; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh17G010450 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G010450
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr17:8839873..8840609
RNA-Seq ExpressionCmoCh17G010450
SyntenyCmoCh17G010450
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575810.1 hypothetical protein SDJN03_26449, partial [Cucurbita argyrosperma subsp. sororia]2.0e-9091.13Show/hide
Query:  MISMPFDREKLSLSSDSLSRWVTWGGGAFVFGCLLAISTFKMSKKIITPSKTGQDDDSNLNVDGFRESTRCVDEGTRQKDELQPFRQSSSTDLISHSCHT
        MISM FD+EKLSLSSDSLSRWVTWGGGAFVFGCLLAISTFKMSKKIITPSK GQDDDSNLNVDGFRES+RCV+EGTRQKDELQPFRQSSSTDLISHSCHT
Subjt:  MISMPFDREKLSLSSDSLSRWVTWGGGAFVFGCLLAISTFKMSKKIITPSKTGQDDDSNLNVDGFRESTRCVDEGTRQKDELQPFRQSSSTDLISHSCHT

Query:  TSQMLVKYSPLEDSVIDETQTLTTKSIPKKNDEENVVVNNYEEEEYTDSEKSVENEVAESFSSEEFDEATWL-GWTDKSSSYSLTSSSSLEEASSHGVFS
        TSQMLVKYSPLEDSV DETQTLTTKSIP+KNDEENVVVNNYEEEEYTDSEKSVENEV ESFSSEEFDEATWL GWTDKSSS S  SSSSLEE  S   FS
Subjt:  TSQMLVKYSPLEDSVIDETQTLTTKSIPKKNDEENVVVNNYEEEEYTDSEKSVENEVAESFSSEEFDEATWL-GWTDKSSSYSLTSSSSLEEASSHGVFS

Query:  GED
        GE+
Subjt:  GED

KAG7014352.1 hypothetical protein SDJN02_24529, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-9392.12Show/hide
Query:  MISMPFDREKLSLSSDSLSRWVTWGGGAFVFGCLLAISTFKMSKKIITPSKTGQDDDSNLNVDGFRESTRCVDEGTRQKDELQPFRQSSSTDLISHSCHT
        MISMPFD+EKLSLSSDSLSRWVTWGGGAFVFGCLLAISTFKM+KKIITPSK GQDDDSNLNVDGFRESTRCVDEGTRQKDELQPFRQSSST+LISHSCHT
Subjt:  MISMPFDREKLSLSSDSLSRWVTWGGGAFVFGCLLAISTFKMSKKIITPSKTGQDDDSNLNVDGFRESTRCVDEGTRQKDELQPFRQSSSTDLISHSCHT

Query:  TSQMLVKYSPLEDSVIDETQTLTTKSIPKKNDEENVVVNNYEEEEYTDSEKSVENEVAESFSSEEFDEATWL-GWTDKSSSYSLTSSSSLEEASSHGVFS
        TSQMLVKYS  +DSV DETQTLTTKSIP+KNDEENVVVNNYEEEEYTDSEKSVENEVAESFSSEEFDEATWL GWTDKSSSYSLTSSSSLEE  S   FS
Subjt:  TSQMLVKYSPLEDSVIDETQTLTTKSIPKKNDEENVVVNNYEEEEYTDSEKSVENEVAESFSSEEFDEATWL-GWTDKSSSYSLTSSSSLEEASSHGVFS

Query:  GED
        GE+
Subjt:  GED

XP_022953717.1 uncharacterized protein LOC111456164 [Cucurbita moschata]1.7e-105100Show/hide
Query:  MISMPFDREKLSLSSDSLSRWVTWGGGAFVFGCLLAISTFKMSKKIITPSKTGQDDDSNLNVDGFRESTRCVDEGTRQKDELQPFRQSSSTDLISHSCHT
        MISMPFDREKLSLSSDSLSRWVTWGGGAFVFGCLLAISTFKMSKKIITPSKTGQDDDSNLNVDGFRESTRCVDEGTRQKDELQPFRQSSSTDLISHSCHT
Subjt:  MISMPFDREKLSLSSDSLSRWVTWGGGAFVFGCLLAISTFKMSKKIITPSKTGQDDDSNLNVDGFRESTRCVDEGTRQKDELQPFRQSSSTDLISHSCHT

Query:  TSQMLVKYSPLEDSVIDETQTLTTKSIPKKNDEENVVVNNYEEEEYTDSEKSVENEVAESFSSEEFDEATWLGWTDKSSSYSLTSSSSLEEASSHGVFSG
        TSQMLVKYSPLEDSVIDETQTLTTKSIPKKNDEENVVVNNYEEEEYTDSEKSVENEVAESFSSEEFDEATWLGWTDKSSSYSLTSSSSLEEASSHGVFSG
Subjt:  TSQMLVKYSPLEDSVIDETQTLTTKSIPKKNDEENVVVNNYEEEEYTDSEKSVENEVAESFSSEEFDEATWLGWTDKSSSYSLTSSSSLEEASSHGVFSG

Query:  EDRKS
        EDRKS
Subjt:  EDRKS

XP_022991241.1 uncharacterized protein LOC111487956 [Cucurbita maxima]1.7e-8184.73Show/hide
Query:  MPFDREKLSLSSDSLSRWVTWGGGAFVFGCLLAISTFKMSKKIITPSKTGQDDDSNLNVDGFRESTRCVDEGTRQKDELQPFRQSSSTDLISHSCHTTSQ
        MPFDREKLSL SD LSRWVTWGGG FVF CLL +STFKMSKKIIT  KTG+DDDSNL+VD F ESTRCVDE TRQ+DE Q FRQSSSTDLISHSC+ TSQ
Subjt:  MPFDREKLSLSSDSLSRWVTWGGGAFVFGCLLAISTFKMSKKIITPSKTGQDDDSNLNVDGFRESTRCVDEGTRQKDELQPFRQSSSTDLISHSCHTTSQ

Query:  MLVKYSPLEDSVIDETQTLTTKSIPKKNDEENVVVNNYEEEEYTDSEKSVENEVAESFSSEEFDEATWL-GWTDKSSSYSLTSSSSLEEASSHGVFSGED
        MLVKYS LEDSVIDETQTLTTKSIP+KNDEEN+VVNNYEEEEYTDSEKSVEN VAESFSSEEFDEATWL GWTDKSSSYSLTSSSSLEEA S      +D
Subjt:  MLVKYSPLEDSVIDETQTLTTKSIPKKNDEENVVVNNYEEEEYTDSEKSVENEVAESFSSEEFDEATWL-GWTDKSSSYSLTSSSSLEEASSHGVFSGED

Query:  RKS
        RKS
Subjt:  RKS

XP_023548989.1 uncharacterized protein LOC111807479 [Cucurbita pepo subsp. pepo]3.0e-8687.38Show/hide
Query:  MISMPFDREKLSLSSDSLSRWVTWGGGAFVFGCLLAISTFKMSKKIITPSKTGQDDDSNLNVDGFRESTRCVDEGTRQKDELQPFRQSSSTDLISHSCHT
        MISMPFDREKLSLSSDSLSRWVTWGGGAFVFGCLLA+STFKM K IITP K G+DDDSNL+V GF ESTRCVDE TRQKDELQ FRQSSSTDLISHS H 
Subjt:  MISMPFDREKLSLSSDSLSRWVTWGGGAFVFGCLLAISTFKMSKKIITPSKTGQDDDSNLNVDGFRESTRCVDEGTRQKDELQPFRQSSSTDLISHSCHT

Query:  TSQMLVKYSPLEDSVIDETQTLTTKSIPKKNDEENVVVNNYEEEEYTDSEKSVENEVAESFSSEEFDEATWL-GWTDKSSSYSLTSSSSLEEASSHGVFS
        TSQ+LVKYSP EDSV DETQT+TTKS+ +KNDEENVVVNNY+EEEY DSEKSVENEVAES SSEEFDEATWL GWTDKSSSYSLTSSSSLEEA S GVFS
Subjt:  TSQMLVKYSPLEDSVIDETQTLTTKSIPKKNDEENVVVNNYEEEEYTDSEKSVENEVAESFSSEEFDEATWL-GWTDKSSSYSLTSSSSLEEASSHGVFS

Query:  GEDRKS
        GEDRKS
Subjt:  GEDRKS

TrEMBL top hitse value%identityAlignment
A0A0A0K656 Uncharacterized protein5.7e-2246.23Show/hide
Query:  SLSSDSLSRWVTWGGGAFVFGCLLAISTFKMSKKIITPSKTGQDDDSNLNV-DGFRESTRCVDEGTRQKDELQPFRQSSSTDLISHSCHTTSQMLVKYSP
        ++ +  + R V W GGAFVFGCLL  STFK SKK I+P KT ++  SNL+V  GF+ES+   D+   +K E      SSSTD+ISH CHT+S+M    + 
Subjt:  SLSSDSLSRWVTWGGGAFVFGCLLAISTFKMSKKIITPSKTGQDDDSNLNV-DGFRESTRCVDEGTRQKDELQPFRQSSSTDLISHSCHTTSQMLVKYSP

Query:  LEDSVIDETQTLTTKSIPKKNDEENVVVNNYEEEEYTDSEKSVE---------NEVAESF-SSEEFDEATWLGWTDKSSSYSLTSSSSLEEASSHGVFS
        +EDSV DE  TLTT+ I +K +E+N+V+  YEEEEYT+SE+S E         +EV +SF S+  FDE       DK+   S +SSSSL  +S   ++S
Subjt:  LEDSVIDETQTLTTKSIPKKNDEENVVVNNYEEEEYTDSEKSVE---------NEVAESF-SSEEFDEATWLGWTDKSSSYSLTSSSSLEEASSHGVFS

A0A1S3BRP4 uncharacterized protein LOC1034927951.4e-2041.1Show/hide
Query:  MISMPFDREKLS-------------------LSSDSLSRWVTWGGGAFVFGCLLAISTFKMSKKIITPSKTGQDDDSNLNVDGFRESTRCVDEGTRQKDE
        +ISMP D EK S                   + ++ + R V W GGAFVFGCLL  STFK SKKI T  K  ++ DS+L+V          D+  ++ + 
Subjt:  MISMPFDREKLS-------------------LSSDSLSRWVTWGGGAFVFGCLLAISTFKMSKKIITPSKTGQDDDSNLNVDGFRESTRCVDEGTRQKDE

Query:  LQPFRQSSSTDLISHSCHTTSQMLVKYSPLEDSVIDETQTLTTKSIPKKNDEENVVVNNYEEEEYTDSE-KSVEN---------EVAESFSS----EEFD
        L+    SSSTD+ISH CHT+S+ML   + +EDS  +     T   + KK+ EEN+VV  YEEEEYT+SE  S+EN          VA+SF S    +E+D
Subjt:  LQPFRQSSSTDLISHSCHTTSQMLVKYSPLEDSVIDETQTLTTKSIPKKNDEENVVVNNYEEEEYTDSE-KSVEN---------EVAESFSS----EEFD

Query:  EATWLGWTDKSSSYSLTSSSSL--EEASSHGVFSGE
        +      +  SSSYS +S SS   EE SS GV S E
Subjt:  EATWLGWTDKSSSYSLTSSSSL--EEASSHGVFSGE

A0A5A7VKM4 Uncharacterized protein8.8e-0739.32Show/hide
Query:  MISMPFDREKLS-------------------LSSDSLSRWVTWGGGAFVFGCLLAISTFKMSKKIITPSKTGQDDDSNLNVDGFRESTRCVDEGTRQKDE
        +ISMP D EK S                   + ++ + R V W GGAFVFGCLL  STFK SKKI T  K  ++ DS+L+V          D+  ++ + 
Subjt:  MISMPFDREKLS-------------------LSSDSLSRWVTWGGGAFVFGCLLAISTFKMSKKIITPSKTGQDDDSNLNVDGFRESTRCVDEGTRQKDE

Query:  LQPFRQSSSTDLISHSC
        L+    SSSTD+ISH C
Subjt:  LQPFRQSSSTDLISHSC

A0A6J1GP08 uncharacterized protein LOC1114561648.3e-106100Show/hide
Query:  MISMPFDREKLSLSSDSLSRWVTWGGGAFVFGCLLAISTFKMSKKIITPSKTGQDDDSNLNVDGFRESTRCVDEGTRQKDELQPFRQSSSTDLISHSCHT
        MISMPFDREKLSLSSDSLSRWVTWGGGAFVFGCLLAISTFKMSKKIITPSKTGQDDDSNLNVDGFRESTRCVDEGTRQKDELQPFRQSSSTDLISHSCHT
Subjt:  MISMPFDREKLSLSSDSLSRWVTWGGGAFVFGCLLAISTFKMSKKIITPSKTGQDDDSNLNVDGFRESTRCVDEGTRQKDELQPFRQSSSTDLISHSCHT

Query:  TSQMLVKYSPLEDSVIDETQTLTTKSIPKKNDEENVVVNNYEEEEYTDSEKSVENEVAESFSSEEFDEATWLGWTDKSSSYSLTSSSSLEEASSHGVFSG
        TSQMLVKYSPLEDSVIDETQTLTTKSIPKKNDEENVVVNNYEEEEYTDSEKSVENEVAESFSSEEFDEATWLGWTDKSSSYSLTSSSSLEEASSHGVFSG
Subjt:  TSQMLVKYSPLEDSVIDETQTLTTKSIPKKNDEENVVVNNYEEEEYTDSEKSVENEVAESFSSEEFDEATWLGWTDKSSSYSLTSSSSLEEASSHGVFSG

Query:  EDRKS
        EDRKS
Subjt:  EDRKS

A0A6J1JQ73 uncharacterized protein LOC1114879568.3e-8284.73Show/hide
Query:  MPFDREKLSLSSDSLSRWVTWGGGAFVFGCLLAISTFKMSKKIITPSKTGQDDDSNLNVDGFRESTRCVDEGTRQKDELQPFRQSSSTDLISHSCHTTSQ
        MPFDREKLSL SD LSRWVTWGGG FVF CLL +STFKMSKKIIT  KTG+DDDSNL+VD F ESTRCVDE TRQ+DE Q FRQSSSTDLISHSC+ TSQ
Subjt:  MPFDREKLSLSSDSLSRWVTWGGGAFVFGCLLAISTFKMSKKIITPSKTGQDDDSNLNVDGFRESTRCVDEGTRQKDELQPFRQSSSTDLISHSCHTTSQ

Query:  MLVKYSPLEDSVIDETQTLTTKSIPKKNDEENVVVNNYEEEEYTDSEKSVENEVAESFSSEEFDEATWL-GWTDKSSSYSLTSSSSLEEASSHGVFSGED
        MLVKYS LEDSVIDETQTLTTKSIP+KNDEEN+VVNNYEEEEYTDSEKSVEN VAESFSSEEFDEATWL GWTDKSSSYSLTSSSSLEEA S      +D
Subjt:  MLVKYSPLEDSVIDETQTLTTKSIPKKNDEENVVVNNYEEEEYTDSEKSVENEVAESFSSEEFDEATWL-GWTDKSSSYSLTSSSSLEEASSHGVFSGED

Query:  RKS
        RKS
Subjt:  RKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATCAATGCCGTTCGATCGGGAAAAATTAAGCTTGAGCTCGGACAGCCTATCCCGATGGGTCACGTGGGGTGGCGGAGCTTTCGTTTTTGGTTGTTTACTCGCAAT
TTCTACATTTAAGATGAGCAAGAAGATAATAACCCCTTCTAAAACGGGTCAAGACGACGATTCAAATCTCAATGTTGATGGTTTTAGAGAAAGTACTCGTTGCGTCGATG
AAGGAACTCGACAAAAGGATGAACTGCAACCGTTTCGTCAGTCTTCATCAACGGATCTCATCAGCCATTCATGCCACACAACGTCGCAAATGTTGGTAAAATATTCTCCA
CTGGAAGACTCTGTCATTGACGAAACTCAAACCCTAACGACGAAATCCATCCCAAAAAAAAATGACGAAGAAAATGTTGTGGTTAATAATTATGAAGAAGAAGAGTATAC
AGATTCAGAAAAATCCGTAGAAAATGAAGTTGCAGAGAGTTTTTCATCCGAAGAATTTGATGAAGCCACTTGGCTTGGGTGGACAGATAAATCATCATCATATTCATTAA
CATCGTCGTCATCATTAGAAGAAGCTTCATCTCATGGAGTTTTTTCTGGAGAAGATAGAAAGAGTTGA
mRNA sequenceShow/hide mRNA sequence
ACTGCCTTCCACGTCTCCCTCCTTCCCCAATCGATGATATCAATGCCGTTCGATCGGGAAAAATTAAGCTTGAGCTCGGACAGCCTATCCCGATGGGTCACGTGGGGTGG
CGGAGCTTTCGTTTTTGGTTGTTTACTCGCAATTTCTACATTTAAGATGAGCAAGAAGATAATAACCCCTTCTAAAACGGGTCAAGACGACGATTCAAATCTCAATGTTG
ATGGTTTTAGAGAAAGTACTCGTTGCGTCGATGAAGGAACTCGACAAAAGGATGAACTGCAACCGTTTCGTCAGTCTTCATCAACGGATCTCATCAGCCATTCATGCCAC
ACAACGTCGCAAATGTTGGTAAAATATTCTCCACTGGAAGACTCTGTCATTGACGAAACTCAAACCCTAACGACGAAATCCATCCCAAAAAAAAATGACGAAGAAAATGT
TGTGGTTAATAATTATGAAGAAGAAGAGTATACAGATTCAGAAAAATCCGTAGAAAATGAAGTTGCAGAGAGTTTTTCATCCGAAGAATTTGATGAAGCCACTTGGCTTG
GGTGGACAGATAAATCATCATCATATTCATTAACATCGTCGTCATCATTAGAAGAAGCTTCATCTCATGGAGTTTTTTCTGGAGAAGATAGAAAGAGTTGACGAGAAAA
Protein sequenceShow/hide protein sequence
MISMPFDREKLSLSSDSLSRWVTWGGGAFVFGCLLAISTFKMSKKIITPSKTGQDDDSNLNVDGFRESTRCVDEGTRQKDELQPFRQSSSTDLISHSCHTTSQMLVKYSP
LEDSVIDETQTLTTKSIPKKNDEENVVVNNYEEEEYTDSEKSVENEVAESFSSEEFDEATWLGWTDKSSSYSLTSSSSLEEASSHGVFSGEDRKS