; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh17G011100 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G011100
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRNA-binding protein BRN1-like
Genome locationCmo_Chr17:9108630..9112622
RNA-Seq ExpressionCmoCh17G011100
SyntenyCmoCh17G011100
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:1990904 - ribonucleoprotein complex (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR002343 - Paraneoplastic encephalomyelitis antigen
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575869.1 RNA-binding protein BRN1, partial [Cucurbita argyrosperma subsp. sororia]4.7e-23396.08Show/hide
Query:  MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYA
        MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHMTEAQLL MFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYA
Subjt:  MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYA

Query:  DGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQK
        DGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQK
Subjt:  DGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQK

Query:  AQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPA
        AQSQASNVLNADSQRSSLFGAVPL YIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPA
Subjt:  AQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPA

Query:  VPGLQHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGEHG
        VPGLQHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCF    
Subjt:  VPGLQHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGEHG

Query:  NCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQL
                   GFVSYDSVEAAQSAISRMNGCQL
Subjt:  NCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQL

XP_022953846.1 RNA-binding protein BRN1-like [Cucurbita moschata]4.1e-24596.69Show/hide
Query:  MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYA
        MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYA
Subjt:  MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYA

Query:  DGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQK
        DGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQK
Subjt:  DGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQK

Query:  AQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPA
        AQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPA
Subjt:  AQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPA

Query:  VPGLQHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGEHG
        VPGLQHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCF    
Subjt:  VPGLQHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGEHG

Query:  NCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY
                   GFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  NCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY

XP_022991728.1 RNA-binding protein BRN1-like [Cucurbita maxima]4.7e-24195.58Show/hide
Query:  MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYA
        MAEGSGGGERKGSSQEEEDSVKLFVGQVPKH+TEAQLLAMFQE ALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYA
Subjt:  MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYA

Query:  DGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQK
        DGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQK
Subjt:  DGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQK

Query:  AQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPA
        AQSQASNVLNADSQ SSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGI PDLGPGMATRNYGMPPASYVGSAYPA
Subjt:  AQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPA

Query:  VPGLQHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGEHG
        VP LQHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCF    
Subjt:  VPGLQHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGEHG

Query:  NCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY
                   GFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  NCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY

XP_023548477.1 RNA-binding protein BRN1-like isoform X1 [Cucurbita pepo subsp. pepo]1.2e-24496.47Show/hide
Query:  MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYA
        MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYA
Subjt:  MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYA

Query:  DGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQK
        DGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQK
Subjt:  DGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQK

Query:  AQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPA
        AQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPA
Subjt:  AQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPA

Query:  VPGLQHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGEHG
        VPGLQHPM YPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCF    
Subjt:  VPGLQHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGEHG

Query:  NCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY
                   GFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  NCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY

XP_023548478.1 RNA-binding protein BRN1-like isoform X2 [Cucurbita pepo subsp. pepo]3.4e-23192.94Show/hide
Query:  MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYA
        MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYA
Subjt:  MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYA

Query:  DGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQK
        DGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQK
Subjt:  DGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQK

Query:  AQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPA
        AQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGY                QNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPA
Subjt:  AQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPA

Query:  VPGLQHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGEHG
        VPGLQHPM YPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCF    
Subjt:  VPGLQHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGEHG

Query:  NCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY
                   GFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  NCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY

TrEMBL top hitse value%identityAlignment
A0A0A0K5R5 Uncharacterized protein4.6e-22690.79Show/hide
Query:  MAEGSGGGERKGSS-QEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKY
        MAEGS GGERK SS QEEEDSVKLFVGQVPKHMTE QLL MFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKA+NACHNKKTLPGASSPLQVKY
Subjt:  MAEGSGGGERKGSS-QEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKY

Query:  ADGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQ
        ADGELERLEHKLFIGMLPKNVSEDEVS LFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGK KMEGSSVPLVVKWADTEKERQARKAQ
Subjt:  ADGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQ

Query:  KAQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYP
        KAQSQA+NVLNADSQ  SLFGA+PLGY+PPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNY MPPASY  SAYP
Subjt:  KAQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYP

Query:  AVPGLQHPMAYPGGMMSPGVVSSS--PGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFG
         VP LQHPMAYPGGMMSPGVVSSS  PGPFTGG  NSPTSS+GKGSG QIEGPPGANLFIYHIPQEFGD ELANSFRAFGRVLSAKVFVDKTSGVSKCF 
Subjt:  AVPGLQHPMAYPGGMMSPGVVSSS--PGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFG

Query:  EHGNCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY
                      GFVSYDS EAAQSAIS MNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  EHGNCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY

A0A1S3BRF9 RNA-binding protein BRN14.6e-22690.79Show/hide
Query:  MAEGSGGGERKGSS-QEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKY
        MAEGS GGERK SS QEEEDSVKLFVGQVPKHMTE QLL MFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKA+NACHNKKTLPGASSPLQVKY
Subjt:  MAEGSGGGERKGSS-QEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKY

Query:  ADGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQ
        ADGELERLEHKLFIGMLPKNVSEDEVS LFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGK KMEGSSVPLVVKWADTEKERQARKAQ
Subjt:  ADGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQ

Query:  KAQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYP
        KAQSQA+NVLNADSQ  SLFGA+PLGY+PPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNY MPPASY  SAYP
Subjt:  KAQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYP

Query:  AVPGLQHPMAYPGGMMSPGVVSSS--PGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFG
         VP LQHPMAYPGGMMSPGVVSSS  PGPFTGG  NSPTSS+GKGSG QIEGPPGANLFIYHIPQEFGD ELANSFRAFGRVLSAKVFVDKTSGVSKCF 
Subjt:  AVPGLQHPMAYPGGMMSPGVVSSS--PGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFG

Query:  EHGNCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY
                      GFVSYDS EAAQSAIS MNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  EHGNCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY

A0A6J1DAN8 RNA-binding protein BRN11.6e-22388.57Show/hide
Query:  MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYA
        MAEG      + +SQEEEDSVKLFVGQVPKHM+E QLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKA+NACHNKKTLPGASSPLQVKYA
Subjt:  MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYA

Query:  DGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQK
        DGELERLEHKLFIGMLPKNVSED+VS LFSQYGTIKDLQILRGSQQTSKGCAFLKYETK+QAVAALEAINGK+KMEGSSVPLVVKWADTEKERQARKAQK
Subjt:  DGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQK

Query:  AQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPA
        AQSQ SNVLNADSQ  SLFGA+PLGY+PPYNG+GYQAPGSYGLMQYHLPP+QNQSGF NMIPQLNQGNAMRGIPPDLGPGMA RNYGMPPASYVGSAYP 
Subjt:  AQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPA

Query:  VPGLQHPMAYPGGMMSPGVVSSSPGP--FTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGE
        VPGLQHPMAYPGGMMSPGVVSSSPG    TGG +NSPTSSLGKGSG QIEGPPGANLFIYHIPQEFGD ELANSFRA+GRVLSAKVFVDKTSGVSKCF  
Subjt:  VPGLQHPMAYPGGMMSPGVVSSSPGP--FTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGE

Query:  HGNCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY
                     GFVSYDS EAAQSAIS MNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  HGNCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY

A0A6J1GP82 RNA-binding protein BRN1-like2.0e-24596.69Show/hide
Query:  MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYA
        MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYA
Subjt:  MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYA

Query:  DGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQK
        DGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQK
Subjt:  DGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQK

Query:  AQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPA
        AQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPA
Subjt:  AQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPA

Query:  VPGLQHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGEHG
        VPGLQHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCF    
Subjt:  VPGLQHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGEHG

Query:  NCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY
                   GFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  NCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY

A0A6J1JX41 RNA-binding protein BRN1-like2.3e-24195.58Show/hide
Query:  MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYA
        MAEGSGGGERKGSSQEEEDSVKLFVGQVPKH+TEAQLLAMFQE ALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYA
Subjt:  MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYA

Query:  DGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQK
        DGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQK
Subjt:  DGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQK

Query:  AQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPA
        AQSQASNVLNADSQ SSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGI PDLGPGMATRNYGMPPASYVGSAYPA
Subjt:  AQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPA

Query:  VPGLQHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGEHG
        VP LQHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCF    
Subjt:  VPGLQHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGEHG

Query:  NCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY
                   GFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  NCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY

SwissProt top hitse value%identityAlignment
A0JM51 CUGBP Elav-like family member 53.8e-6836.17Show/hide
Query:  RKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLEH
        ++  S ++ D++KLFVGQ+P+++ E  L  +F++F  + E+ +++D+ T   +GC F+   +R  A KA  A H +KTLPG + P+QVK AD E    + 
Subjt:  RKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLEH

Query:  KLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARK------------
        KLF+GML K  SE+EV+S+F  +G+I++  +LRG   +SKGCAF+K+ +  +A AA++A++G   M G+S  LVVK+ADT+KER  R+            
Subjt:  KLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARK------------

Query:  -------------AQKAQSQASNVLNADS----QRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPG
                     AQ    Q + VL+         S  F +  +  I   N  G  A         H PP+   +  P ++  L  G       P   P 
Subjt:  -------------AQKAQSQASNVLNADS----QRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPG

Query:  MAT--RNYGMP-----PASYVGSAYPAVPGLQHPMA-YPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANS
        + T   N  +P     PA  V S +P+  G+Q   A YP   ++P V  S+P P        P          Q EGP G NLFIYH+PQEFGD EL   
Subjt:  MAT--RNYGMP-----PASYVGSAYPAVPGLQHPMA-YPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANS

Query:  FRAFGRVLSAKVFVDKTSGVSKCFGEHGNCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY
        F  FG ++S+KVF+D+ +  SKCF               GFVS+D+  +AQ+AI  MNG Q+G K+LKVQLKR    ++PY
Subjt:  FRAFGRVLSAKVFVDKTSGVSKCFGEHGNCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY

Q08E07 CUGBP Elav-like family member 36.1e-6635.76Show/hide
Query:  EEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLEHKLFIGM
        +E D++KLFVGQ+P+H+ E  L  +F++F  + E+ +I+DK T   +GC F+   +R  A KA +A H +KTLPG + P+QVK AD E    + KLF+GM
Subjt:  EEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLEHKLFIGM

Query:  LPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQA----------
        L K  ++++V  +F  +GTI +  +LRG   TSKGCAF+K++T  +A AA+  ++    + G+S  LVVK+ADTEKER  R+ Q+  +Q           
Subjt:  LPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQA----------

Query:  ---SNVLNADSQRSSLFGAVPLGYIPPYNGYG------YQAPGSYGLMQYHLPPMQNQSGFP-------NMIPQLNQGNAMRGIP--------PD-LGPG
           S    A  Q+ +   A    Y+ P             A  + GL+   + P    S  P       + IP     N    +P        PD L P 
Subjt:  ---SNVLNADSQRSSLFGAVPLGYIPPYNGYG------YQAPGSYGLMQYHLPPMQNQSGFP-------NMIPQLNQGNAMRGIP--------PD-LGPG

Query:  MATRNYGMPPASYVGSAYPAVPGLQHPMAYPGGM--------MSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANS
                 PA+ V     A  G+QH  AYP             P +V+  P P                   Q EGP G N+FIYH+PQEF D E+   
Subjt:  MATRNYGMPPASYVGSAYPAVPGLQHPMAYPGGM--------MSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANS

Query:  FRAFGRVLSAKVFVDKTSGVSKCFGEHGNCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY
        F  FG V+SAKVFVD+ +  SKCF               GFVS+D+  +AQ+AI  MNG Q+G K+LKVQLKR    ++PY
Subjt:  FRAFGRVLSAKVFVDKTSGVSKCFGEHGNCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY

Q6P0B1 CUGBP Elav-like family member 24.7e-6635.64Show/hide
Query:  GSGGGERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTR--ASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYAD
        G   G  + S Q + D++K+FVGQ+P+  +E +L  +F+ +  V ++NI+RD++     S+GCCFV   +R+ A +A NA HN KTL G   P+Q+K AD
Subjt:  GSGGGERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTR--ASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYAD

Query:  GELERL--EHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQ
         E      + KLFIGM+ K  +E+++  +FS YG I++ +ILRG    S+GCAF+ + T+  A  A++A++    MEG S P+VVK+ADT+K+++ R+ Q
Subjt:  GELERL--EHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQ

Query:  KAQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQY---------HLPPMQN------------QSGFPNMIPQLNQGNAMRGIPPDLG
        +  +Q    LN+ S   SL G    G  P Y     QA  S  L  +         +   +QN             S  P+    L       G      
Subjt:  KAQSQASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQY---------HLPPMQN------------QSGFPNMIPQLNQGNAMRGIPPDLG

Query:  PGMATRNYGMPPASYVGSA------------YPAVPGLQHPM-AYPGGMMSPGVVSSSPGPFT------GGNNNSPTSSL-----------GKGSGSQIE
           A  +  M     +G+               A+ G  + M A  GG+ S G+ + S GP         G      ++L              +GSQ E
Subjt:  PGMATRNYGMPPASYVGSA------------YPAVPGLQHPM-AYPGGMMSPGVVSSSPGPFT------GGNNNSPTSSL-----------GKGSGSQIE

Query:  GPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGEHGNCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNK
        GP GANLFIYH+PQEFGD ++   F  FG V+SAKVF+DK + +SKCF               GFVSYD+  +AQ+AI  MNG Q+G K+LKVQLKR   
Subjt:  GPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGEHGNCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNK

Query:  QSKPY
         SKPY
Subjt:  QSKPY

Q8GZ26 RNA-binding protein BRN24.0e-14261.12Show/hide
Query:  SQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLEHKLFI
        + E E+ VKLFVGQVPKHMTE QLL +F+EF++V+EVNII++KTTRA RGCCF+ CP+R++ADK IN+ HNKKTLPGASSPLQVKYADGELERLEHKLF+
Subjt:  SQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLEHKLFI

Query:  GMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNVLNADS
        GMLPKNVSE EV SLFS+YGTIKDLQILRGS QTSKGC FLKYE+K+QAVAA+EA+NG+H MEG++VPL+VKWADTEKERQAR+  K QS  S +   D 
Subjt:  GMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNVLNADS

Query:  QRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGNAMRG------IPPDLGPGMATRNYGMPPASYVGSAYPAVPGLQH
        Q  S+FGA+P+ Y+PPYNGYGY  PG+YG   Y LPP+Q Q  F N+I P    G A++G      +PP L P    RN+     +Y         GLQ+
Subjt:  QRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGNAMRG------IPPDLGPGMATRNYGMPPASYVGSAYPAVPGLQH

Query:  PMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGEHGNCSRLT
        PMA+P GM+ P +  ++  P    N  S  SSL      Q EGP GANLFIY+IP+EF D ELA +F+ FG+VLSAKVFVDK +G+SKCF          
Subjt:  PMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGEHGNCSRLT

Query:  LLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSK
             GF+SYDS  AAQ+AI+ MNGCQL GKKLKVQLKRDN Q +
Subjt:  LLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSK

Q8LFS6 RNA-binding protein BRN12.5e-16066.74Show/hide
Query:  ERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLE
        E      EEE+SVKLFVGQ+PKHM+E+QLL +FQEFA+VDEVNII+DK TRASRGCCF++CPSR+EADK +NACHNKKTLPGA+S LQVKYADGELERLE
Subjt:  ERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLE

Query:  HKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNV
        HKLF+GMLPKNVSE EV SLFS+YGTIKDLQILRG+QQTSKGCAFLKYETK+QAV+A+E+INGKHKMEGS+VPLVVKWADTE+ER  R+ QKAQS  + +
Subjt:  HKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNV

Query:  LNADSQRSSLFGAVPLGYIPPYNGYGY-QAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--NAMRGIPPD-LGPGMATRNYGMPPASYVGSAYPAVPGL
         N D    SLFGA+P+GY+PPYNGYGY Q PG+YG   Y LPP+QNQ+ F NMI Q NQG  NA++G  PD + P +A RN+ MPP +Y+GS YPA+ G 
Subjt:  LNADSQRSSLFGAVPLGYIPPYNGYGY-QAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--NAMRGIPPD-LGPGMATRNYGMPPASYVGSAYPAVPGL

Query:  QHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGEHGNCSR
          P AYP G++SP  +SSSPG  + G   S    +G  S  Q EGP GANLFIY+IP+EFGD ELA +F++FG VLSAKVFVDK +GVSKCF        
Subjt:  QHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGEHGNCSR

Query:  LTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKP
               GFVSYDS  AAQ+AI  MNG  LGGKKLKVQLKRD+   +P
Subjt:  LTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKP

Arabidopsis top hitse value%identityAlignment
AT1G03457.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.8e-14361.12Show/hide
Query:  SQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLEHKLFI
        + E E+ VKLFVGQVPKHMTE QLL +F+EF++V+EVNII++KTTRA RGCCF+ CP+R++ADK IN+ HNKKTLPGASSPLQVKYADGELERLEHKLF+
Subjt:  SQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLEHKLFI

Query:  GMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNVLNADS
        GMLPKNVSE EV SLFS+YGTIKDLQILRGS QTSKGC FLKYE+K+QAVAA+EA+NG+H MEG++VPL+VKWADTEKERQAR+  K QS  S +   D 
Subjt:  GMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNVLNADS

Query:  QRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGNAMRG------IPPDLGPGMATRNYGMPPASYVGSAYPAVPGLQH
        Q  S+FGA+P+ Y+PPYNGYGY  PG+YG   Y LPP+Q Q  F N+I P    G A++G      +PP L P    RN+     +Y         GLQ+
Subjt:  QRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGNAMRG------IPPDLGPGMATRNYGMPPASYVGSAYPAVPGLQH

Query:  PMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGEHGNCSRLT
        PMA+P GM+ P +  ++  P    N  S  SSL      Q EGP GANLFIY+IP+EF D ELA +F+ FG+VLSAKVFVDK +G+SKCF          
Subjt:  PMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGEHGNCSRLT

Query:  LLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSK
             GF+SYDS  AAQ+AI+ MNGCQL GKKLKVQLKRDN Q +
Subjt:  LLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSK

AT1G03457.2 RNA-binding (RRM/RBD/RNP motifs) family protein5.9e-14159.91Show/hide
Query:  SQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERL------
        + E E+ VKLFVGQVPKHMTE QLL +F+EF++V+EVNII++KTTRA RGCCF+ CP+R++ADK IN+ HNKKTLPGASSPLQVKYADGELERL      
Subjt:  SQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERL------

Query:  ---EHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQ
           EHKLF+GMLPKNVSE EV SLFS+YGTIKDLQILRGS QTSKGC FLKYE+K+QAVAA+EA+NG+H MEG++VPL+VKWADTEKERQAR+  K QS 
Subjt:  ---EHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQ

Query:  ASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGNAMRG------IPPDLGPGMATRNYGMPPASYVGSA
         S +   D Q  S+FGA+P+ Y+PPYNGYGY  PG+YG   Y LPP+Q Q  F N+I P    G A++G      +PP L P    RN+     +Y    
Subjt:  ASNVLNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGNAMRG------IPPDLGPGMATRNYGMPPASYVGSA

Query:  YPAVPGLQHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFG
             GLQ+PMA+P GM+ P +  ++  P    N  S  SSL      Q EGP GANLFIY+IP+EF D ELA +F+ FG+VLSAKVFVDK +G+SKCF 
Subjt:  YPAVPGLQHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFG

Query:  EHGNCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSK
                      GF+SYDS  AAQ+AI+ MNGCQL GKKLKVQLKRDN Q +
Subjt:  EHGNCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSK

AT4G03110.1 RNA-binding protein-defense related 11.8e-16166.74Show/hide
Query:  ERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLE
        E      EEE+SVKLFVGQ+PKHM+E+QLL +FQEFA+VDEVNII+DK TRASRGCCF++CPSR+EADK +NACHNKKTLPGA+S LQVKYADGELERLE
Subjt:  ERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLE

Query:  HKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNV
        HKLF+GMLPKNVSE EV SLFS+YGTIKDLQILRG+QQTSKGCAFLKYETK+QAV+A+E+INGKHKMEGS+VPLVVKWADTE+ER  R+ QKAQS  + +
Subjt:  HKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNV

Query:  LNADSQRSSLFGAVPLGYIPPYNGYGY-QAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--NAMRGIPPD-LGPGMATRNYGMPPASYVGSAYPAVPGL
         N D    SLFGA+P+GY+PPYNGYGY Q PG+YG   Y LPP+QNQ+ F NMI Q NQG  NA++G  PD + P +A RN+ MPP +Y+GS YPA+ G 
Subjt:  LNADSQRSSLFGAVPLGYIPPYNGYGY-QAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--NAMRGIPPD-LGPGMATRNYGMPPASYVGSAYPAVPGL

Query:  QHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGEHGNCSR
          P AYP G++SP  +SSSPG  + G   S    +G  S  Q EGP GANLFIY+IP+EFGD ELA +F++FG VLSAKVFVDK +GVSKCF        
Subjt:  QHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGEHGNCSR

Query:  LTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKP
               GFVSYDS  AAQ+AI  MNG  LGGKKLKVQLKRD+   +P
Subjt:  LTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKP

AT4G03110.2 RNA-binding protein-defense related 13.1e-15068.7Show/hide
Query:  ERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLE
        E      EEE+SVKLFVGQ+PKHM+E+QLL +FQEFA+VDEVNII+DK TRASRGCCF++CPSR+EADK +NACHNKKTLPGA+S LQVKYADGELERLE
Subjt:  ERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLE

Query:  HKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNV
        HKLF+GMLPKNVSE EV SLFS+YGTIKDLQILRG+QQTSKGCAFLKYETK+QAV+A+E+INGKHKMEGS+VPLVVKWADTE+ER  R+ QKAQS  + +
Subjt:  HKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNV

Query:  LNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--NAMRGIPPD-LGPGMATRNYGMPPASYVGSAYPAVPGLQ
         N D    SLFGA+P+GY+PPYNGYGY  PG+YG   Y LPP+QNQ+ F NMI Q NQG  NA++G  PD + P +A RN+ MPP +Y+GS YPA+ G  
Subjt:  LNADSQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--NAMRGIPPD-LGPGMATRNYGMPPASYVGSAYPAVPGLQ

Query:  HPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGE
         P AYP G++SP  +SSSPG  + G   S    +G  S  Q EGP GANLFIY+IP+EFGD ELA +F++FG VLSAKVFVDK +GVSKCFG+
Subjt:  HPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGE

AT4G16280.2 RNA binding;abscisic acid binding1.0e-3935.18Show/hide
Query:  EEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELER---LEHKLF
        +   +VKLFVG VP+  TE ++   F++   V EV +I+DK T   +GCCFV   + ++AD+AI A HN+ TLPG + P+QV+YADGE ER   LE KLF
Subjt:  EEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELER---LEHKLF

Query:  IGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNVLNAD
        +G L K  +E EV  +F Q+G ++D+ ++R   + S+GC F+KY +K+ A+AA++ +NG + M G + PL+V++A+ ++ +     + A           
Subjt:  IGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNVLNAD

Query:  SQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQ---YHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLG--PGMAT--RNYGMPPASYVGSAYPAVPGLQ
                 V LG  P +   G +   ++G       H  P +  +   N+ P  N G  +RG   D    PG AT   N G P   Y       VP L 
Subjt:  SQRSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQ---YHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLG--PGMAT--RNYGMPPASYVGSAYPAVPGLQ

Query:  HPMAYPG
        +P+  PG
Subjt:  HPMAYPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGGGGAGTGGAGGAGGAGAGAGAAAGGGGAGTAGTCAGGAGGAGGAAGACAGCGTCAAACTCTTTGTTGGTCAAGTGCCGAAGCATATGACCGAAGCTCAACT
TCTCGCAATGTTCCAAGAGTTTGCACTTGTGGACGAGGTCAACATCATCAGAGACAAAACCACTCGCGCCTCTAGAGGTTGCTGTTTTGTGATATGTCCTTCGAGGCAGG
AGGCGGATAAGGCGATCAATGCTTGCCATAACAAGAAAACTTTACCTGGGGCTTCTAGTCCGTTGCAAGTAAAATATGCAGATGGCGAGCTGGAAAGACTAGAACACAAA
CTCTTCATTGGAATGCTTCCAAAAAATGTATCTGAAGATGAAGTTTCTAGTCTTTTCTCTCAATATGGAACTATAAAAGACTTGCAAATATTAAGAGGTTCGCAGCAGAC
AAGTAAAGGTTGTGCATTCTTGAAGTATGAGACGAAGGATCAAGCTGTTGCAGCACTTGAGGCAATTAATGGAAAGCATAAAATGGAGGGATCCAGTGTCCCTTTGGTTG
TTAAATGGGCTGACACAGAGAAGGAAAGGCAAGCTCGGAAAGCTCAGAAAGCTCAATCACAGGCCTCTAATGTGCTTAATGCTGACTCTCAACGCTCTTCGCTGTTTGGA
GCCGTGCCACTGGGTTATATTCCACCATATAATGGCTATGGTTATCAGGCTCCTGGAAGTTATGGGCTTATGCAGTATCATCTACCTCCAATGCAGAATCAATCTGGTTT
TCCCAATATGATACCCCAGTTAAACCAAGGAAATGCAATGCGTGGGATCCCACCCGACCTTGGCCCAGGTATGGCCACTAGAAATTATGGCATGCCTCCTGCAAGTTACG
TTGGCTCTGCGTATCCTGCAGTTCCAGGTCTTCAGCATCCCATGGCATACCCTGGAGGAATGATGAGTCCTGGGGTTGTGAGCAGTTCACCTGGGCCATTTACTGGTGGT
AACAATAACTCTCCAACGTCTAGTTTGGGTAAAGGCTCTGGGAGTCAGATTGAAGGTCCACCTGGTGCTAATCTTTTTATTTATCACATACCTCAAGAATTTGGTGATCT
GGAGCTTGCTAATTCTTTTCGAGCATTTGGTCGAGTTTTGAGTGCTAAAGTATTTGTTGACAAAACATCTGGAGTTAGCAAATGTTTTGGTGAGCACGGTAACTGTAGCC
GTCTAACCTTGCTCCATCTTACAGGATTTGTTAGTTATGATTCAGTCGAGGCTGCTCAATCTGCCATAAGTAGGATGAATGGATGCCAATTAGGTGGAAAGAAATTAAAA
GTCCAGCTGAAGAGAGACAACAAACAAAGCAAACCATATTGA
mRNA sequenceShow/hide mRNA sequence
TTTCTCTGCGAAGACTTTCAGAAGGAAAATCCAATACCAGAGAGAGAAGCGACGGCGAAAACTAGAGAGAGACAGACACAGAGCAGAGAGAGAGAGAGAGAGGTTTTCCA
GAGAGAGAAAGCTTGAAACCGGCATTAATGGCGGAGGGGAGTGGAGGAGGAGAGAGAAAGGGGAGTAGTCAGGAGGAGGAAGACAGCGTCAAACTCTTTGTTGGTCAAGT
GCCGAAGCATATGACCGAAGCTCAACTTCTCGCAATGTTCCAAGAGTTTGCACTTGTGGACGAGGTCAACATCATCAGAGACAAAACCACTCGCGCCTCTAGAGGTTGCT
GTTTTGTGATATGTCCTTCGAGGCAGGAGGCGGATAAGGCGATCAATGCTTGCCATAACAAGAAAACTTTACCTGGGGCTTCTAGTCCGTTGCAAGTAAAATATGCAGAT
GGCGAGCTGGAAAGACTAGAACACAAACTCTTCATTGGAATGCTTCCAAAAAATGTATCTGAAGATGAAGTTTCTAGTCTTTTCTCTCAATATGGAACTATAAAAGACTT
GCAAATATTAAGAGGTTCGCAGCAGACAAGTAAAGGTTGTGCATTCTTGAAGTATGAGACGAAGGATCAAGCTGTTGCAGCACTTGAGGCAATTAATGGAAAGCATAAAA
TGGAGGGATCCAGTGTCCCTTTGGTTGTTAAATGGGCTGACACAGAGAAGGAAAGGCAAGCTCGGAAAGCTCAGAAAGCTCAATCACAGGCCTCTAATGTGCTTAATGCT
GACTCTCAACGCTCTTCGCTGTTTGGAGCCGTGCCACTGGGTTATATTCCACCATATAATGGCTATGGTTATCAGGCTCCTGGAAGTTATGGGCTTATGCAGTATCATCT
ACCTCCAATGCAGAATCAATCTGGTTTTCCCAATATGATACCCCAGTTAAACCAAGGAAATGCAATGCGTGGGATCCCACCCGACCTTGGCCCAGGTATGGCCACTAGAA
ATTATGGCATGCCTCCTGCAAGTTACGTTGGCTCTGCGTATCCTGCAGTTCCAGGTCTTCAGCATCCCATGGCATACCCTGGAGGAATGATGAGTCCTGGGGTTGTGAGC
AGTTCACCTGGGCCATTTACTGGTGGTAACAATAACTCTCCAACGTCTAGTTTGGGTAAAGGCTCTGGGAGTCAGATTGAAGGTCCACCTGGTGCTAATCTTTTTATTTA
TCACATACCTCAAGAATTTGGTGATCTGGAGCTTGCTAATTCTTTTCGAGCATTTGGTCGAGTTTTGAGTGCTAAAGTATTTGTTGACAAAACATCTGGAGTTAGCAAAT
GTTTTGGTGAGCACGGTAACTGTAGCCGTCTAACCTTGCTCCATCTTACAGGATTTGTTAGTTATGATTCAGTCGAGGCTGCTCAATCTGCCATAAGTAGGATGAATGGA
TGCCAATTAGGTGGAAAGAAATTAAAAGTCCAGCTGAAGAGAGACAACAAACAAAGCAAACCATATTGA
Protein sequenceShow/hide protein sequence
MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLEHK
LFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNVLNADSQRSSLFG
AVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPAVPGLQHPMAYPGGMMSPGVVSSSPGPFTGG
NNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGEHGNCSRLTLLHLTGFVSYDSVEAAQSAISRMNGCQLGGKKLK
VQLKRDNKQSKPY