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CmoCh17G010980 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G010980
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionGlutaredoxin domain-containing protein
Genome locationCmo_Chr17:9044263..9046058
RNA-Seq ExpressionCmoCh17G010980
SyntenyCmoCh17G010980
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0097573 - glutathione oxidoreductase activity (molecular function)
InterPro domainsIPR002109 - Glutaredoxin
IPR011905 - Glutaredoxin-like, plant II
IPR014025 - Glutaredoxin subgroup
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646327.1 hypothetical protein Csa_015602 [Cucumis sativus]1.2e-6482.17Show/hide
Query:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI
        MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPA+HELDH+ANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI
Subjt:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI

Query:  WFLASSTC-KESYKLVDRIQRTTATEACLRNDSKKLYSHFHKLCKVEDTVIVFTRQT
        WFL SSTC KESYKLVDRI+RTTAT A L  DSKK+      +   E +V++F++ +
Subjt:  WFLASSTC-KESYKLVDRIQRTTATEACLRNDSKKLYSHFHKLCKVEDTVIVFTRQT

XP_008451630.1 PREDICTED: glutaredoxin-C11 [Cucumis melo]4.8e-5098.02Show/hide
Query:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI
        MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPA+HELDH+ANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI
Subjt:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI

Query:  W
        W
Subjt:  W

XP_022146613.1 glutaredoxin-C11 [Momordica charantia]2.0e-4895.05Show/hide
Query:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI
        MD LRNLASQKAVVIFSKSSCYICHS+QTLFYELG SPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIG++KDVISLHVNGDLKQMLIDAKAI
Subjt:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI

Query:  W
        W
Subjt:  W

XP_022954101.1 glutaredoxin-C11-like [Cucurbita moschata]1.6e-50100Show/hide
Query:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI
        MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI
Subjt:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI

Query:  W
        W
Subjt:  W

XP_038876720.1 glutaredoxin-C11 [Benincasa hispida]3.7e-5099.01Show/hide
Query:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI
        MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDH+ANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI
Subjt:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI

Query:  W
        W
Subjt:  W

TrEMBL top hitse value%identityAlignment
A0A0A0K7M4 Glutaredoxin domain-containing protein2.3e-5098.02Show/hide
Query:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI
        MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPA+HELDH+ANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI
Subjt:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI

Query:  W
        W
Subjt:  W

A0A1S3BRC8 glutaredoxin-C112.3e-5098.02Show/hide
Query:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI
        MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPA+HELDH+ANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI
Subjt:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI

Query:  W
        W
Subjt:  W

A0A5A7VIX0 Glutaredoxin-C11-like2.3e-5098.02Show/hide
Query:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI
        MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPA+HELDH+ANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI
Subjt:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI

Query:  W
        W
Subjt:  W

A0A6J1GPY2 glutaredoxin-C11-like8.0e-51100Show/hide
Query:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI
        MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI
Subjt:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI

Query:  W
        W
Subjt:  W

A0A6J1JXM7 glutaredoxin-C11-like isoform X28.0e-51100Show/hide
Query:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI
        MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI
Subjt:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI

Query:  W
        W
Subjt:  W

SwissProt top hitse value%identityAlignment
O23421 Monothiol glutaredoxin-S37.2e-2552.48Show/hide
Query:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI
        M+ L+ + S+K+VVIFSK+SC + H+I+TLF +LG +P I+ELD  + G+EI+ AL  LGC+P+VP VFIGG+ +G A  V+SLH+N  L  ML  A A+
Subjt:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI

Query:  W
        W
Subjt:  W

O82254 Putative glutaredoxin-C125.5e-3366.67Show/hide
Query:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWAL-RGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKA
        M+R+R+LAS+KA VIF+KSSC +CHSI+TLFYELGASPAIHELD +  G +++ AL R  G NP+VPAVF+GG+++GSAKDVIS HV+G LKQML  + A
Subjt:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWAL-RGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKA

Query:  IW
        IW
Subjt:  IW

Q8L8Z8 Monothiol glutaredoxin-S21.6e-2451.49Show/hide
Query:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI
        MD +  +  ++ VVI+SKSSC + H+I+TL  + GA+PA++ELD  + GREI+ AL  LGC+P+VP VFIGG+ +G A +V+SLH+NG L  ML  A A+
Subjt:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI

Query:  W
        W
Subjt:  W

Q9LIF1 Monothiol glutaredoxin-S101.7e-2958.42Show/hide
Query:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI
        MD +  LASQ+AVVIFSKS+C + H+I+ LFYE G SPAI E+D +  G++I+WAL  LGC+P+VPAVF+GGKF+G+A  V++LH+NG LK +L +A A+
Subjt:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI

Query:  W
        W
Subjt:  W

Q9LYC6 Glutaredoxin-C111.8e-3671.57Show/hide
Query:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG-CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKA
        M+R+R+L+S+KA VIF+KSSC +CHSI+TLFYELGASPAIHELD +  GRE++ ALR LG  NP+VPAVF+GG++IGSAKD+IS HV+G LKQML DAKA
Subjt:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG-CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKA

Query:  IW
        IW
Subjt:  IW

Arabidopsis top hitse value%identityAlignment
AT2G47870.1 Thioredoxin superfamily protein3.9e-3466.67Show/hide
Query:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWAL-RGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKA
        M+R+R+LAS+KA VIF+KSSC +CHSI+TLFYELGASPAIHELD +  G +++ AL R  G NP+VPAVF+GG+++GSAKDVIS HV+G LKQML  + A
Subjt:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWAL-RGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKA

Query:  IW
        IW
Subjt:  IW

AT3G21460.1 Glutaredoxin family protein1.2e-3058.42Show/hide
Query:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI
        MD +  LASQ+AVVIFSKS+C + H+I+ LFYE G SPAI E+D +  G++I+WAL  LGC+P+VPAVF+GGKF+G+A  V++LH+NG LK +L +A A+
Subjt:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI

Query:  W
        W
Subjt:  W

AT3G62950.1 Thioredoxin superfamily protein1.3e-3771.57Show/hide
Query:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG-CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKA
        M+R+R+L+S+KA VIF+KSSC +CHSI+TLFYELGASPAIHELD +  GRE++ ALR LG  NP+VPAVF+GG++IGSAKD+IS HV+G LKQML DAKA
Subjt:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG-CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKA

Query:  IW
        IW
Subjt:  IW

AT4G15700.1 Thioredoxin superfamily protein5.1e-2652.48Show/hide
Query:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI
        M+ L+ + S+K+VVIFSK+SC + H+I+TLF +LG +P I+ELD  + G+EI+ AL  LGC+P+VP VFIGG+ +G A  V+SLH+N  L  ML  A A+
Subjt:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI

Query:  W
        W
Subjt:  W

AT5G18600.1 Thioredoxin superfamily protein1.1e-2551.49Show/hide
Query:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI
        MD +  +  ++ VVI+SKSSC + H+I+TL  + GA+PA++ELD  + GREI+ AL  LGC+P+VP VFIGG+ +G A +V+SLH+NG L  ML  A A+
Subjt:  MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAI

Query:  W
        W
Subjt:  W


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGATTGAGAAATTTGGCATCTCAGAAAGCAGTAGTGATTTTTTCCAAGAGCTCATGCTACATATGCCATAGCATCCAGACACTCTTTTATGAGCTTGGTGCAAG
CCCTGCTATTCACGAGCTTGACCATGAAGCAAATGGGCGAGAAATTGATTGGGCTCTTAGAGGTCTAGGGTGCAACCCCTCTGTTCCAGCTGTGTTCATAGGAGGAAAAT
TTATAGGCTCAGCAAAAGATGTTATTTCTCTCCATGTTAATGGGGATCTGAAACAAATGCTGATAGATGCGAAGGCCATCTGGTTCTTAGCAAGCTCCACATGCAAGGAA
TCATACAAGTTGGTGGACAGAATACAGAGAACTACAGCCACTGAAGCCTGTCTTCGTAATGATTCAAAGAAGCTATATTCTCATTTCCACAAACTCTGCAAAGTGGAAGA
CACGGTCATTGTTTTTACACGTCAGACAAAGATTGATAGGATAAATATCGCCACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATAGATTGAGAAATTTGGCATCTCAGAAAGCAGTAGTGATTTTTTCCAAGAGCTCATGCTACATATGCCATAGCATCCAGACACTCTTTTATGAGCTTGGTGCAAG
CCCTGCTATTCACGAGCTTGACCATGAAGCAAATGGGCGAGAAATTGATTGGGCTCTTAGAGGTCTAGGGTGCAACCCCTCTGTTCCAGCTGTGTTCATAGGAGGAAAAT
TTATAGGCTCAGCAAAAGATGTTATTTCTCTCCATGTTAATGGGGATCTGAAACAAATGCTGATAGATGCGAAGGCCATCTGGTTCTTAGCAAGCTCCACATGCAAGGAA
TCATACAAGTTGGTGGACAGAATACAGAGAACTACAGCCACTGAAGCCTGTCTTCGTAATGATTCAAAGAAGCTATATTCTCATTTCCACAAACTCTGCAAAGTGGAAGA
CACGGTCATTGTTTTTACACGTCAGACAAAGATTGATAGGATAAATATCGCCACTTAA
Protein sequenceShow/hide protein sequence
MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWFLASSTCKE
SYKLVDRIQRTTATEACLRNDSKKLYSHFHKLCKVEDTVIVFTRQTKIDRINIAT