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CmoCh17G010810 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G010810
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr17:8957466..8957860
RNA-Seq ExpressionCmoCh17G010810
SyntenyCmoCh17G010810
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA9893508.1 unnamed protein product [Spirodela intermedia]3.2e-0680.56Show/hide
Query:  SLFRVQYSGVLGVEEPHHQSIPNLVVKFYCGDSVLG
        SLF V+YSGVLGVEEP HQSIPNLVVK YCGD  +G
Subjt:  SLFRVQYSGVLGVEEPHHQSIPNLVVKFYCGDSVLG

KAB2037673.1 hypothetical protein ES319_D03G092800v1 [Gossypium barbadense]4.2e-0666.67Show/hide
Query:  MLFSHAFLSLFRVQYSGVLGVEEPHHQSIPNLVVKFYCGDSVLG-VKELHQSIP
        MLF  A LSLF V+YSGVLGVEE  HQSIPNLVVK YCGD  +G V + + S P
Subjt:  MLFSHAFLSLFRVQYSGVLGVEEPHHQSIPNLVVKFYCGDSVLG-VKELHQSIP

KAG4920634.1 hypothetical protein JHK86_049447 [Glycine max]8.5e-0772.73Show/hide
Query:  MLFSHAFLSLFRVQYSGVLGVEEPHHQSIPNLVVKFYCGDSVLG
        +L SHAFL  F VQYS VLG+EEP HQSIPNLVVK YCG  +LG
Subjt:  MLFSHAFLSLFRVQYSGVLGVEEPHHQSIPNLVVKFYCGDSVLG

KAG8497038.1 hypothetical protein CXB51_008255 [Gossypium anomalum]4.2e-0672.09Show/hide
Query:  LFSHAFLSLFRVQYSGVLGVEEPHHQSIPNLVVKFYCGDSVLG
        LF  A LS F V+YSGVLGVEE  HQSIPNLVVK YCGD  +G
Subjt:  LFSHAFLSLFRVQYSGVLGVEEPHHQSIPNLVVKFYCGDSVLG

RYR42384.1 hypothetical protein Ahy_A08g038856 [Arachis hypogaea]5.5e-0678.38Show/hide
Query:  LSLFRVQYSGVLGVEEPHHQSIPNLVVKFYCGDSVLG
        LS F V+YSGVLGVEEP HQSIPNLVVK YCGD  +G
Subjt:  LSLFRVQYSGVLGVEEPHHQSIPNLVVKFYCGDSVLG

TrEMBL top hitse value%identityAlignment
A0A5D2D567 Uncharacterized protein2.1e-0666.67Show/hide
Query:  MLFSHAFLSLFRVQYSGVLGVEEPHHQSIPNLVVKFYCGDSVLG-VKELHQSIP
        MLF  A LSLF V+YSGVLGVEE  HQSIPNLVVK YCGD  +G V + + S P
Subjt:  MLFSHAFLSLFRVQYSGVLGVEEPHHQSIPNLVVKFYCGDSVLG-VKELHQSIP

A0A5J5S263 Uncharacterized protein2.1e-0666.67Show/hide
Query:  MLFSHAFLSLFRVQYSGVLGVEEPHHQSIPNLVVKFYCGDSVLG-VKELHQSIP
        MLF  A LSLF V+YSGVLGVEE  HQSIPNLVVK YCGD  +G V + + S P
Subjt:  MLFSHAFLSLFRVQYSGVLGVEEPHHQSIPNLVVKFYCGDSVLG-VKELHQSIP

A0A5N6MKY7 Uncharacterized protein2.7e-0678.38Show/hide
Query:  LSLFRVQYSGVLGVEEPHHQSIPNLVVKFYCGDSVLG
        LS F V+YSGVLGVEEP HQSIPNLVVK YCGD  +G
Subjt:  LSLFRVQYSGVLGVEEPHHQSIPNLVVKFYCGDSVLG

A0A5N6Q8H4 Uncharacterized protein2.7e-0678.38Show/hide
Query:  LSLFRVQYSGVLGVEEPHHQSIPNLVVKFYCGDSVLG
        LS F V+YSGVLGVEEP HQSIPNLVVK YCGD  +G
Subjt:  LSLFRVQYSGVLGVEEPHHQSIPNLVVKFYCGDSVLG

K7MQD0 Uncharacterized protein4.1e-0772.73Show/hide
Query:  MLFSHAFLSLFRVQYSGVLGVEEPHHQSIPNLVVKFYCGDSVLG
        +L SHAFL  F VQYS VLG+EEP HQSIPNLVVK YCG  +LG
Subjt:  MLFSHAFLSLFRVQYSGVLGVEEPHHQSIPNLVVKFYCGDSVLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTTCTCTCATGCCTTTCTTTCTTTGTTCAGGGTTCAATATTCCGGCGTCCTAGGCGTAGAGGAACCACACCACCAATCCATCCCAAACTTGGTGGTTAAATTCTA
CTGCGGTGACAGCGTCCTAGGCGTAAAGGAACTACACCAATCCATCCCAAACTTGGTGGTTAAATTCTATGGTGACGGTCCTAGGCGTAAAGGAACCACACCAATCCATC
CGAACTTGGTGGTTAAATTCTACGGTGACAATACTACATCCCGAATTTGGTGGTTAAATTCTACTACGGTGACAATATTGCAAGGCGATGATAAAAAGCTTAACACCTCT
AATTCTAAGATCTTAGAATCCACCCGAGCCTTCCATTTTTACTTCCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTTTCTCTCATGCCTTTCTTTCTTTGTTCAGGGTTCAATATTCCGGCGTCCTAGGCGTAGAGGAACCACACCACCAATCCATCCCAAACTTGGTGGTTAAATTCTA
CTGCGGTGACAGCGTCCTAGGCGTAAAGGAACTACACCAATCCATCCCAAACTTGGTGGTTAAATTCTATGGTGACGGTCCTAGGCGTAAAGGAACCACACCAATCCATC
CGAACTTGGTGGTTAAATTCTACGGTGACAATACTACATCCCGAATTTGGTGGTTAAATTCTACTACGGTGACAATATTGCAAGGCGATGATAAAAAGCTTAACACCTCT
AATTCTAAGATCTTAGAATCCACCCGAGCCTTCCATTTTTACTTCCCATAA
Protein sequenceShow/hide protein sequence
MLFSHAFLSLFRVQYSGVLGVEEPHHQSIPNLVVKFYCGDSVLGVKELHQSIPNLVVKFYGDGPRRKGTTPIHPNLVVKFYGDNTTSRIWWLNSTTVTILQGDDKKLNTS
NSKILESTRAFHFYFP