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CmoCh17G010430 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G010430
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionMitochondrial transcription factor 1
Genome locationCmo_Chr17:8834834..8835529
RNA-Seq ExpressionCmoCh17G010430
SyntenyCmoCh17G010430
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER48275.1 mitochondrial transcription factor 1 [Striga asiatica]3.3e-0750.6Show/hide
Query:  AHVLILTPLVVLKRVQFCTKTSNTLLSVLYLPKLPTLMPCPGPQVILVTVTFSQLWPIETQSSPVPMTPLEMLINVEVLSYVW
        AHVLILTP  V  +VQF   TS T  S  Y P+LP L+PCPGP    VT T     PI+TQSSPVP+  +E +I V +   +W
Subjt:  AHVLILTPLVVLKRVQFCTKTSNTLLSVLYLPKLPTLMPCPGPQVILVTVTFSQLWPIETQSSPVPMTPLEMLINVEVLSYVW

PIN11476.1 hypothetical protein CDL12_15921 [Handroanthus impetiginosus]5.8e-0448Show/hide
Query:  HVLILTPLVVLKRVQFCTKTSNTLLSVLYLPKLPTLMPCPGPQVILVTVTFSQLWPIETQSSPVPMTPLEMLINV
        HV IL PL V  +VQF T    T  S  +LP+LP L+P PGP +           P+E QSSPVPMT   MLI V
Subjt:  HVLILTPLVVLKRVQFCTKTSNTLLSVLYLPKLPTLMPCPGPQVILVTVTFSQLWPIETQSSPVPMTPLEMLINV

RRT61404.1 hypothetical protein B296_00021546 [Ensete ventricosum]1.8e-0540Show/hide
Query:  PAHVLILTPLVVLKRVQFCTKTSNTLLSVLYLPKLPT---------------------------LMPCPGPQVILVTVTFSQLWPIETQSSPVPM-TPLE
        P HVLI TPLVV   VQF T T +T  S +YLP+LPT                           LMP PGPQV          WPIE QSSPVPM  P++
Subjt:  PAHVLILTPLVVLKRVQFCTKTSNTLLSVLYLPKLPT---------------------------LMPCPGPQVILVTVTFSQLWPIETQSSPVPM-TPLE

Query:  MLINVEVLSYVWKSLALVVG
        M ++ ++L ++   L L  G
Subjt:  MLINVEVLSYVWKSLALVVG

RWW01082.1 hypothetical protein GW17_00035898 [Ensete ventricosum]1.8e-0540Show/hide
Query:  PAHVLILTPLVVLKRVQFCTKTSNTLLSVLYLPKLPT---------------------------LMPCPGPQVILVTVTFSQLWPIETQSSPVPM-TPLE
        P HVLI TPLVV   VQF T T +T  S +YLP+LPT                           LMP PGPQV          WPIE QSSPVPM  P++
Subjt:  PAHVLILTPLVVLKRVQFCTKTSNTLLSVLYLPKLPT---------------------------LMPCPGPQVILVTVTFSQLWPIETQSSPVPM-TPLE

Query:  MLINVEVLSYVWKSLALVVG
        M ++ ++L ++   L L  G
Subjt:  MLINVEVLSYVWKSLALVVG

RZS22268.1 hypothetical protein BHM03_00055014 [Ensete ventricosum]1.8e-0540Show/hide
Query:  PAHVLILTPLVVLKRVQFCTKTSNTLLSVLYLPKLPT---------------------------LMPCPGPQVILVTVTFSQLWPIETQSSPVPM-TPLE
        P HVLI TPLVV   VQF T T +T  S +YLP+LPT                           LMP PGPQV          WPIE QSSPVPM  P++
Subjt:  PAHVLILTPLVVLKRVQFCTKTSNTLLSVLYLPKLPT---------------------------LMPCPGPQVILVTVTFSQLWPIETQSSPVPM-TPLE

Query:  MLINVEVLSYVWKSLALVVG
        M ++ ++L ++   L L  G
Subjt:  MLINVEVLSYVWKSLALVVG

TrEMBL top hitse value%identityAlignment
A0A426ZBR6 Uncharacterized protein8.7e-0640Show/hide
Query:  PAHVLILTPLVVLKRVQFCTKTSNTLLSVLYLPKLPT---------------------------LMPCPGPQVILVTVTFSQLWPIETQSSPVPM-TPLE
        P HVLI TPLVV   VQF T T +T  S +YLP+LPT                           LMP PGPQV          WPIE QSSPVPM  P++
Subjt:  PAHVLILTPLVVLKRVQFCTKTSNTLLSVLYLPKLPT---------------------------LMPCPGPQVILVTVTFSQLWPIETQSSPVPM-TPLE

Query:  MLINVEVLSYVWKSLALVVG
        M ++ ++L ++   L L  G
Subjt:  MLINVEVLSYVWKSLALVVG

A0A444DSG5 Uncharacterized protein8.7e-0640Show/hide
Query:  PAHVLILTPLVVLKRVQFCTKTSNTLLSVLYLPKLPT---------------------------LMPCPGPQVILVTVTFSQLWPIETQSSPVPM-TPLE
        P HVLI TPLVV   VQF T T +T  S +YLP+LPT                           LMP PGPQV          WPIE QSSPVPM  P++
Subjt:  PAHVLILTPLVVLKRVQFCTKTSNTLLSVLYLPKLPT---------------------------LMPCPGPQVILVTVTFSQLWPIETQSSPVPM-TPLE

Query:  MLINVEVLSYVWKSLALVVG
        M ++ ++L ++   L L  G
Subjt:  MLINVEVLSYVWKSLALVVG

A0A5A7QSC8 Mitochondrial transcription factor 11.6e-0750.6Show/hide
Query:  AHVLILTPLVVLKRVQFCTKTSNTLLSVLYLPKLPTLMPCPGPQVILVTVTFSQLWPIETQSSPVPMTPLEMLINVEVLSYVW
        AHVLILTP  V  +VQF   TS T  S  Y P+LP L+PCPGP    VT T     PI+TQSSPVP+  +E +I V +   +W
Subjt:  AHVLILTPLVVLKRVQFCTKTSNTLLSVLYLPKLPTLMPCPGPQVILVTVTFSQLWPIETQSSPVPMTPLEMLINVEVLSYVW

A0A6N2MID2 Uncharacterized protein2.5e-0560.38Show/hide
Query:  VQFCTKTSNTLLSVLYLPKLPTLMPCPGPQVILVTVTFSQLWPIETQSSPVPM
        VQF T    T  S+ YLPKLPTLMPCPGP V  VT + S   P E QSSPVP+
Subjt:  VQFCTKTSNTLLSVLYLPKLPTLMPCPGPQVILVTVTFSQLWPIETQSSPVPM

A0A6N2MR69 Uncharacterized protein8.7e-0633.07Show/hide
Query:  SKVILMADPVTRPAHVLILTPLVVLKRVQFCTKTSNTLLSVLYLPKLPTLMPCPGPQVILVTVTFSQLWPIETQSSPVPMTPLEMLI-------NVEVLS
        SK +L A P  +  H  ILTP  V + VQF T    T  S+ YLPKLPTLMPCPGP V  VT   S    +E +   +    +++L        +  ++ 
Subjt:  SKVILMADPVTRPAHVLILTPLVVLKRVQFCTKTSNTLLSVLYLPKLPTLMPCPGPQVILVTVTFSQLWPIETQSSPVPMTPLEMLI-------NVEVLS

Query:  YVWKSLALVVGLAVIVGPRGGALAVKN
        Y W++  + +       P   +L +K+
Subjt:  YVWKSLALVVGLAVIVGPRGGALAVKN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTCGAAGGTTATTCTCATGGCCGACCCCGTCACAAGGCCCGCCCATGTCTTGATTCTGACACCATTGGTGGTGTTGAAAAGGGTGCAATTTTGCACCAAAACGTC
CAACACACTTCTCTCTGTTTTATACTTGCCCAAGCTACCGACACTGATGCCATGTCCAGGGCCACAAGTGATATTGGTGACGGTGACTTTCTCACAACTATGGCCAATAG
AGACACAATCATCACCGGTGCCAATGACGCCGTTAGAGATGCTGATCAATGTTGAGGTGCTAAGTTACGTTTGGAAGAGCCTGGCACTTGTTGTTGGTCTTGCAGTCATT
GTAGGGCCACGCGGCGGCGCCTTGGCCGTCAAAAACGCCGGAGCCGGTGAGTATGAAGCCGATTATGTCTTCGATGGAGATCCATTCAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTCGAAGGTTATTCTCATGGCCGACCCCGTCACAAGGCCCGCCCATGTCTTGATTCTGACACCATTGGTGGTGTTGAAAAGGGTGCAATTTTGCACCAAAACGTC
CAACACACTTCTCTCTGTTTTATACTTGCCCAAGCTACCGACACTGATGCCATGTCCAGGGCCACAAGTGATATTGGTGACGGTGACTTTCTCACAACTATGGCCAATAG
AGACACAATCATCACCGGTGCCAATGACGCCGTTAGAGATGCTGATCAATGTTGAGGTGCTAAGTTACGTTTGGAAGAGCCTGGCACTTGTTGTTGGTCTTGCAGTCATT
GTAGGGCCACGCGGCGGCGCCTTGGCCGTCAAAAACGCCGGAGCCGGTGAGTATGAAGCCGATTATGTCTTCGATGGAGATCCATTCAGTTGA
Protein sequenceShow/hide protein sequence
MLSKVILMADPVTRPAHVLILTPLVVLKRVQFCTKTSNTLLSVLYLPKLPTLMPCPGPQVILVTVTFSQLWPIETQSSPVPMTPLEMLINVEVLSYVWKSLALVVGLAVI
VGPRGGALAVKNAGAGEYEADYVFDGDPFS