; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh17G009130 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G009130
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description60S ribosomal protein L6
Genome locationCmo_Chr17:8197274..8199162
RNA-Seq ExpressionCmoCh17G009130
SyntenyCmoCh17G009130
Gene Ontology termsGO:0000027 - ribosomal large subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000915 - 60S ribosomal protein L6E
IPR005568 - Ribosomal protein L6, N-terminal
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041997 - Ribosomal Protein L6, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575673.1 60S ribosomal protein L6, partial [Cucurbita argyrosperma subsp. sororia]3.3e-12199.13Show/hide
Query:  MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF
        MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAE SPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF
Subjt:  MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPL

Query:  IKSIDGVPELKAYLAARFSLKAGMKPHELVF
        IKSI+GVPELKAYLAARFSLKAGMKPHELVF
Subjt:  IKSIDGVPELKAYLAARFSLKAGMKPHELVF

XP_022954334.1 60S ribosomal protein L6-3-like [Cucurbita moschata]3.0e-122100Show/hide
Query:  MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF
        MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF
Subjt:  MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPL

Query:  IKSIDGVPELKAYLAARFSLKAGMKPHELVF
        IKSIDGVPELKAYLAARFSLKAGMKPHELVF
Subjt:  IKSIDGVPELKAYLAARFSLKAGMKPHELVF

XP_022991926.1 60S ribosomal protein L6-1-like [Cucurbita maxima]5.6e-12199.13Show/hide
Query:  MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF
        MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAK KADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF
Subjt:  MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPL

Query:  IKSIDGVPELKAYLAARFSLKAGMKPHELVF
        IKSI+GVPELKAYLAARFSLKAGMKPHELVF
Subjt:  IKSIDGVPELKAYLAARFSLKAGMKPHELVF

XP_023548319.1 uncharacterized protein LOC111806995 isoform X1 [Cucurbita pepo subsp. pepo]2.5e-12199.13Show/hide
Query:  MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF
        MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHD KLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF
Subjt:  MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPL

Query:  IKSIDGVPELKAYLAARFSLKAGMKPHELVF
        IKSI+GVPELKAYLAARFSLKAGMKPHELVF
Subjt:  IKSIDGVPELKAYLAARFSLKAGMKPHELVF

XP_023548320.1 uncharacterized protein LOC111806995 isoform X2 [Cucurbita pepo subsp. pepo]2.5e-12199.13Show/hide
Query:  MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF
        MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHD KLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF
Subjt:  MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPL

Query:  IKSIDGVPELKAYLAARFSLKAGMKPHELVF
        IKSI+GVPELKAYLAARFSLKAGMKPHELVF
Subjt:  IKSIDGVPELKAYLAARFSLKAGMKPHELVF

TrEMBL top hitse value%identityAlignment
A0A0A0K9V0 60S ribosomal protein L69.9e-11694.37Show/hide
Query:  MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF
        MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+ KA APAEK PKFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRF
Subjt:  MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSY IATSTKVDISGVN+EKFDDKYFSKE QKKKKKGEGEFFEAEKEEKSALPA++KDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPL

Query:  IKSIDGVPELKAYLAARFSLKAGMKPHELVF
        IKSI+ VPELKAYL ARFSLKAGMKPHELVF
Subjt:  IKSIDGVPELKAYLAARFSLKAGMKPHELVF

A0A6J1GSP4 60S ribosomal protein L6-3-like1.4e-122100Show/hide
Query:  MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF
        MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF
Subjt:  MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPL

Query:  IKSIDGVPELKAYLAARFSLKAGMKPHELVF
        IKSIDGVPELKAYLAARFSLKAGMKPHELVF
Subjt:  IKSIDGVPELKAYLAARFSLKAGMKPHELVF

A0A6J1H5C5 60S ribosomal protein L61.3e-11594.37Show/hide
Query:  MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF
        MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+ KADA  EK PKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF
Subjt:  MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSY IATSTKV+ISGVN EKFDDKYFSKEVQKKKKK EGEFFEAEKEEKSALPAD+KDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPL

