAAGAGGAAGCACATCCAACTCGTCCCGCTTTCTCAGTTTAACGATT
CCATCCTTCTTTCTGATTATAATTTGCTGGAGGAAGTGAAAAGAATGGCTGAATCAGCTCAAAGATTCAGAAAGAAATTGTGCCCTTATACTCATGCTTACTTTCGTCTA
CCATTTCATCTTAAAAGTTTGCGCACTGCTGCTTTAAGCAGGAGAACAAAAATCATGTTTCTCCCTACAGGAATGACGAAAAGGGAAAACAAAAGAGGGAAAAAACAATC
TTCTGGACAATGGAATGGTGGTTTAACTCTACAGATATTAGTTAATGAAAACTCGAAGCTTTCTACCATTCTTGAAAACCATTTACAACCAAGTCCGTGGAAAAATCAAC
CTCAGAAGTTCTGTGAGCAGCTGGATAGCCTCAAATTTTTTGTCCGTACATACCCCAAGGGAGCTACATCGCCTTTCCATGAGCTGGACTCGAGATTGCCAATTAGACAA
CTATTTTACAACTTGGTTTTTGTGGAATACCCTGTTATATATGTTGTTCTACCCTCTCAAACTCCCAACTTCCAAGTAGTTAAAACGGCCAATCCAATGAGTCATAATCC
AGAAGATACCAATACTGGAAAAAATGATCTTGCTAGTCATGAAGGTGTTTCCTTCAGGGTGGAAGAAATAGAAGATGATGACAACTCCTGTAATCCTCAGGTTCTTGATC
TGTTGAAAGTATCAACTTCAAGCCCACATGGTGCAACACTGGGGAACCATGAGTTTGGGAATGGCCCGAATTCAAGCTCCCAGGCCGAGGAGCTAGCGGTTTCGAAAGGA
TTGGAGTTTGATTTTGAGCAAGATCTGATAGATACATACTCAAATATCATGGCACAAATCAATCCAGATGATTTTCTTGATTGGGAAGGAGACTTTTCCAAGGGAGTTGA
AGAACCGGAGGAAGGAGAGATTATGGAATAG
mRNA sequenceShow/hide mRNA sequence
TCGTTCCAGTGTCTAAGATGGCCGAAGGAGATGCAACTGTGTCAGCTTCCACAAGCTCCAACCGCGAAGGATCATCACTTTGCGAAGAGTGTAAATCGAACCCATCCAAG
TACAAGTGCCCCGCTTGTTCTTTGCGCTCTTGTAGCCTCAACTGCGTCAAGGCTCACAAGAGGCACAGTGGCTGTACTGGCAAGAGGAAGCACATCCAACTCGTCCCGCT
TTCTCAGTTTAACGATTCCATCCTTCTTTCTGATTATAATTTGCTGGAGGAAGTGAAAAGAATGGCTGAATCAGCTCAAAGATTCAGAAAGAAATTGTGCCCTTATACTC
ATGCTTACTTTCGTCTACCATTTCATCTTAAAAGTTTGCGCACTGCTGCTTTAAGCAGGAGAACAAAAATCATGTTTCTCCCTACAGGAATGACGAAAAGGGAAAACAAA
AGAGGGAAAAAACAATCTTCTGGACAATGGAATGGTGGTTTAACTCTACAGATATTAGTTAATGAAAACTCGAAGCTTTCTACCATTCTTGAAAACCATTTACAACCAAG
TCCGTGGAAAAATCAACCTCAGAAGTTCTGTGAGCAGCTGGATAGCCTCAAATTTTTTGTCCGTACATACCCCAAGGGAGCTACATCGCCTTTCCATGAGCTGGACTCGA
GATTGCCAATTAGACAACTATTTTACAACTTGGTTTTTGTGGAATACCCTGTTATATATGTTGTTCTACCCTCTCAAACTCCCAACTTCCAAGTAGTTAAAACGGCCAAT
CCAATGAGTCATAATCCAGAAGATACCAATACTGGAAAAAATGATCTTGCTAGTCATGAAGGTGTTTCCTTCAGGGTGGAAGAAATAGAAGATGATGACAACTCCTGTAA
TCCTCAGGTTCTTGATCTGTTGAAAGTATCAACTTCAAGCCCACATGGTGCAACACTGGGGAACCATGAGTTTGGGAATGGCCCGAATTCAAGCTCCCAGGCCGAGGAGC
TAGCGGTTTCGAAAGGATTGGAGTTTGATTTTGAGCAAGATCTGATAGATACATACTCAAATATCATGGCACAAATCAATCCAGATGATTTTCTTGATTGGGAAGGAGAC
TTTTCCAAGGGAGTTGAAGAACCGGAGGAAGGAGAGATTATGGAATAG
Protein sequenceShow/hide protein sequence
MAEGDATVSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRL
PFHLKSLRTAALSRRTKIMFLPTGMTKRENKRGKKQSSGQWNGGLTLQILVNENSKLSTILENHLQPSPWKNQPQKFCEQLDSLKFFVRTYPKGATSPFHELDSRLPIRQ
LFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDDNSCNPQVLDLLKVSTSSPHGATLGNHEFGNGPNSSSQAEELAVSKG
LEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKGVEEPEEGEIME