CuGenDBv2

Gene ID	CmoCh17G010610
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	outer envelope pore protein 16-4, chloroplastic
Genome location	Cmo_Chr17:8877804..8878165
RNA-Seq Expression	CmoCh17G010610
Synteny	CmoCh17G010610
Gene Ontology terms	GO:0045039 - protein insertion into mitochondrial inner membrane (biological process) GO:0042721 - TIM22 mitochondrial import inner membrane insertion complex (cellular component)
InterPro domains	IPR039175 - Mitochondrial import inner membrane translocase subunit TIM22

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6575824.1 hypothetical protein SDJN03_26463, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-24

96.72

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Query:  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLCM
        ME ELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLC+
Subjt:  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLCM

XP_022143743.1 outer envelope pore protein 16-4, chloroplastic isoform X1 [Momordica charantia]

8.7e-12

61.11

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Query:  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLCMGPYNSRKNGLR
        MEDELNGVVPCSSLAVESTIRVGT                            AGALWGLCMGPYNSRKNGLR
Subjt:  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLCMGPYNSRKNGLR

XP_022143748.1 outer envelope pore protein 16-4, chloroplastic isoform X2 [Momordica charantia]

8.7e-12

61.11

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Query:  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLCMGPYNSRKNGLR
        MEDELNGVVPCSSLAVESTIRVGT                            AGALWGLCMGPYNSRKNGLR
Subjt:  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLCMGPYNSRKNGLR

XP_023548994.1 outer envelope pore protein 16-4, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]

3.3e-11

60.56

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Query:  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLCMGPYNSRKNGL
        MEDELNGVVPCSSLAVESTIRVGT                            AGALWGLCMGPYNSRKNGL
Subjt:  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLCMGPYNSRKNGL

XP_023548995.1 outer envelope pore protein 16-4, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo]

3.3e-11

60.56

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Query:  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLCMGPYNSRKNGL
        MEDELNGVVPCSSLAVESTIRVGT                            AGALWGLCMGPYNSRKNGL
Subjt:  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLCMGPYNSRKNGL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7VIR9 Outer envelope pore protein 16-4

1.0e-10

57.75

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Query:  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLCMGPYNSRKNGL
        MEDELNGVVPCSSLAVES+IRVGT                            AGALWGLC+GPYNSRKNGL
Subjt:  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLCMGPYNSRKNGL

A0A6J1CRG7 outer envelope pore protein 16-4, chloroplastic isoform X1

4.2e-12

61.11

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Query:  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLCMGPYNSRKNGLR
        MEDELNGVVPCSSLAVESTIRVGT                            AGALWGLCMGPYNSRKNGLR
Subjt:  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLCMGPYNSRKNGLR

A0A6J1CRH2 outer envelope pore protein 16-4, chloroplastic isoform X2

4.2e-12

61.11

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Query:  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLCMGPYNSRKNGLR
        MEDELNGVVPCSSLAVESTIRVGT                            AGALWGLCMGPYNSRKNGLR
Subjt:  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLCMGPYNSRKNGLR

A0A6J1H7T5 outer envelope pore protein 16-4, chloroplastic

1.6e-11

60.56

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Query:  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLCMGPYNSRKNGL
        MEDELNGVVPCSSLAVESTIRVGT                            AGALWGLCMGPYNSRKNGL
Subjt:  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLCMGPYNSRKNGL

A0A6J1KSU1 outer envelope pore protein 16-4, chloroplastic

1.6e-11

60.56

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Query:  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLCMGPYNSRKNGL
        MEDELNGVVPCSSLAVESTIRVGT                            AGALWGLCMGPYNSRKNGL
Subjt:  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLCMGPYNSRKNGL

SwissProt top hits

e value

%identity

Alignment

Q9LZH8 Outer envelope pore protein 16-4, chloroplastic

3.1e-04

39.44

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Query:  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLCMGPYNSRKNGL
        ME+EL   VPCSSL VES +RV T                            AG L+GLC GP ++RK GL
Subjt:  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLCMGPYNSRKNGL

Arabidopsis top hits

e value

%identity

Alignment

AT3G62880.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein

2.2e-05

39.44

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Query:  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLCMGPYNSRKNGL
        ME+EL   VPCSSL VES +RV T                            AG L+GLC GP ++RK GL
Subjt:  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLCMGPYNSRKNGL

AT3G62880.2 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein

2.2e-05

39.44

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Query:  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLCMGPYNSRKNGL
        ME+EL   VPCSSL VES +RV T                            AG L+GLC GP ++RK GL
Subjt:  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLCMGPYNSRKNGL

Sequences

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CDS sequence

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ATGGAAGACGAGCTCAACGGCGTCGTTCCATGTTCTTCCCTCGCCGTCGAATCCACCATTCGCGTCGGAACAGTGAACTTCACGAACAATTTCTTGAACTATGATTCGTT
TTCTACAACTTCTCCATCTGAATCGCTTTTCCCTGCTCGTGTTCAGGCCGGCGCTCTATGGGGCTTGTGTATGGGTCCGTACAATTCTCGTAAAAATGGCCTCAGATGGT
AG

mRNA sequence

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AAATTTTGCTGCGTACGACTCCCGAAGGAACTTGAGAACTGAAAGATGGAAGACGAGCTCAACGGCGTCGTTCCATGTTCTTCCCTCGCCGTCGAATCCACCATTCGCGT
CGGAACAGTGAACTTCACGAACAATTTCTTGAACTATGATTCGTTTTCTACAACTTCTCCATCTGAATCGCTTTTCCCTGCTCGTGTTCAGGCCGGCGCTCTATGGGGCT
TGTGTATGGGTCCGTACAATTCTCGTAAAAATGGCCTCAGATGGTAG

Protein sequence

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MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSTTSPSESLFPARVQAGALWGLCMGPYNSRKNGLRW

CmoCh17G010610 (gene) of Cucurbita moschata (Rifu) v1 genome