; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh17G010760 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G010760
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiontranslocator protein homolog
Genome locationCmo_Chr17:8944187..8944753
RNA-Seq ExpressionCmoCh17G010760
SyntenyCmoCh17G010760
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004307 - TspO/MBR-related protein
IPR038330 - TspO/MBR-related superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575839.1 Translocator protein-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.4e-9396.86Show/hide
Query:  MASTELKHRTTGDSPAVP---AAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS
        MASTELKHRTTGDSP VP   AAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS
Subjt:  MASTELKHRTTGDSPAVP---AAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS

Query:  WLFWAEGGFQARPNALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTIVSLTMVSV
        WLFWAEGGFQARPNALYLYTLYLVLCMAW+GLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTIVSLTMV+V
Subjt:  WLFWAEGGFQARPNALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTIVSLTMVSV

KAG7014374.1 Translocator protein-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-8594.48Show/hide
Query:  MASTELKHRTTGDSPAVP---AAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS
        MASTELKHRTTGDSP VP   AAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS
Subjt:  MASTELKHRTTGDSPAVP---AAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISS

Query:  WLFWAEGGFQARPNALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFL
        WLFWAEGGFQARPNALYLYTLYLVLCMAW+GLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPC     FL
Subjt:  WLFWAEGGFQARPNALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFL

XP_022953735.1 translocator protein homolog [Cucurbita moschata]1.0e-96100Show/hide
Query:  MASTELKHRTTGDSPAVPAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLF
        MASTELKHRTTGDSPAVPAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLF
Subjt:  MASTELKHRTTGDSPAVPAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLF

Query:  WAEGGFQARPNALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTIVSLTMVSV
        WAEGGFQARPNALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTIVSLTMVSV
Subjt:  WAEGGFQARPNALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTIVSLTMVSV

XP_022992488.1 translocator protein homolog [Cucurbita maxima]2.3e-9396.28Show/hide
Query:  MASTELKHRTTGDSPAVPAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLF
        MASTELKHRTTGDSPAVPAAADEVS KR KNKAIAKRGLKSLAVAVSIPIAVTLLSILLL++PKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLF
Subjt:  MASTELKHRTTGDSPAVPAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLF

Query:  WAEGGFQARPNALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTIVSLTMVSV
        WAEGGFQA+PNALYLYTLYLVLCMAW+GLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVN IAADLVRPCLVWSVFLTIVSLTMVSV
Subjt:  WAEGGFQARPNALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTIVSLTMVSV

XP_023548365.1 translocator protein homolog [Cucurbita pepo subsp. pepo]4.9e-9195.21Show/hide
Query:  MASTELKHRTTGDSPAVPAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLF
        MASTELKHRTTGDSPA P AADE SAKR KNKAIAKRGLKSLAVAVSIPIAVTLLSILLL+RPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLF
Subjt:  MASTELKHRTTGDSPAVPAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLF

Query:  WAEGGFQARPNALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTIVSLTMVSV
        WAEGGFQA+PNA+YLYTLYLVLCMAW+GLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVN IAADLVRPCLVWSVFLTIVSLTMVSV
Subjt:  WAEGGFQARPNALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTIVSLTMVSV

TrEMBL top hitse value%identityAlignment
A0A0A0KAU9 Uncharacterized protein2.5e-6468.06Show/hide
Query:  MASTELKHRTTGDS--PAVPAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYP-SATKPFWVPSARVVNWGSLASSLLMGISS
        MAST+LKHR T DS   +  +A D    K+ KNK IAKRGL+SLA+A+SIP+++TL  ILL +  KNYYP SA KPFWVPSA+VVNWGSL SSLLMG+++
Subjt:  MASTELKHRTTGDS--PAVPAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYP-SATKPFWVPSARVVNWGSLASSLLMGISS

Query:  WLFWAEGGFQARPNALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTIVSLTMVSV
        WL WAEGGF ARPNALYLY LY VLC+ W+ L+ GAG+R L ++ACLGKTA LVGCDRLFRGVN +AADLV+PCLVWSV LT+V+LT+VS+
Subjt:  WLFWAEGGFQARPNALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTIVSLTMVSV

A0A5A7VJL5 Translocator protein-like protein2.7e-6367.54Show/hide
Query:  MASTELKHRTTGDSPAVPAAADEVS--AKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYP-SATKPFWVPSARVVNWGSLASSLLMGISS
        MAST+LKHR T DS        +V+   K+ +NK IAKRGL+SLA+A+SIP+++TLL I L +  KNYYP SA +PFWVPS +VVNWGSL SSLLMG+++
Subjt:  MASTELKHRTTGDSPAVPAAADEVS--AKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYP-SATKPFWVPSARVVNWGSLASSLLMGISS

Query:  WLFWAEGGFQARPNALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTIVSLTMVSV
        WL WAEGGF +RPNALYLY LYLVL +AW+ LV GAG+R L S+ACLGKTA LVGCDRLFRGVN IAADLV+PCLVWSV LT+V+LTM S+
Subjt:  WLFWAEGGFQARPNALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTIVSLTMVSV

A0A6J1DBR2 translocator protein homolog1.1e-5361.5Show/hide
Query:  MASTELKHRTTGDSPAVPAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLF
        MAS +LKHR   +S     A    +A   K  A A+RGLKSLAVAVS+P++++LL++ LL+ P  + PS+ KPFW PSA  VN GS ASSLLMG + WL 
Subjt:  MASTELKHRTTGDSPAVPAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLF

Query:  WAEGGFQARPNALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTIVSLTMVS
        WA+GGF + PNALYLYTLY++LC  W+GL+LGAG+  L +VACL KTA LVGCDRLFR VN IAADLV+PCL WSVFLT+V+LTMV+
Subjt:  WAEGGFQARPNALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTIVSLTMVS

A0A6J1GQH6 translocator protein homolog4.9e-97100Show/hide
Query:  MASTELKHRTTGDSPAVPAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLF
        MASTELKHRTTGDSPAVPAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLF
Subjt:  MASTELKHRTTGDSPAVPAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLF

Query:  WAEGGFQARPNALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTIVSLTMVSV
        WAEGGFQARPNALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTIVSLTMVSV
Subjt:  WAEGGFQARPNALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTIVSLTMVSV

A0A6J1JZC9 translocator protein homolog1.1e-9396.28Show/hide
Query:  MASTELKHRTTGDSPAVPAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLF
        MASTELKHRTTGDSPAVPAAADEVS KR KNKAIAKRGLKSLAVAVSIPIAVTLLSILLL++PKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLF
Subjt:  MASTELKHRTTGDSPAVPAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLF

Query:  WAEGGFQARPNALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTIVSLTMVSV
        WAEGGFQA+PNALYLYTLYLVLCMAW+GLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVN IAADLVRPCLVWSVFLTIVSLTMVSV
Subjt:  WAEGGFQARPNALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTIVSLTMVSV

SwissProt top hitse value%identityAlignment
O82245 Translocator protein homolog1.7e-3037.82Show/hide
Query:  MASTELKHRTTGDSPAVPAA--------ADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLL
        M S ++++R   D  A   A        AD+   KR++ +A+AKRGLKSL VAV+ P+ VTL +   L     Y   A    W+P   +++   LASS L
Subjt:  MASTELKHRTTGDSPAVPAA--------ADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLL

Query:  MGISSWLFWAEGGFQARPNALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTIVSLTM
        MG+++WL W +GGF  +PNALYLY    +LC+ W  +    GS   G    LG++A L GC + F  ++ +A +LV+PCL W+ F+  V++ +
Subjt:  MGISSWLFWAEGGFQARPNALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTIVSLTM

Arabidopsis top hitse value%identityAlignment
AT2G47770.1 TSPO(outer membrane tryptophan-rich sensory protein)-related1.2e-3137.82Show/hide
Query:  MASTELKHRTTGDSPAVPAA--------ADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLL
        M S ++++R   D  A   A        AD+   KR++ +A+AKRGLKSL VAV+ P+ VTL +   L     Y   A    W+P   +++   LASS L
Subjt:  MASTELKHRTTGDSPAVPAA--------ADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLL

Query:  MGISSWLFWAEGGFQARPNALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTIVSLTM
        MG+++WL W +GGF  +PNALYLY    +LC+ W  +    GS   G    LG++A L GC + F  ++ +A +LV+PCL W+ F+  V++ +
Subjt:  MGISSWLFWAEGGFQARPNALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTIVSLTM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCACCGAGCTTAAGCACCGAACAACAGGCGACTCCCCCGCCGTCCCAGCCGCCGCCGACGAGGTTAGCGCGAAGAGAGAGAAGAACAAGGCTATCGCCAAACG
AGGCCTGAAGTCTCTAGCTGTGGCAGTCTCCATCCCCATCGCCGTCACTCTCCTCTCCATCCTCCTCCTTGCCAGACCCAAAAACTACTACCCCTCCGCCACGAAGCCCT
TCTGGGTTCCATCGGCAAGGGTCGTGAACTGGGGGTCGTTGGCTTCTAGCTTGTTGATGGGCATCTCGAGCTGGCTGTTCTGGGCTGAAGGCGGGTTCCAAGCTAGGCCC
AACGCGCTGTATCTTTACACTTTGTACTTGGTGCTGTGCATGGCGTGGCACGGCCTCGTGCTTGGAGCCGGGTCGCGATGGCTAGGCTCCGTGGCGTGTTTGGGGAAGAC
GGCGACGCTGGTTGGGTGTGACCGGTTGTTCCGAGGAGTGAACGCGATTGCGGCGGACTTGGTTAGGCCTTGTTTGGTTTGGTCTGTTTTTCTTACTATCGTGAGTCTTA
CAATGGTTTCTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCACCGAGCTTAAGCACCGAACAACAGGCGACTCCCCCGCCGTCCCAGCCGCCGCCGACGAGGTTAGCGCGAAGAGAGAGAAGAACAAGGCTATCGCCAAACG
AGGCCTGAAGTCTCTAGCTGTGGCAGTCTCCATCCCCATCGCCGTCACTCTCCTCTCCATCCTCCTCCTTGCCAGACCCAAAAACTACTACCCCTCCGCCACGAAGCCCT
TCTGGGTTCCATCGGCAAGGGTCGTGAACTGGGGGTCGTTGGCTTCTAGCTTGTTGATGGGCATCTCGAGCTGGCTGTTCTGGGCTGAAGGCGGGTTCCAAGCTAGGCCC
AACGCGCTGTATCTTTACACTTTGTACTTGGTGCTGTGCATGGCGTGGCACGGCCTCGTGCTTGGAGCCGGGTCGCGATGGCTAGGCTCCGTGGCGTGTTTGGGGAAGAC
GGCGACGCTGGTTGGGTGTGACCGGTTGTTCCGAGGAGTGAACGCGATTGCGGCGGACTTGGTTAGGCCTTGTTTGGTTTGGTCTGTTTTTCTTACTATCGTGAGTCTTA
CAATGGTTTCTGTTTGA
Protein sequenceShow/hide protein sequence
MASTELKHRTTGDSPAVPAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSILLLARPKNYYPSATKPFWVPSARVVNWGSLASSLLMGISSWLFWAEGGFQARP
NALYLYTLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVFLTIVSLTMVSV