; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh17G009310 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G009310
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationCmo_Chr17:8289609..8292405
RNA-Seq ExpressionCmoCh17G009310
SyntenyCmoCh17G009310
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575690.1 Nuclear transcription factor Y subunit A-9, partial [Cucurbita argyrosperma subsp. sororia]7.8e-17498.1Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
        MPSKPENVDQQIVDGSKYLVQSTKYS AWWNGVGNN IAGEDATKTASA+YLNDTVSSGGTQSQ NDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
        SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPV EAGSKYM ADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
Subjt:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP

Query:  HESMQVNGAPQRAIP
        HESMQVNGAPQRAIP
Subjt:  HESMQVNGAPQRAIP

KAG7014245.1 Nuclear transcription factor Y subunit A-9 [Cucurbita argyrosperma subsp. argyrosperma]4.1e-17598.11Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
        MPSKPENVDQQIVDGSKYLVQSTKYS AWWNGVGNN IAGEDATKTASA+YLNDTVSSGGTQSQ NDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
        SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPV EAGSKYM ADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
Subjt:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP

Query:  HESMQVNGAPQRAIPIN
        HESMQVNGAPQRAIPIN
Subjt:  HESMQVNGAPQRAIPIN

XP_022953565.1 nuclear transcription factor Y subunit A-4-like isoform X1 [Cucurbita moschata]8.0e-179100Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
        MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
        SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
Subjt:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP

Query:  HESMQVNGAPQRAIPIN
        HESMQVNGAPQRAIPIN
Subjt:  HESMQVNGAPQRAIPIN

XP_022991913.1 nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita maxima]3.6e-17195.9Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
        MPSKPENVDQQ VDGSKYLVQSTKYS AWW+GVGNNTIAGE+ATKTAS DYLNDTVSSGGTQSQ NDENIGKEVQHLKYIPFS SPPVGERLDLNSQMEL
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
        SGGRFLNTKKPNNVISNTDRE+GIN GANH TKPV+EAGSKYM ADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEG HLDQP
Subjt:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP

Query:  HESMQVNGAPQRAIPIN
        HESMQVNGAPQRAIPIN
Subjt:  HESMQVNGAPQRAIPIN

XP_023547827.1 nuclear transcription factor Y subunit A-4-like isoform X2 [Cucurbita pepo subsp. pepo]7.0e-17597.79Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
        MPSKPENVDQQIVDGSKYLVQSTKYS AWW+GVGNNTIAGEDATKTASADYLNDTVSSGGTQSQ NDENIGKEVQHLKYIPFS SPPVGERLDLNSQMEL
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
        SGGRFLNTKKPNNVISNTDREEGINSG NHSTKPV+EAGSKYM ADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
Subjt:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP

Query:  HESMQVNGAPQRAIPIN
        HESMQVNGAPQRAIPIN
Subjt:  HESMQVNGAPQRAIPIN

TrEMBL top hitse value%identityAlignment
A0A0A0K612 Nuclear transcription factor Y subunit1.4e-15285.76Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
        MPS+PENVDQQ+ DG+KYL+QSTK+S  WW+GVGNNTIAGEDA KT+SA+YLN TV+SG TQ Q NDENIGKEVQHLKYIPFS SPPVGE LDLNSQMEL
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQMLTS GPQ+T P IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
        SGGRFLNTKKPNNV+SNT+REE I+S ANHSTKPVSEA SKYM  +E GIK+TL+E+ +EFMTQN+QIT AFFNGK N HG+STY+SQL DVEGGHLDQP
Subjt:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP

Query:  HESMQVNGAPQRAIPI
        HESMQVNGAPQRAIPI
Subjt:  HESMQVNGAPQRAIPI

A0A6J1GNB7 Nuclear transcription factor Y subunit3.9e-179100Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
        MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
        SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
Subjt:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP

Query:  HESMQVNGAPQRAIPIN
        HESMQVNGAPQRAIPIN
Subjt:  HESMQVNGAPQRAIPIN

A0A6J1GNK9 Nuclear transcription factor Y subunit5.3e-16092.43Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
        MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSI                        FPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
        SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
Subjt:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP

Query:  HESMQVNGAPQRAIPIN
        HESMQVNGAPQRAIPIN
Subjt:  HESMQVNGAPQRAIPIN

A0A6J1JU93 Nuclear transcription factor Y subunit2.4e-15288.33Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
        MPSKPENVDQQ VDGSKYLVQSTKYS AWW+GVGNNTIAGE+ATKTAS DYLNDTVSSGGTQSQ NDENIGKEVQHLKYIPFS SPPVGERLDLNSQMEL
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSI                        FPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
        SGGRFLNTKKPNNVISNTDRE+GIN GANH TKPV+EAGSKYM ADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEG HLDQP
Subjt:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP

Query:  HESMQVNGAPQRAIPIN
        HESMQVNGAPQRAIPIN
Subjt:  HESMQVNGAPQRAIPIN

A0A6J1JW53 Nuclear transcription factor Y subunit1.7e-17195.9Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
        MPSKPENVDQQ VDGSKYLVQSTKYS AWW+GVGNNTIAGE+ATKTAS DYLNDTVSSGGTQSQ NDENIGKEVQHLKYIPFS SPPVGERLDLNSQMEL
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
        SGGRFLNTKKPNNVISNTDRE+GIN GANH TKPV+EAGSKYM ADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEG HLDQP
Subjt:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP

Query:  HESMQVNGAPQRAIPIN
        HESMQVNGAPQRAIPIN
Subjt:  HESMQVNGAPQRAIPIN

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-76.7e-2750Show/hide
Query:  HSIVLTSYPFSDAQYCQMLTSNGPQSTFPH--IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        +S+    YP+ D  Y  +        T  H  + G+    +PLP +  EEPV+VNAKQYHGILRRRQSRA+ E + KVIKSRKPYLHESRHLHA+RR RG
Subjt:  HSIVLTSYPFSDAQYCQMLTSNGPQSTFPH--IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGS
         GGRFLN KK +    ++  EE  N  A  S    S   S
Subjt:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGS

Q8VY64 Nuclear transcription factor Y subunit A-41.3e-2541.08Show/hide
Query:  SQGNDENIGKEVQHLKYIPFSASPPVGERLDLNS-QMELVGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIY--------GLHHARMPLPLEMEEEPVY
        S  N+ +  KE    +  P   S    E +D NS   E + H +    YP+ D  Y  +      Q+  PH Y        G+    +PL  +  EEPV+
Subjt:  SQGNDENIGKEVQHLKYIPFSASPPVGERLDLNS-QMELVGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIY--------GLHHARMPLPLEMEEEPVY

Query:  VNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEA
        VNAKQYHGILRRRQSRAK E   + IK++KPY+HESRHLHA+RR RG GGRFLN KK N      D +E   + ++ +T   S +
Subjt:  VNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEA

Q945M9 Nuclear transcription factor Y subunit A-98.4e-3042.86Show/hide
Query:  AGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQM------------ELVGHSI-VLTSYPFSDAQYCQMLTSNG
        AG+ ++K+ +       + S G++S  N +N   +   +   P SA    G+  D N +             +LVGH++   +S P+ D  Y  ++ + G
Subjt:  AGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQM------------ELVGHSI-VLTSYPFSDAQYCQMLTSNG

Query:  --PQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEG
          P    P+  G+ H+RMPLP EM +EPV+VNAKQY  ILRRRQ+RAKAELEKK+IKSRKPYLHESRH HAMRR RG+GGRF   KK N   S    EE 
Subjt:  --PQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEG

Query:  INSGANHSTKPVSEAGS
         N    H T+  S + S
Subjt:  INSGANHSTKPVSEAGS

Q9LXV5 Nuclear transcription factor Y subunit A-16.0e-2835.23Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWW-------------NGVGNNTIA-----GEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPF
        M SKP   +++ V+    + Q   Y+  WW             +G+ +N+ +     G ++    SA    D   +G       D       + +     
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWW-------------NGVGNNTIA-----GEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPF

Query:  SASPPVGERLDLNSQ-----MELVGHSIVLTSYPFSDAQYCQMLTSNGPQST-FPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEK
          + P     +++ Q      ELVGH I     P+ D  Y  ++ + G Q   F    G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE+
Subjt:  SASPPVGERLDLNSQ-----MELVGHSIVLTSYPFSDAQYCQMLTSNGPQST-FPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEK

Query:  KVIKSRKPYLHESRHLHAMRRARGSGGRFLNTK--KPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLN
        KVI+ RKPYLHESRH HAMRRAR SGGRF      +        DRE G  S  N S       GS+ +  D N   +TLN
Subjt:  KVIKSRKPYLHESRHLHAMRRARGSGGRFLNTK--KPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLN

Q9M9X4 Nuclear transcription factor Y subunit A-21.4e-2435.29Show/hide
Query:  AWWNGVGNNTIAGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKY------IPFSASPPVGERLDLNSQMELVGHS--IVLTSYPFSDAQYCQ
        +WW   G+  +A E      S  +    V S G   Q  D+       HL +       P     P G    + S    +G S   + T YP+ + QY  
Subjt:  AWWNGVGNNTIAGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKY------IPFSASPPVGERLDLNSQMELVGHS--IVLTSYPFSDAQYCQ

Query:  MLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE--LEKKVIKS--RKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVI
        ++++ G QS            +PL +E E+  +YVN+KQYHGI+RRRQSRAKA   L++K + S  RKPY+H SRHLHA+RR RGSGGRFLNTK  N   
Subjt:  MLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE--LEKKVIKS--RKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVI

Query:  SNTDREEGINSGANHSTKPVSEAGSK--YMAADENG---IKDTLNEEDKEFMTQN
        S T+ ++G  S    S     ++ S+   +   ENG   + + LN    E  + N
Subjt:  SNTDREEGINSGANHSTKPVSEAGSK--YMAADENG---IKDTLNEEDKEFMTQN

Arabidopsis top hitse value%identityAlignment
AT1G30500.1 nuclear factor Y, subunit A71.6e-2850Show/hide
Query:  HSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSG
        +S+    YP+ D  Y  +     P   +  + G+    +PLP +  EEPV+VNAKQYHGILRRRQSRA+ E + KVIKSRKPYLHESRHLHA+RR RG G
Subjt:  HSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSG

Query:  GRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGS
        GRFLN KK +    ++  EE  N  A  S    S   S
Subjt:  GRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGS

AT3G20910.1 nuclear factor Y, subunit A96.0e-3142.86Show/hide
Query:  AGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQM------------ELVGHSI-VLTSYPFSDAQYCQMLTSNG
        AG+ ++K+ +       + S G++S  N +N   +   +   P SA    G+  D N +             +LVGH++   +S P+ D  Y  ++ + G
Subjt:  AGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQM------------ELVGHSI-VLTSYPFSDAQYCQMLTSNG

Query:  --PQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEG
          P    P+  G+ H+RMPLP EM +EPV+VNAKQY  ILRRRQ+RAKAELEKK+IKSRKPYLHESRH HAMRR RG+GGRF   KK N   S    EE 
Subjt:  --PQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEG

Query:  INSGANHSTKPVSEAGS
         N    H T+  S + S
Subjt:  INSGANHSTKPVSEAGS

AT5G12840.1 nuclear factor Y, subunit A14.3e-2935.23Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWW-------------NGVGNNTIA-----GEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPF
        M SKP   +++ V+    + Q   Y+  WW             +G+ +N+ +     G ++    SA    D   +G       D       + +     
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWW-------------NGVGNNTIA-----GEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPF

Query:  SASPPVGERLDLNSQ-----MELVGHSIVLTSYPFSDAQYCQMLTSNGPQST-FPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEK
          + P     +++ Q      ELVGH I     P+ D  Y  ++ + G Q   F    G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE+
Subjt:  SASPPVGERLDLNSQ-----MELVGHSIVLTSYPFSDAQYCQMLTSNGPQST-FPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEK

Query:  KVIKSRKPYLHESRHLHAMRRARGSGGRFLNTK--KPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLN
        KVI+ RKPYLHESRH HAMRRAR SGGRF      +        DRE G  S  N S       GS+ +  D N   +TLN
Subjt:  KVIKSRKPYLHESRHLHAMRRARGSGGRFLNTK--KPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLN

AT5G12840.2 nuclear factor Y, subunit A12.1e-2835.71Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWW-------------NGVGNNTIA-----GEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPF
        M SKP   +++ V+    + Q   Y+  WW             +G+ +N+ +     G ++    SA    D   +G       D       +   +   
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWW-------------NGVGNNTIA-----GEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPF

Query:  SASPPVGER----LDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSNGPQST-FPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKK
           P +  R      L    ELVGH I     P+ D  Y  ++ + G Q   F    G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE+K
Subjt:  SASPPVGER----LDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSNGPQST-FPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKK

Query:  VIKSRKPYLHESRHLHAMRRARGSGGRFLNTK--KPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLN
        VI+ RKPYLHESRH HAMRRAR SGGRF      +        DRE G  S  N S       GS+ +  D N   +TLN
Subjt:  VIKSRKPYLHESRHLHAMRRARGSGGRFLNTK--KPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLN

AT5G12840.3 nuclear factor Y, subunit A14.3e-2935.23Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWW-------------NGVGNNTIA-----GEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPF
        M SKP   +++ V+    + Q   Y+  WW             +G+ +N+ +     G ++    SA    D   +G       D       + +     
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSGAWW-------------NGVGNNTIA-----GEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPF

Query:  SASPPVGERLDLNSQ-----MELVGHSIVLTSYPFSDAQYCQMLTSNGPQST-FPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEK
          + P     +++ Q      ELVGH I     P+ D  Y  ++ + G Q   F    G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE+
Subjt:  SASPPVGERLDLNSQ-----MELVGHSIVLTSYPFSDAQYCQMLTSNGPQST-FPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEK

Query:  KVIKSRKPYLHESRHLHAMRRARGSGGRFLNTK--KPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLN
        KVI+ RKPYLHESRH HAMRRAR SGGRF      +        DRE G  S  N S       GS+ +  D N   +TLN
Subjt:  KVIKSRKPYLHESRHLHAMRRARGSGGRFLNTK--KPNNVISNTDREEGINSGANHSTKPVSEAGSKYMAADENGIKDTLN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATCAAAACCAGAAAATGTAGACCAACAAATAGTTGATGGGTCGAAGTATTTGGTACAATCGACCAAATACTCGGGCGCTTGGTGGAATGGAGTTGGGAACAATAC
CATCGCAGGTGAAGATGCTACCAAAACAGCTTCTGCAGATTACCTGAACGATACTGTTAGCAGTGGAGGAACGCAGTCACAAGGAAATGATGAAAATATTGGGAAAGAAG
TTCAGCATCTCAAGTACATTCCGTTTTCTGCATCCCCACCTGTGGGCGAACGCCTTGATCTAAATTCCCAGATGGAACTTGTTGGCCACTCAATTGTTTTGACATCATAT
CCTTTTTCAGATGCACAATATTGCCAAATGCTGACTTCTAATGGACCACAGTCCACGTTTCCTCATATTTATGGACTTCACCATGCTAGGATGCCTTTACCCCTTGAAAT
GGAAGAAGAACCCGTTTATGTAAATGCAAAGCAATATCATGGTATCCTGAGGAGAAGACAGTCGCGTGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAAAAGTAGAAAGC
CATATCTTCATGAATCCAGACACCTCCATGCTATGAGACGAGCAAGAGGCAGTGGAGGACGTTTCCTCAATACCAAAAAGCCCAACAATGTTATTTCCAATACAGATAGG
GAGGAAGGCATCAATTCTGGTGCAAACCATTCAACAAAACCTGTCAGCGAGGCTGGATCAAAGTACATGGCGGCTGATGAAAATGGAATCAAGGATACGCTTAACGAGGA
GGACAAAGAGTTCATGACTCAAAATCTGCAGATAACACGTGCTTTCTTCAACGGAAAATTGAATGGCCATGGCATATCCACTTACACTTCACAACTTGCTGACGTCGAGG
GAGGTCATCTCGATCAGCCACATGAAAGCATGCAGGTGAATGGGGCTCCACAGAGGGCCATCCCCATCAATTGA
mRNA sequenceShow/hide mRNA sequence
TTTCTTAATTCAATAATTTTTAATTTTAAAGTTTTTGCTCTTCTCATTTTTAATTTCCTTCTCTCTGTCGTATTCCATAGCCACTGCAGCGAGCGAGCGAGGTAGAGAGA
GAGAGAGAGAGAGAGAGTCATGGAACTGAGCTAGAAGACCAGAGAGACCTTCAACCTAAAGCTCCCTAGGGTACGATCGTCTCTTTCGTAATCACATCGCAGTTGATAAG
TTTTGAACGATGCCATCAAAACCAGAAAATGTAGACCAACAAATAGTTGATGGGTCGAAGTATTTGGTACAATCGACCAAATACTCGGGCGCTTGGTGGAATGGAGTTGG
GAACAATACCATCGCAGGTGAAGATGCTACCAAAACAGCTTCTGCAGATTACCTGAACGATACTGTTAGCAGTGGAGGAACGCAGTCACAAGGAAATGATGAAAATATTG
GGAAAGAAGTTCAGCATCTCAAGTACATTCCGTTTTCTGCATCCCCACCTGTGGGCGAACGCCTTGATCTAAATTCCCAGATGGAACTTGTTGGCCACTCAATTGTTTTG
ACATCATATCCTTTTTCAGATGCACAATATTGCCAAATGCTGACTTCTAATGGACCACAGTCCACGTTTCCTCATATTTATGGACTTCACCATGCTAGGATGCCTTTACC
CCTTGAAATGGAAGAAGAACCCGTTTATGTAAATGCAAAGCAATATCATGGTATCCTGAGGAGAAGACAGTCGCGTGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAAAA
GTAGAAAGCCATATCTTCATGAATCCAGACACCTCCATGCTATGAGACGAGCAAGAGGCAGTGGAGGACGTTTCCTCAATACCAAAAAGCCCAACAATGTTATTTCCAAT
ACAGATAGGGAGGAAGGCATCAATTCTGGTGCAAACCATTCAACAAAACCTGTCAGCGAGGCTGGATCAAAGTACATGGCGGCTGATGAAAATGGAATCAAGGATACGCT
TAACGAGGAGGACAAAGAGTTCATGACTCAAAATCTGCAGATAACACGTGCTTTCTTCAACGGAAAATTGAATGGCCATGGCATATCCACTTACACTTCACAACTTGCTG
ACGTCGAGGGAGGTCATCTCGATCAGCCACATGAAAGCATGCAGGTGAATGGGGCTCCACAGAGGGCCATCCCCATCAATTGA
Protein sequenceShow/hide protein sequence
MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGGTQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMELVGHSIVLTSY
PFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDR
EEGINSGANHSTKPVSEAGSKYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQPHESMQVNGAPQRAIPIN