; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh17G010600 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G010600
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description60S ribosomal protein L22-2-like
Genome locationCmo_Chr17:8876269..8877649
RNA-Seq ExpressionCmoCh17G010600
SyntenyCmoCh17G010600
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002671 - Ribosomal protein L22e
IPR038526 - Ribosomal protein L22e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136027.1 60S ribosomal protein L22-2 [Cucumis sativus]3.0e-6098.41Show/hide
Query:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASG PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

XP_022953729.1 60S ribosomal protein L22-2-like [Cucurbita moschata]5.4e-62100Show/hide
Query:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

XP_022960081.1 60S ribosomal protein L22-2-like [Cucurbita moschata]1.5e-5997.62Show/hide
Query:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASG PKGKKKG TFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

XP_022991268.1 60S ribosomal protein L22-2-like [Cucurbita maxima]3.0e-6098.41Show/hide
Query:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASG PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYEL+YFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

XP_023548993.1 60S ribosomal protein L22-2-like [Cucurbita pepo subsp. pepo]1.3e-6099.21Show/hide
Query:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASG PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

TrEMBL top hitse value%identityAlignment
A0A0A0K637 Uncharacterized protein1.4e-6098.41Show/hide
Query:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASG PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

A0A5D3D2W6 60S ribosomal protein L22-2-like1.4e-6098.41Show/hide
Query:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASG PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

A0A6J1DLK6 60S ribosomal protein L22-21.4e-6098.41Show/hide
Query:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASG PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

A0A6J1GQI3 60S ribosomal protein L22-2-like2.6e-62100Show/hide
Query:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

A0A6J1JVR1 60S ribosomal protein L22-2-like1.4e-6098.41Show/hide
Query:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASG PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYEL+YFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

SwissProt top hitse value%identityAlignment
P35268 60S ribosomal protein L221.4e-3163.79Show/hide
Query:  KGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGAL-GDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVY
        K KK+ + F +DC  PVED IMD A+ E+FL ERIKV GKAG L G  VT+ R K+KITV S+  FSKRYLKYLTKKYLKK+N+RDWLRV+A++K+   Y
Subjt:  KGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGAL-GDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVY

Query:  ELRYFNIAENEGEEED
        ELRYF I ++E EEED
Subjt:  ELRYFNIAENEGEEED

P47198 60S ribosomal protein L228.0e-3263.79Show/hide
Query:  KGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGAL-GDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVY
        K KK+ + F +DC  PVED IMD A+ E+FL ERIKV GKAG L G  VT+ R K+KITV S+  FSKRYLKYLTKKYLKK+N+RDWLRV+A++K+   Y
Subjt:  KGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGAL-GDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVY

Query:  ELRYFNIAENEGEEED
        ELRYF I ++E EEED
Subjt:  ELRYFNIAENEGEEED

Q9FE58 60S ribosomal protein L22-31.5e-5181.75Show/hide
Query:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AA+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V++TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IA+NKDRN+YELRYFNIAENE EEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

Q9M9W1 60S ribosomal protein L22-21.4e-5283.33Show/hide
Query:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGD+VT+TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IA+NKDRN+YELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

Q9SRX7 Putative 60S ribosomal protein L22-12.1e-4067.46Show/hide
Query:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        M+R  A S     KKKGV+FVIDC+KPV+D I++IA+LEKFL ERIKV GKAGALG++V++TR   KI VN++SNFSKRYLKYLTKKYLKK+N+RDWLRV
Subjt:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKD+NVYE+RYF I +     E+
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

Arabidopsis top hitse value%identityAlignment
AT1G02830.1 Ribosomal L22e protein family1.5e-4167.46Show/hide
Query:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        M+R  A S     KKKGV+FVIDC+KPV+D I++IA+LEKFL ERIKV GKAGALG++V++TR   KI VN++SNFSKRYLKYLTKKYLKK+N+RDWLRV
Subjt:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKD+NVYE+RYF I +     E+
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

AT3G05560.1 Ribosomal L22e protein family9.9e-5483.33Show/hide
Query:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGD+VT+TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IA+NKDRN+YELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

AT3G05560.2 Ribosomal L22e protein family9.9e-5483.33Show/hide
Query:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGD+VT+TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IA+NKDRN+YELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

AT3G05560.3 Ribosomal L22e protein family9.9e-5483.33Show/hide
Query:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGD+VT+TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IA+NKDRN+YELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

AT5G27770.1 Ribosomal L22e protein family1.1e-5281.75Show/hide
Query:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AA+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V++TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IA+NKDRN+YELRYFNIAENE EEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCGTGGAGCAGCCGCATCCGGTTGCCCGAAGGGGAAGAAGAAGGGCGTGACCTTCGTTATCGATTGTGCGAAGCCAGTCGAGGACAAGATTATGGACATCGCCTC
ATTGGAGAAGTTTCTTCTCGAGAGGATCAAGGTCGGCGGCAAAGCTGGGGCACTTGGTGACGCTGTCACCGTCACACGGGACAAAAACAAGATCACCGTCAACTCCGATA
GCAACTTCTCTAAGAGGTATCTTAAGTACTTGACTAAGAAGTATTTGAAGAAGCACAACGTCAGAGATTGGCTTCGGGTTATTGCTTCGAACAAGGACCGCAACGTCTAT
GAATTGAGGTACTTCAACATTGCCGAGAACGAGGGCGAGGAAGAAGACTGA
mRNA sequenceShow/hide mRNA sequence
TTTTAAGCTACTCAAAACCCTAAATTGAGCGCCGTTTGTTCTATACGTCTTGAGGAAGTTAGGGCGCCAAGCTGCACAGAGCAGAAGCAAAAATGAGCCGTGGAGCAGCC
GCATCCGGTTGCCCGAAGGGGAAGAAGAAGGGCGTGACCTTCGTTATCGATTGTGCGAAGCCAGTCGAGGACAAGATTATGGACATCGCCTCATTGGAGAAGTTTCTTCT
CGAGAGGATCAAGGTCGGCGGCAAAGCTGGGGCACTTGGTGACGCTGTCACCGTCACACGGGACAAAAACAAGATCACCGTCAACTCCGATAGCAACTTCTCTAAGAGGT
ATCTTAAGTACTTGACTAAGAAGTATTTGAAGAAGCACAACGTCAGAGATTGGCTTCGGGTTATTGCTTCGAACAAGGACCGCAACGTCTATGAATTGAGGTACTTCAAC
ATTGCCGAGAACGAGGGCGAGGAAGAAGACTGAGGCTCAAGTCTTACAAATTGACTAGTTGTAGCGGCCTTTCTCATTTTGAAGGTTGTTGAAATTATATTTCCATACCT
CGCCTTGAATTGAGTTATATTAGAGATAATGCAACTCTTGTTTAATTCTGAAGTCTCAATATCTATAAATTTTGATCGCGTAGTTCCCTTC
Protein sequenceShow/hide protein sequence
MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVY
ELRYFNIAENEGEEED