Query:  IKSIDGVPELKAYLAARFSLKAGMKPHELVF
        IKSI+GVPELKAYLAARFSLK+GMKPHEL F
Subjt:  IKSIDGVPELKAYLAARFSLKAGMKPHELVF

A0A6J1JS55 60S ribosomal protein L6-1-like2.7e-12199.13Show/hide
Query:  MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF
        MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAK KADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF
Subjt:  MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPL

Query:  IKSIDGVPELKAYLAARFSLKAGMKPHELVF
        IKSI+GVPELKAYLAARFSLKAGMKPHELVF
Subjt:  IKSIDGVPELKAYLAARFSLKAGMKPHELVF

A0A6J1KWW3 60S ribosomal protein L63.8e-11593.94Show/hide
Query:  MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF
        MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+ KADA  EK PKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF
Subjt:  MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSY IATSTKV+ SGVN EKFDDKYFSKEVQKKKKK EGEFFEAEKEEKSALPAD+KDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPL

Query:  IKSIDGVPELKAYLAARFSLKAGMKPHELVF
        IKSI+GVPELKAYLAARFSLK+GMKPHEL F
Subjt:  IKSIDGVPELKAYLAARFSLKAGMKPHELVF

SwissProt top hitse value%identityAlignment
P34091 60S ribosomal protein L62.5e-10080.26Show/hide
Query:  KTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGK
        + P V+RNP+L+RG+GKYSRSKMYHKRGLWAIKAKNGGVFP+H  K       EK PKFYPADDVKKPL+NKRK + TKLRASITPGTVLIILAGRFKGK
Subjt:  KTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGK

Query:  RVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPLIKS
        RVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+Y IATSTKVDISGVN EKFDDKYF K+ +KK KKGEGEFFEAEK+E + LP ++KDDQKAVD  L+K+
Subjt:  RVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPLIKS

Query:  IDGVPELKAYLAARFSLKAGMKPHELVF
        I+GVPELKAYL ARFSLKAGMKPHELVF
Subjt:  IDGVPELKAYLAARFSLKAGMKPHELVF

Q2YGT9 60S ribosomal protein L65.0e-4846.4Show/hide
Query:  PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPA-------------------EKSPKFYPADDVKKPLVNKRK----ARLTK
        P  +RNP L+RG+G+YSRS MY ++ L+  K K      + + K K    A                    K P++YP +DV + L++  K      + K
Subjt:  PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPA-------------------EKSPKFYPADDVKKPLVNKRK----ARLTK

Query:  LRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVN-AEKFDDKYFSKEVQKKKKKGEGEFFEAEKEE
        LRASITPGT+LIIL GR +GKRV+FLKQL SGLLLVTGP  +N VPLRR +Q + IATSTK+DISGV   E   D YF K+  +K +  EGE F+ EK E
Subjt:  LRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVN-AEKFDDKYFSKEVQKKKKKGEGEFFEAEKEE

Query:  KSALPADRKDDQKAVDTPLIKSIDGVPELKAYLAARFSLKAGMKPHELVF
        K  +   RK DQKAVD+ +++ I  VP+L+ YL + F+L  G+ PH+LVF
Subjt:  KSALPADRKDDQKAVDTPLIKSIDGVPELKAYLAARFSLKAGMKPHELVF

Q9C9C5 60S ribosomal protein L6-32.3e-10182.46Show/hide
Query:  KTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGK
        +TP+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EK PKFYPA+DVKKPL N+R A+ TKLRASITPGTVLIILAGRFKGK
Subjt:  KTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGK

Query:  RVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPLIKS
        RVVFLKQL SGLLLVTGPFKINGVPLRRVNQ+Y I TSTKVDISGV  +KFDDKYF K  +KKKKK EGEFFEAEKEEK  +P  +KDDQKAVD  LIK+
Subjt:  RVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPLIKS

Query:  IDGVPELKAYLAARFSLKAGMKPHELVF
        I+ VPELK YL ARFSLK GMKPHELVF
Subjt:  IDGVPELKAYLAARFSLKAGMKPHELVF

Q9C9C6 60S ribosomal protein L6-24.3e-10081.58Show/hide
Query:  KTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGK
        +T +V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EK PKFYPA+DVKKPL N+R A+  KLRASITPGTVLIILAGRFKGK
Subjt:  KTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGK

Query:  RVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPLIKS
        RVVFLKQL SGLLLVTGPFKINGVPLRRVNQ+Y I TSTKVDISGV  +KFDDKYF K  +KKKKK EGEFFEAEKEEK  +P  +KDDQKAVD  LIK+
Subjt:  RVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPLIKS

Query:  IDGVPELKAYLAARFSLKAGMKPHELVF
        I+ VPELK YL ARFSLK GMKPHELVF
Subjt:  IDGVPELKAYLAARFSLKAGMKPHELVF

Q9FZ76 60S ribosomal protein L6-15.1e-10180.87Show/hide
Query:  APKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFK
        A +TP+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+ K DAP EK  KFYPA+DVKKPLVN+RK + TKL+ASITPGTVLIILAGRFK
Subjt:  APKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFK

Query:  GKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPLI
        GKRVVFLKQL SGLLLVTGPFKINGVPLRRVNQ+Y I TSTK+DISGVN EKFDDKYF K  +KKKKK EGEFFEAEKEEK  +P ++K+DQK VD  LI
Subjt:  GKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPLI

Query:  KSIDGVPELKAYLAARFSLKAGMKPHELVF
        KSI+ VPELK YL ARFSL  GMKPHELVF
Subjt:  KSIDGVPELKAYLAARFSLKAGMKPHELVF

Arabidopsis top hitse value%identityAlignment
AT1G18540.1 Ribosomal protein L6 family protein3.6e-10280.87Show/hide
Query:  APKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFK
        A +TP+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+ K DAP EK  KFYPA+DVKKPLVN+RK + TKL+ASITPGTVLIILAGRFK
Subjt:  APKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFK

Query:  GKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPLI
        GKRVVFLKQL SGLLLVTGPFKINGVPLRRVNQ+Y I TSTK+DISGVN EKFDDKYF K  +KKKKK EGEFFEAEKEEK  +P ++K+DQK VD  LI
Subjt:  GKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPLI

Query:  KSIDGVPELKAYLAARFSLKAGMKPHELVF
        KSI+ VPELK YL ARFSL  GMKPHELVF
Subjt:  KSIDGVPELKAYLAARFSLKAGMKPHELVF

AT1G74050.1 Ribosomal protein L6 family protein1.6e-10282.46Show/hide
Query:  KTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGK
        +TP+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EK PKFYPA+DVKKPL N+R A+ TKLRASITPGTVLIILAGRFKGK
Subjt:  KTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGK

Query:  RVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPLIKS
        RVVFLKQL SGLLLVTGPFKINGVPLRRVNQ+Y I TSTKVDISGV  +KFDDKYF K  +KKKKK EGEFFEAEKEEK  +P  +KDDQKAVD  LIK+
Subjt:  RVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPLIKS

Query:  IDGVPELKAYLAARFSLKAGMKPHELVF
        I+ VPELK YL ARFSLK GMKPHELVF
Subjt:  IDGVPELKAYLAARFSLKAGMKPHELVF

AT1G74060.1 Ribosomal protein L6 family protein3.1e-10181.58Show/hide
Query:  KTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGK
        +T +V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EK PKFYPA+DVKKPL N+R A+  KLRASITPGTVLIILAGRFKGK
Subjt:  KTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGK

Query:  RVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPLIKS
        RVVFLKQL SGLLLVTGPFKINGVPLRRVNQ+Y I TSTKVDISGV  +KFDDKYF K  +KKKKK EGEFFEAEKEEK  +P  +KDDQKAVD  LIK+
Subjt:  RVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPLIKS

Query:  IDGVPELKAYLAARFSLKAGMKPHELVF
        I+ VPELK YL ARFSLK GMKPHELVF
Subjt:  IDGVPELKAYLAARFSLKAGMKPHELVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCCAAAACCCCTAGAGTTACCCGTAACCCGGATCTAATCCGAGGTGTCGGCAAGTACTCCAGGTCTAAGATGTATCACAAGCGAGGTCTTTGGGCCATCAAGGC
CAAAAATGGCGGAGTTTTCCCTCGTCACGATGCGAAGCTGAAAGCCGATGCCCCGGCTGAGAAGTCGCCGAAGTTTTACCCTGCCGATGATGTGAAGAAGCCCCTTGTCA
ACAAGCGCAAGGCCAGGCTCACGAAACTGAGAGCCAGCATTACTCCTGGTACTGTGTTGATAATCCTTGCTGGGAGGTTCAAGGGGAAGAGAGTTGTGTTTTTGAAACAG
CTTCCATCTGGGTTGCTTCTGGTCACTGGCCCTTTCAAGATTAATGGTGTTCCTCTAAGACGGGTGAACCAATCGTACGCCATTGCAACCTCCACCAAAGTAGACATCTC
TGGAGTTAACGCAGAAAAGTTTGATGACAAGTATTTCTCCAAGGAAGTCCAGAAGAAGAAGAAGAAGGGCGAAGGCGAATTTTTCGAGGCCGAGAAAGAGGAGAAAAGTG
CTCTCCCAGCTGACAGGAAGGATGACCAGAAAGCTGTGGATACACCATTGATCAAGTCGATCGACGGGGTACCAGAGTTGAAGGCTTACTTGGCTGCAAGATTTTCCCTC
AAGGCTGGAATGAAACCTCATGAGCTTGTCTTTTAG
mRNA sequenceShow/hide mRNA sequence
TTAGGGTTTCTCTGGCACTTGTCTTCTTTCTGGTTGCGAAGAAGAGCACCGCAGAGATACTGAAATGGCGCCCAAAACCCCTAGAGTTACCCGTAACCCGGATCTAATCC
GAGGTGTCGGCAAGTACTCCAGGTCTAAGATGTATCACAAGCGAGGTCTTTGGGCCATCAAGGCCAAAAATGGCGGAGTTTTCCCTCGTCACGATGCGAAGCTGAAAGCC
GATGCCCCGGCTGAGAAGTCGCCGAAGTTTTACCCTGCCGATGATGTGAAGAAGCCCCTTGTCAACAAGCGCAAGGCCAGGCTCACGAAACTGAGAGCCAGCATTACTCC
TGGTACTGTGTTGATAATCCTTGCTGGGAGGTTCAAGGGGAAGAGAGTTGTGTTTTTGAAACAGCTTCCATCTGGGTTGCTTCTGGTCACTGGCCCTTTCAAGATTAATG
GTGTTCCTCTAAGACGGGTGAACCAATCGTACGCCATTGCAACCTCCACCAAAGTAGACATCTCTGGAGTTAACGCAGAAAAGTTTGATGACAAGTATTTCTCCAAGGAA
GTCCAGAAGAAGAAGAAGAAGGGCGAAGGCGAATTTTTCGAGGCCGAGAAAGAGGAGAAAAGTGCTCTCCCAGCTGACAGGAAGGATGACCAGAAAGCTGTGGATACACC
ATTGATCAAGTCGATCGACGGGGTACCAGAGTTGAAGGCTTACTTGGCTGCAAGATTTTCCCTCAAGGCTGGAATGAAACCTCATGAGCTTGTCTTTTAGATAATGGGTC
TGGTTTTTATTTTTTAGATCATCACCTTGCTTTTTGTTCGTTTGAACATGGCTATGACTTGTGATAGTTGCCTTGTCCCAAATTTTGATTCTAAATAGAGATTCCATGTT
TCGTTAGCTCTGTTTTCTTATTGAATACTGTGTTCATGTTCTTCGTTGGGTCTGTAACACTACTCCGTTACAGAATTTCAGGCTTCAGCCCATCTCATTGATTTAGAGCC
ACCCGAACTCTGATGCAAAGCCATTCAAGATGTGTTTACACTATGAGAAAATATTAAACATGTATGCGTGGATAGACCAAAAAGTATAAAATTCGAAACTTGATGTTCTT
GAGCTGATGGTTTGTCTAATTGTCGTCTCCTTTCAGCTCAATTTGTTTTTAAATTTTTTATTCAATTACAAATTGTCTCTATGGCTTA
Protein sequenceShow/hide protein sequence
MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSPKFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGKRVVFLKQ
LPSGLLLVTGPFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADRKDDQKAVDTPLIKSIDGVPELKAYLAARFSL
KAGMKPHELVF