; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh17G010130 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G010130
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionMultidrug resistance protein ABC transporter family protein, putative
Genome locationCmo_Chr17:8690516..8691301
RNA-Seq ExpressionCmoCh17G010130
SyntenyCmoCh17G010130
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575773.1 hypothetical protein SDJN03_26412, partial [Cucurbita argyrosperma subsp. sororia]2.6e-9595.36Show/hide
Query:  MGNVTSVSGVGKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVTEKRPTPLPADLKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRS
        MGNVTSVSGVGK+VLS+GSIHEFNEPLTVAELMLEHPRHVVVELRSS + EKRPTPLPADLKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRS
Subjt:  MGNVTSVSGVGKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVTEKRPTPLPADLKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRS

Query:  RSLLLSSSKVLPWLARARSATTPTTTGAVGVDVKKKDLTMIGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF
        RSLLLSSSKVLPWLARARSATTPT TGAVGVDVKK+D T IGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF
Subjt:  RSLLLSSSKVLPWLARARSATTPTTTGAVGVDVKKKDLTMIGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF

KAG7014321.1 hypothetical protein SDJN02_24498, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-9696.39Show/hide
Query:  MGNVTSVSGVGKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVTEKRPTPLPADLKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRS
        MGNVTSVSGVGK+VLS+GSIHEFNEPLTVAELMLEHPRHVVVELRSS V EKRPTPLPAD+KLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRS
Subjt:  MGNVTSVSGVGKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVTEKRPTPLPADLKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRS

Query:  RSLLLSSSKVLPWLARARSATTPTTTGAVGVDVKKKDLTMIGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF
        RSLLLSSSKVLPWLARARSATTPTTTGAVGVDVKKKD T IGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF
Subjt:  RSLLLSSSKVLPWLARARSATTPTTTGAVGVDVKKKDLTMIGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF

XP_022953412.1 uncharacterized protein LOC111455974 [Cucurbita moschata]4.5e-100100Show/hide
Query:  MGNVTSVSGVGKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVTEKRPTPLPADLKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRS
        MGNVTSVSGVGKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVTEKRPTPLPADLKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRS
Subjt:  MGNVTSVSGVGKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVTEKRPTPLPADLKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRS

Query:  RSLLLSSSKVLPWLARARSATTPTTTGAVGVDVKKKDLTMIGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF
        RSLLLSSSKVLPWLARARSATTPTTTGAVGVDVKKKDLTMIGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF
Subjt:  RSLLLSSSKVLPWLARARSATTPTTTGAVGVDVKKKDLTMIGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF

XP_022991521.1 uncharacterized protein LOC111488113 [Cucurbita maxima]1.7e-9193.3Show/hide
Query:  MGNVTSVSGVGKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVTEKRPTPLPADLKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRS
        MGNVTSVSGVGK+VLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSS V EKRPTPLPADLKLDLKKVYMMLPIRGGKP+SLSSEEIR V+LCANSALRS
Subjt:  MGNVTSVSGVGKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVTEKRPTPLPADLKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRS

Query:  RSLLLSSSKVLPWLARARSATTPTTTGAVGVDVKKKDLTMIGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF
        RSLLLSSSKVLPWLARARSA    TTGAVGVDVKKKD T IGEEMRWETEM MAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF
Subjt:  RSLLLSSSKVLPWLARARSATTPTTTGAVGVDVKKKDLTMIGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF

XP_023549016.1 uncharacterized protein LOC111807502 [Cucurbita pepo subsp. pepo]1.1e-9092.78Show/hide
Query:  MGNVTSVSGVGKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVTEKRPTPLPADLKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRS
        MGNVTSVSGVGK+VLS+GSIHEFNEPLTVAELMLEHPRHVVVELRSS V EKRPTPLPADLKLDLKKVYMMLPIRGGKPVSLSSEEIRRV+LCANSALRS
Subjt:  MGNVTSVSGVGKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVTEKRPTPLPADLKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRS

Query:  RSLLLSSSKVLPWLARARSATTPTTTGAVGVDVKKKDLTMIGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF
        RSLLLSSSKVLPWLARARS    TTT AVGVDVKK+D T IGEEMRWETEMAMA EGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF
Subjt:  RSLLLSSSKVLPWLARARSATTPTTTGAVGVDVKKKDLTMIGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF

TrEMBL top hitse value%identityAlignment
A0A0A0K6C6 Uncharacterized protein5.8e-6975.5Show/hide
Query:  MGNVTS-VSGVGKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVTEKRPTPLPADLKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALR
        MGNVTS VSGVGK+VLS+GSI EFNEP TVAELMLEHPR VVVE+  S V  KRPTPLPAD KL+  KVYMMLPIRGGKP SLSSE+IRRV+LCANSALR
Subjt:  MGNVTS-VSGVGKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVTEKRPTPLPADLKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALR

Query:  SRSLLLSSSKVLPWLARARSATT---PTTTGAVGVDVKKK--DLTMIGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF
        SRSLLLSSSKVLPW ARA +ATT    TTT     D KK+   + M GEE+ WET      EGRPEYLSRQLSG+ WKPSLDTIKEKKFEKKLSHWLFKF
Subjt:  SRSLLLSSSKVLPWLARARSATT---PTTTGAVGVDVKKK--DLTMIGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF

A0A1S3BSP6 uncharacterized protein LOC1034927638.4e-6874.5Show/hide
Query:  MGNVTS-VSGVGKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVTEKRPTPLPADLKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALR
        MGNVTS VSGVGK+VLS+GSI EFNEP TVAELMLEHPR VVVE+  S V  KRPTPLPAD KL+  KVYMMLPIRGGKP SLSSE+IRRV+LCANSALR
Subjt:  MGNVTS-VSGVGKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVTEKRPTPLPADLKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALR

Query:  SRSLLLSSSKVLPWLARARSAT---TPTTTGAVGVDVKKK--DLTMIGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF
        SRSLLLSSSKVLPW ARA +AT   T TTT     ++KK+   + M GEE+ WET     AEGRPEYLSRQLSG+ WKPSLDTIKEKK EKKLSHWLF F
Subjt:  SRSLLLSSSKVLPWLARARSAT---TPTTTGAVGVDVKKK--DLTMIGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF

A0A6J1DD99 uncharacterized protein LOC1110199772.2e-6873.2Show/hide
Query:  MGNVTSVSGVGKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVTEKRPTPLPADLKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRS
        MGN TS SG GK+VLSDGS+ E NE LT AELMLEHPR VVVE+  S +  KRPT LPAD KLDLKKVY+MLPIRGGKP SLSSEEIRR++LC NS LR 
Subjt:  MGNVTSVSGVGKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVTEKRPTPLPADLKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRS

Query:  RSLLLSSSKVLPWLARARSATTPTTTGAVGVDVKKKDLTMIGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF
         SL  SSSKVLPW AR  + TT TT G  GV +KK D    GEE RWETE  MAAEGRPEYLSRQ SG+ WKPSLDTIKEKKFEKK+SHWLFKF
Subjt:  RSLLLSSSKVLPWLARARSATTPTTTGAVGVDVKKKDLTMIGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF

A0A6J1GN59 uncharacterized protein LOC1114559742.2e-100100Show/hide
Query:  MGNVTSVSGVGKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVTEKRPTPLPADLKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRS
        MGNVTSVSGVGKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVTEKRPTPLPADLKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRS
Subjt:  MGNVTSVSGVGKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVTEKRPTPLPADLKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRS

Query:  RSLLLSSSKVLPWLARARSATTPTTTGAVGVDVKKKDLTMIGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF
        RSLLLSSSKVLPWLARARSATTPTTTGAVGVDVKKKDLTMIGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF
Subjt:  RSLLLSSSKVLPWLARARSATTPTTTGAVGVDVKKKDLTMIGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF

A0A6J1JQZ4 uncharacterized protein LOC1114881138.4e-9293.3Show/hide
Query:  MGNVTSVSGVGKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVTEKRPTPLPADLKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRS
        MGNVTSVSGVGK+VLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSS V EKRPTPLPADLKLDLKKVYMMLPIRGGKP+SLSSEEIR V+LCANSALRS
Subjt:  MGNVTSVSGVGKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVTEKRPTPLPADLKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRS

Query:  RSLLLSSSKVLPWLARARSATTPTTTGAVGVDVKKKDLTMIGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF
        RSLLLSSSKVLPWLARARSA    TTGAVGVDVKKKD T IGEEMRWETEM MAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF
Subjt:  RSLLLSSSKVLPWLARARSATTPTTTGAVGVDVKKKDLTMIGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02090.1 unknown protein1.3e-2539.38Show/hide
Query:  GKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVT--------EKRPTPLPADLKLDLKKVYMMLPIR--GGKPVS-----LSSEEIRRVILCAN
        GK+VLSDG +    E  TVAE+MLE+P+HVVVE   S+++        +++  PLPAD  L+  K+Y++LP +  GG+        L+SEE+R+++  A 
Subjt:  GKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVT--------EKRPTPLPADLKLDLKKVYMMLPIR--GGKPVS-----LSSEEIRRVILCAN

Query:  SALRSRSLLLSSSKVLPWL-ARARSATTPTTTGAVGVDVKKKDLTMIGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKL
        + +RS         +LPW   R+     P T   V         T +G       E  M  E RPE+LSRQLSG+ WKPSLD I+EKK +KK+
Subjt:  SALRSRSLLLSSSKVLPWL-ARARSATTPTTTGAVGVDVKKKDLTMIGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAACGTCACCTCCGTATCCGGCGTCGGCAAACTCGTCCTCTCCGATGGTTCCATTCACGAATTCAACGAGCCCTTGACAGTGGCCGAGTTGATGCTCGAACACCC
ACGTCACGTTGTCGTCGAGCTCCGCTCGAGTGCCGTCACTGAAAAACGGCCGACTCCATTGCCAGCCGACCTAAAGCTCGATCTGAAAAAGGTTTATATGATGCTACCTA
TAAGAGGAGGCAAGCCAGTGTCATTGTCGTCGGAGGAAATCCGCCGCGTTATCCTCTGCGCCAACTCGGCTTTACGGTCGCGTTCTCTCCTCCTATCTTCTTCCAAGGTT
CTTCCTTGGTTGGCAAGGGCACGCTCGGCAACAACCCCGACAACGACGGGGGCAGTCGGAGTGGATGTTAAAAAGAAAGATCTCACAATGATCGGAGAGGAAATGAGATG
GGAAACCGAGATGGCGATGGCGGCGGAGGGGAGGCCGGAGTATTTGAGCAGACAATTATCCGGCAAAGCTTGGAAACCAAGCTTGGATACAATTAAGGAGAAGAAATTTG
AGAAGAAACTTTCTCATTGGTTGTTCAAATTTTAA
mRNA sequenceShow/hide mRNA sequence
CCCTCCTCCTCACCTCCGACCACTCTCCGATGGGCAACGTCACCTCCGTATCCGGCGTCGGCAAACTCGTCCTCTCCGATGGTTCCATTCACGAATTCAACGAGCCCTTG
ACAGTGGCCGAGTTGATGCTCGAACACCCACGTCACGTTGTCGTCGAGCTCCGCTCGAGTGCCGTCACTGAAAAACGGCCGACTCCATTGCCAGCCGACCTAAAGCTCGA
TCTGAAAAAGGTTTATATGATGCTACCTATAAGAGGAGGCAAGCCAGTGTCATTGTCGTCGGAGGAAATCCGCCGCGTTATCCTCTGCGCCAACTCGGCTTTACGGTCGC
GTTCTCTCCTCCTATCTTCTTCCAAGGTTCTTCCTTGGTTGGCAAGGGCACGCTCGGCAACAACCCCGACAACGACGGGGGCAGTCGGAGTGGATGTTAAAAAGAAAGAT
CTCACAATGATCGGAGAGGAAATGAGATGGGAAACCGAGATGGCGATGGCGGCGGAGGGGAGGCCGGAGTATTTGAGCAGACAATTATCCGGCAAAGCTTGGAAACCAAG
CTTGGATACAATTAAGGAGAAGAAATTTGAGAAGAAACTTTCTCATTGGTTGTTCAAATTTTAAAGGCATTTGGAAGACACCAAGCTTTCATATATGATCCAAATAGTTA
ATATTATAATGTTATAGAACGTCGAGATCGTGTTAATCTTGTACGTACGGT
Protein sequenceShow/hide protein sequence
MGNVTSVSGVGKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVTEKRPTPLPADLKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRSRSLLLSSSKV
LPWLARARSATTPTTTGAVGVDVKKKDLTMIGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTIKEKKFEKKLSHWLFKF