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CmoCh17G010780 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G010780
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionheat shock factor-binding protein 1
Genome locationCmo_Chr17:8950065..8953365
RNA-Seq ExpressionCmoCh17G010780
SyntenyCmoCh17G010780
Gene Ontology termsGO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0070370 - cellular heat acclimation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0003714 - transcription corepressor activity (molecular function)
InterPro domainsIPR009643 - Heat shock factor binding 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575841.1 Heat shock factor-binding protein, partial [Cucurbita argyrosperma subsp. sororia]2.1e-4986.67Show/hide
Query:  MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDEARARSRTQLGPFVV
        MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDE    + T       
Subjt:  MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDEARARSRTQLGPFVV

Query:  VADTAVEKTVRNAAMKQNGRRKESLAAILALSAIP
             VEKTVRNAAMKQNGRRKESLAAILALSAIP
Subjt:  VADTAVEKTVRNAAMKQNGRRKESLAAILALSAIP

XP_022953166.1 heat shock factor-binding protein 1-like isoform X1 [Cucurbita moschata]1.2e-36100Show/hide
Query:  MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDE
        MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDE
Subjt:  MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDE

XP_022953167.1 heat shock factor-binding protein 1-like isoform X2 [Cucurbita moschata]5.3e-3797.75Show/hide
Query:  MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDEARA
        MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDE  A
Subjt:  MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDEARA

XP_022991818.1 heat shock factor-binding protein 1-like isoform X1 [Cucurbita maxima]1.0e-3598.84Show/hide
Query:  MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDE
        MDGHDSED KQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDE
Subjt:  MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDE

XP_022991819.1 heat shock factor-binding protein 1-like isoform X2 [Cucurbita maxima]4.5e-3696.63Show/hide
Query:  MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDEARA
        MDGHDSED KQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDE  A
Subjt:  MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDEARA

TrEMBL top hitse value%identityAlignment
A0A1S3BSN9 heat shock factor-binding protein 13.5e-3491.01Show/hide
Query:  MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDEARA
        MDGHDSED KQSTADMT+FVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLK+EMGVEGSPSP+ PSKS ADEVKKDE  A
Subjt:  MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDEARA

A0A6J1GM89 heat shock factor-binding protein 1-like isoform X15.8e-37100Show/hide
Query:  MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDE
        MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDE
Subjt:  MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDE

A0A6J1GMG8 heat shock factor-binding protein 1-like isoform X22.6e-3797.75Show/hide
Query:  MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDEARA
        MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDE  A
Subjt:  MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDEARA

A0A6J1JVW1 heat shock factor-binding protein 1-like isoform X22.2e-3696.63Show/hide
Query:  MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDEARA
        MDGHDSED KQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDE  A
Subjt:  MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDEARA

A0A6J1JXC9 heat shock factor-binding protein 1-like isoform X14.9e-3698.84Show/hide
Query:  MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDE
        MDGHDSED KQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDE
Subjt:  MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDE

SwissProt top hitse value%identityAlignment
O75506 Heat shock factor-binding protein 17.6e-1059.32Show/hide
Query:  DPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVE
        DPK +  D+T  VQ LLQQMQ +FQTMSD II +ID+M SRI++LE++I DL ++ GVE
Subjt:  DPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVE

Q3ZC22 Heat shock factor-binding protein 17.6e-1059.32Show/hide
Query:  DPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVE
        DPK +  D+T  VQ LLQQMQ +FQTMSD II +ID+M SRI++LE++I DL ++ GVE
Subjt:  DPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVE

Q5RDI2 Heat shock factor-binding protein 17.6e-1059.32Show/hide
Query:  DPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVE
        DPK +  D+T  VQ LLQQMQ +FQTMSD II +ID+M SRI++LE++I DL ++ GVE
Subjt:  DPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVE

Q8GW48 Heat shock factor-binding protein1.4e-2779.52Show/hide
Query:  MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVK
        MDGHDSED KQSTADMT FVQNLLQQMQ+RFQTMSDSIITKID+MG RINELEQSINDL++EMGVEG+P    P+  S DE K
Subjt:  MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVK

Q9CQZ1 Heat shock factor-binding protein 16.4e-0955.93Show/hide
Query:  DPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVE
        DPK +  D+T+ V+ LLQQMQ +FQ MSD II +ID+M SRI++LE++I DL ++ GVE
Subjt:  DPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVE

Arabidopsis top hitse value%identityAlignment
AT4G15802.1 heat shock factor binding protein9.7e-2979.52Show/hide
Query:  MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVK
        MDGHDSED KQSTADMT FVQNLLQQMQ+RFQTMSDSIITKID+MG RINELEQSINDL++EMGVEG+P    P+  S DE K
Subjt:  MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGGCATGACTCTGAAGATCCGAAGCAAAGCACGGCTGATATGACGGTTTTTGTGCAAAATCTTCTTCAACAGATGCAATCTAGGTTCCAAACCATGTCTGACTC
CATTATCACAAAGATCGATGAGATGGGGAGCCGCATAAATGAATTGGAGCAGAGCATCAACGATCTAAAATCTGAGATGGGTGTTGAGGGCTCACCGTCGCCGATGACTC
CTTCAAAGTCGAGTGCAGATGAAGTGAAGAAAGATGAAGCTAGAGCTCGATCGAGGACCCAACTCGGGCCTTTTGTGGTGGTGGCCGATACTGCAGTGGAGAAGACGGTC
AGGAATGCAGCGATGAAGCAAAATGGAAGGAGAAAAGAAAGCTTGGCCGCCATTCTTGCTTTATCTGCTATTCCTGCAAAGACTTCCTATGGGTGGAGTAGAGAATAA
mRNA sequenceShow/hide mRNA sequence
TGTAGAAAGTGGGGGCGAAATGAGCATCACTTAAGCAAGCAAGACGGCCATTCGCCACATTCGTCTTTCGCATTCTTCACCCGCTAACCGGACGATTGGGCATCGCGAGT
TTTAGCATTATCTCCCGATTGTCTCTTGAAGATCCAGTTTTGCAGTTATGGATGGGCATGACTCTGAAGATCCGAAGCAAAGCACGGCTGATATGACGGTTTTTGTGCAA
AATCTTCTTCAACAGATGCAATCTAGGTTCCAAACCATGTCTGACTCCATTATCACAAAGATCGATGAGATGGGGAGCCGCATAAATGAATTGGAGCAGAGCATCAACGA
TCTAAAATCTGAGATGGGTGTTGAGGGCTCACCGTCGCCGATGACTCCTTCAAAGTCGAGTGCAGATGAAGTGAAGAAAGATGAAGCTAGAGCTCGATCGAGGACCCAAC
TCGGGCCTTTTGTGGTGGTGGCCGATACTGCAGTGGAGAAGACGGTCAGGAATGCAGCGATGAAGCAAAATGGAAGGAGAAAAGAAAGCTTGGCCGCCATTCTTGCTTTA
TCTGCTATTCCTGCAAAGACTTCCTATGGGTGGAGTAGAGAATAA
Protein sequenceShow/hide protein sequence
MDGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDEARARSRTQLGPFVVVADTAVEKTV
RNAAMKQNGRRKESLAAILALSAIPAKTSYGWSRE