; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh17G009560 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G009560
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr17:8435101..8436631
RNA-Seq ExpressionCmoCh17G009560
SyntenyCmoCh17G009560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACL53534.1 unknown [Zea mays]3.1e-1630.17Show/hide
Query:  QVQNSDFSRILKGLSKWNLRQAAAQAAGIHPKGNHTHIVKRQSQKNILQVHRRPPSQEILQHCFQPRVHELHQRLHRHLSEPRRVKLNAGHLPLSLPRLI
        + +      +L+   + +L +A A+AA +H + +H H+V+ ++++++L+V          QH  Q  VH+LH+R  R  +E  RV+L AG   L  PRL+
Subjt:  QVQNSDFSRILKGLSKWNLRQAAAQAAGIHPKGNHTHIVKRQSQKNILQVHRRPPSQEILQHCFQPRVHELHQRLHRHLSEPRRVKLNAGHLPLSLPRLI

Query:  VSPEYSITEKVSHRVAEEWPFRVGRKFGLEKVLQVSGISSDYTIETTKPRASKLKRTLMMTEEVSNPFVEIPTCCCDQR
        V  E ++ ++V HRVAE        + GLE+VLQV+ +   + +E  +PR  + +R     +   +P V +     +QR
Subjt:  VSPEYSITEKVSHRVAEEWPFRVGRKFGLEKVLQVSGISSDYTIETTKPRASKLKRTLMMTEEVSNPFVEIPTCCCDQR

CAA7391099.1 unnamed protein product [Spirodela intermedia]2.2e-0965.62Show/hide
Query:  SDRILSSTSGFRSSNQKNQLNATEDVSLPASMKLTQISLRNLSENGRRCSSLSLINTVGSLVLG
        S RI SST G R S+QKNQ +ATE+VSLPA MKLTQ+SLRNLSE G   SSLSL+  V    LG
Subjt:  SDRILSSTSGFRSSNQKNQLNATEDVSLPASMKLTQISLRNLSENGRRCSSLSLINTVGSLVLG

KAG6575716.1 hypothetical protein SDJN03_26355, partial [Cucurbita argyrosperma subsp. sororia]4.2e-2159.48Show/hide
Query:  ESFRLGIHRPPRPESDRILSSTSGFRSSNQKNQLNATEDVSLPASMKLTQISLRNLSENGRRCSSLSLINTVGSLVLGLRLRRRGEFSLPCLNHVLCKFV
        ESFRLGIHRPPRPESD                   A+E  +   S+ L    L N +E+ R        + VGSLVLGLRLRRRGEFSLPCLNHVLCKFV
Subjt:  ESFRLGIHRPPRPESDRILSSTSGFRSSNQKNQLNATEDVSLPASMKLTQISLRNLSENGRRCSSLSLINTVGSLVLGLRLRRRGEFSLPCLNHVLCKFV

Query:  DGLYRLLQLLLHSQVQ
        DGLYRLLQLLLHSQVQ
Subjt:  DGLYRLLQLLLHSQVQ

TrEMBL top hitse value%identityAlignment
A0A7I8K275 Hypothetical protein1.0e-0965.62Show/hide
Query:  SDRILSSTSGFRSSNQKNQLNATEDVSLPASMKLTQISLRNLSENGRRCSSLSLINTVGSLVLG
        S RI SST G R S+QKNQ +ATE+VSLPA MKLTQ+SLRNLSE G   SSLSL+  V    LG
Subjt:  SDRILSSTSGFRSSNQKNQLNATEDVSLPASMKLTQISLRNLSENGRRCSSLSLINTVGSLVLG

B8A035 Uncharacterized protein1.5e-1630.17Show/hide
Query:  QVQNSDFSRILKGLSKWNLRQAAAQAAGIHPKGNHTHIVKRQSQKNILQVHRRPPSQEILQHCFQPRVHELHQRLHRHLSEPRRVKLNAGHLPLSLPRLI
        + +      +L+   + +L +A A+AA +H + +H H+V+ ++++++L+V          QH  Q  VH+LH+R  R  +E  RV+L AG   L  PRL+
Subjt:  QVQNSDFSRILKGLSKWNLRQAAAQAAGIHPKGNHTHIVKRQSQKNILQVHRRPPSQEILQHCFQPRVHELHQRLHRHLSEPRRVKLNAGHLPLSLPRLI

Query:  VSPEYSITEKVSHRVAEEWPFRVGRKFGLEKVLQVSGISSDYTIETTKPRASKLKRTLMMTEEVSNPFVEIPTCCCDQR
        V  E ++ ++V HRVAE        + GLE+VLQV+ +   + +E  +PR  + +R     +   +P V +     +QR
Subjt:  VSPEYSITEKVSHRVAEEWPFRVGRKFGLEKVLQVSGISSDYTIETTKPRASKLKRTLMMTEEVSNPFVEIPTCCCDQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCCTTCACCACCGCCACCCGGTACCGGCTGATGATCGAGGCGGCGACGTATTTCATTTGATAGTACGCGAAATCCCTTCCCAGACACAGCCGAGGACCGCCGTTGA
AGGCGAATCGTTCCGTCTGGGAATACATCGTCCTCCACGACCTGAATCGGACAGAATTTTGTCCTCCACGTCGGGATTTCGATCGAGCAACCAGAAGAACCAACTCAATG
CGACGGAAGACGTGTCTCTTCCGGCGAGTATGAAATTGACGCAAATATCTCTGAGAAACTTGTCGGAGAATGGCCGCCGTTGCTCGTCTCTTAGCCTCATAAATACGGTC
GGATCTTTGGTTCTCGGCTTGCGGTTGCGCCGTCGTGGAGAGTTCTCTCTTCCGTGTTTGAATCACGTCCTCTGCAAATTCGTCGACGGCTTGTATCGATTGCTTCAGCT
TCTTCTCCACTCCCAAGTTCAGAACAGTGACTTCAGTCGCATCCTCAAAGGCCTTAGCAAATGGAATCTCCGGCAAGCCGCCGCGCAAGCAGCCGGGATCCACCCCAAAG
GCAATCATACACACATTGTCAAACGTCAATCTCAGAAGAACATCCTGCAGGTCCACCGCCGTCCTCCGTCCCAGGAAATCCTCCAACACTGTTTCCAACCTCGAGTGCAC
GAGCTCCACCAGCGACTCCACCGTCATCTGTCGGAACCTCGCCGAGTGAAACTCAATGCTGGCCACCTTCCTCTGTCGTTGCCACGTCTCATCGTCAGCCCCGAATATTC
CATCACCGAGAAGGTCTCTCACCGTGTCGCGGAAGAATGGCCCTTTAGGGTAGGAAGGAAATTTGGTCTTGAGAAGGTGCTCCAAGTTTCGGGGATCAGCAGTGACTACA
CAATTGAGACTACTAAACCACGGGCCTCGAAATTGAAACGTACCCTTATGATGACGGAGGAGGTCAGTAATCCATTCGTAGAGATTCCCACGTGCTGCTGTGATCAGAGA
TGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCCTTCACCACCGCCACCCGGTACCGGCTGATGATCGAGGCGGCGACGTATTTCATTTGATAGTACGCGAAATCCCTTCCCAGACACAGCCGAGGACCGCCGTTGA
AGGCGAATCGTTCCGTCTGGGAATACATCGTCCTCCACGACCTGAATCGGACAGAATTTTGTCCTCCACGTCGGGATTTCGATCGAGCAACCAGAAGAACCAACTCAATG
CGACGGAAGACGTGTCTCTTCCGGCGAGTATGAAATTGACGCAAATATCTCTGAGAAACTTGTCGGAGAATGGCCGCCGTTGCTCGTCTCTTAGCCTCATAAATACGGTC
GGATCTTTGGTTCTCGGCTTGCGGTTGCGCCGTCGTGGAGAGTTCTCTCTTCCGTGTTTGAATCACGTCCTCTGCAAATTCGTCGACGGCTTGTATCGATTGCTTCAGCT
TCTTCTCCACTCCCAAGTTCAGAACAGTGACTTCAGTCGCATCCTCAAAGGCCTTAGCAAATGGAATCTCCGGCAAGCCGCCGCGCAAGCAGCCGGGATCCACCCCAAAG
GCAATCATACACACATTGTCAAACGTCAATCTCAGAAGAACATCCTGCAGGTCCACCGCCGTCCTCCGTCCCAGGAAATCCTCCAACACTGTTTCCAACCTCGAGTGCAC
GAGCTCCACCAGCGACTCCACCGTCATCTGTCGGAACCTCGCCGAGTGAAACTCAATGCTGGCCACCTTCCTCTGTCGTTGCCACGTCTCATCGTCAGCCCCGAATATTC
CATCACCGAGAAGGTCTCTCACCGTGTCGCGGAAGAATGGCCCTTTAGGGTAGGAAGGAAATTTGGTCTTGAGAAGGTGCTCCAAGTTTCGGGGATCAGCAGTGACTACA
CAATTGAGACTACTAAACCACGGGCCTCGAAATTGAAACGTACCCTTATGATGACGGAGGAGGTCAGTAATCCATTCGTAGAGATTCCCACGTGCTGCTGTGATCAGAGA
TGGTAA
Protein sequenceShow/hide protein sequence
MPLHHRHPVPADDRGGDVFHLIVREIPSQTQPRTAVEGESFRLGIHRPPRPESDRILSSTSGFRSSNQKNQLNATEDVSLPASMKLTQISLRNLSENGRRCSSLSLINTV
GSLVLGLRLRRRGEFSLPCLNHVLCKFVDGLYRLLQLLLHSQVQNSDFSRILKGLSKWNLRQAAAQAAGIHPKGNHTHIVKRQSQKNILQVHRRPPSQEILQHCFQPRVH
ELHQRLHRHLSEPRRVKLNAGHLPLSLPRLIVSPEYSITEKVSHRVAEEWPFRVGRKFGLEKVLQVSGISSDYTIETTKPRASKLKRTLMMTEEVSNPFVEIPTCCCDQR
W